Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:16:10 (3360597): wrapper (7.7.26015): starting
21:16:10 (3360597): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 21:16:10] Arguments: --nthreads 12
[2025-05-28 21:16:10] Threads: 12
[2025-05-28 21:16:10] Checking for CVMFS
[2025-05-28 21:16:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 21:16:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 21:16:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 21:16:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 21:16:12] 2.11.5.0 3603591 14509 231252 146542 0 449 28988800 45568000 18427 130560 0 147809983 99.818 84052430 27918 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 21:16:12] CVMFS is ok
[2025-05-28 21:16:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 21:16:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 21:16:12] Further information can be found at the LHC@home message board.
[2025-05-28 21:16:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 21:16:12] Checking for apptainer binary...
[2025-05-28 21:16:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 21:16:12] Running /usr/bin/apptainer --version
[2025-05-28 21:16:12] apptainer version 1.4.0-1.el9
[2025-05-28 21:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 21:16:13] wns0063.triumf.lcg
[2025-05-28 21:16:13] apptainer works
[2025-05-28 21:16:14] Set ATHENA_PROC_NUMBER=12
[2025-05-28 21:16:14] Set ATHENA_CORE_NUMBER=12
[2025-05-28 21:16:14] Starting ATLAS job with PandaID=6669088855
[2025-05-28 21:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 21:21:47]  *** The last 200 lines of the pilot log: ***
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | WARNING  | wrong length of table data, x=[1748492307.0], y=[2207.0] (must be same and length>=4)
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . Timing measurements:
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . get job = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . initial setup = 5 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . payload setup = 30 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . stage-in = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . payload execution = 69 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . stage-out = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . log creation = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669088855/pilotlog.txt
[2025-05-28 21:21:47] 2025-05-29 04:21:32,005 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 21:21:47] - Log from pilotlog.txt -
[2025-05-28 21:21:47] 2025-05-29 04:21:31,880 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 21:21:47] 2025-05-29 04:21:31,900 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6669088855/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | INFO     | extracted standard info from prmon json
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | WARNING  | wrong length of table data, x=[1748492307.0], y=[2207.0] (must be same and length>=4)
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . Timing measurements:
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . get job = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . initial setup = 5 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . payload setup = 30 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . stage-in = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . payload execution = 69 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . stage-out = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . log creation = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669088855/pilotlog.txt
[2025-05-28 21:21:47] 2025-05-29 04:21:32,006 | WARNING  | 
[2025-05-28 21:21:47] [begin log extracts]
[2025-05-28 21:21:47] - Log from pilotlog.txt -
[2025-05-28 21:21:47] 2025-05-29 04:21:31,880 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 21:21:47] 2025-05-29 04:21:31,900 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6669088855/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | INFO     | extracted standard info from prmon json
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:21:47] 2025-05-29 04:21:31,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | WARNING  | wrong length of table data, x=[1748492307.0], y=[2207.0] (must be same and length>=4)
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . Timing measurements:
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . get job = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . initial setup = 5 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . payload setup = 30 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,902 | INFO     | . stage-in = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . payload execution = 69 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . stage-out = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | . log creation = 0 s
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | ..............................
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:21:47] 2025-05-29 04:21:31,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669088855/pilotlog.txt
[2025-05-28 21:21:47] [end log extracts]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,006 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 21:21:47] 2025-05-29 04:21:32,007 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | 
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | job summary report
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | --------------------------------------------------
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | PanDA job id: 6669088855
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | task id: 44871837
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 21:19:01,986 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | pilot state: failed 
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | transexitcode: 65
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | exeerrorcode: 65
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | exitcode: 65
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | cpuconsumptiontime: 17 s
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | nevents: 0
[2025-05-28 21:21:47] 2025-05-29 04:21:32,063 | INFO     | neventsw: 0
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | pid: 3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | pgrp: 3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | corecount: 12
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | event service: False
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | sizes: {0: 2405231, 1: 2405231, 12: 2405259, 21: 2405493, 23: 2405521, 103: 2428810, 104: 2433045, 106: 2433073, 243: 2433215}
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | --------------------------------------------------
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | 
[2025-05-28 21:21:47] 2025-05-29 04:21:32,064 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | job 6669088855 has completed (purged errors)
[2025-05-28 21:21:47] 2025-05-29 04:21:32,119 | INFO     | overall cleanup function is called
[2025-05-28 21:21:47] 2025-05-29 04:21:32,646 | INFO     | PID=3364177 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-28 21:21:47] 2025-05-29 04:21:32,646 | INFO     | .. there are 28 such processes running
[2025-05-28 21:21:47] 2025-05-29 04:21:33,126 | INFO     | --- collectZombieJob: --- 10, [3380200]
[2025-05-28 21:21:47] 2025-05-29 04:21:33,126 | INFO     | zombie collector waiting for pid 3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:33,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 21:21:47] 2025-05-29 04:21:33,126 | INFO     | collected zombie processes
[2025-05-28 21:21:47] 2025-05-29 04:21:33,126 | INFO     | will attempt to kill all subprocesses of pid=3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:33,469 | INFO     | process IDs to be killed: [3380200] (in reverse order)
[2025-05-28 21:21:47] 2025-05-29 04:21:33,898 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 21:21:47] 2025-05-29 04:21:33,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 21:21:47] 2025-05-29 04:21:33,940 | INFO     | did not find any defunct processes belonging to 3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:33,990 | INFO     | did not find any defunct processes belonging to 3380200
[2025-05-28 21:21:47] 2025-05-29 04:21:33,990 | INFO     | ready for new job
[2025-05-28 21:21:47] 2025-05-29 04:21:33,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 21:21:47] 2025-05-29 04:21:33,991 | INFO     | **************************************
[2025-05-28 21:21:47] 2025-05-29 04:21:33,991 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 21:21:47] 2025-05-29 04:21:33,991 | INFO     | **************************************
[2025-05-28 21:21:47] 2025-05-29 04:21:34,015 | INFO     | 
[2025-05-28 21:21:47] 2025-05-29 04:21:34,017 | INFO     | architecture information:
[2025-05-28 21:21:47] 2025-05-29 04:21:34,037 | INFO     | executing command: cat /etc/os-release
[2025-05-28 21:21:47] 2025-05-29 04:21:34,140 | INFO     | cat /etc/os-release:
[2025-05-28 21:21:47] NAME="CentOS Linux"
[2025-05-28 21:21:47] VERSION="7 (Core)"
[2025-05-28 21:21:47] ID="centos"
[2025-05-28 21:21:47] ID_LIKE="rhel fedora"
[2025-05-28 21:21:47] VERSION_ID="7"
[2025-05-28 21:21:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 21:21:47] ANSI_COLOR="0;31"
[2025-05-28 21:21:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 21:21:47] HOME_URL="https://www.centos.org/"
[2025-05-28 21:21:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 21:21:47] 
[2025-05-28 21:21:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 21:21:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 21:21:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 21:21:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 21:21:47] 
[2025-05-28 21:21:47] 2025-05-29 04:21:34,140 | INFO     | **************************************
[2025-05-28 21:21:47] 2025-05-29 04:21:34,644 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 21:21:47] 2025-05-29 04:21:34,744 | INFO     | sufficient remaining disk space (1773430374400 B)
[2025-05-28 21:21:47] 2025-05-29 04:21:34,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 21:21:47] 2025-05-29 04:21:34,744 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 21:21:47] 2025-05-29 04:21:34,744 | INFO     | update_server=False
[2025-05-28 21:21:47] 2025-05-29 04:21:34,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 21:21:47] 2025-05-29 04:21:34,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 21:21:47] 2025-05-29 04:21:34,746 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 21:21:47] 2025-05-29 04:21:34,746 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 21:21:47] 2025-05-29 04:21:34,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 21:21:47] 2025-05-29 04:21:34,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 21:21:47] 2025-05-29 04:21:34,807 | INFO     | all payload control threads have been joined
[2025-05-28 21:21:47] 2025-05-29 04:21:34,922 | INFO     | all data control threads have been joined
[2025-05-28 21:21:47] 2025-05-29 04:21:35,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:21:47] 2025-05-29 04:21:35,178 | INFO     | aborting loop
[2025-05-28 21:21:47] 2025-05-29 04:21:35,751 | INFO     | [job] retrieve thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:35,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:35,813 | INFO     | [payload] control thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:35,928 | INFO     | [data] control thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,103 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,124 | INFO     | all job control threads have been joined
[2025-05-28 21:21:47] 2025-05-29 04:21:36,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 21:21:47] 2025-05-29 04:21:36,184 | INFO     | [job] job monitor thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,232 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,260 | INFO     | [data] copytool_in thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,263 | INFO     | [payload] failed_post thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,282 | INFO     | [job] validate thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,292 | INFO     | [payload] validate_post thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,588 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:36,753 | INFO     | [data] copytool_out thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:37,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:21:47] 2025-05-29 04:21:37,130 | INFO     | [job] control thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:38,098 | INFO     | [job] queue monitor thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:40,164 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 21:21:47] 2025-05-29 04:21:41,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664308504384)>', '<ExcThread(monitor, started 140663777642240)>']
[2025-05-28 21:21:47] 2025-05-29 04:21:41,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 21:21:47] 2025-05-29 04:21:41,817 | INFO     | [monitor] control thread has ended
[2025-05-28 21:21:47] 2025-05-29 04:21:46,295 | INFO     | all workflow threads have been joined
[2025-05-28 21:21:47] 2025-05-29 04:21:46,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 21:21:47] 2025-05-29 04:21:46,295 | INFO     | traces error code: 0
[2025-05-28 21:21:47] 2025-05-29 04:21:46,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 21:21:47] 2025-05-29 04:21:46,512 [wrapper] ==== pilot stdout END ====
[2025-05-28 21:21:47] 2025-05-29 04:21:46,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 21:21:47] 2025-05-29 04:21:46,572 [wrapper] pilotpid: 3364177
[2025-05-28 21:21:47] 2025-05-29 04:21:46,594 [wrapper] Pilot exit status: 0
[2025-05-28 21:21:47] 2025-05-29 04:21:46,715 [wrapper] pandaids: 6669088855
[2025-05-28 21:21:47] 2025-05-29 04:21:46,785 [wrapper] cleanup supervisor_pilot 3364183 3364178
[2025-05-28 21:21:47] 2025-05-29 04:21:46,797 [wrapper] Test setup, not cleaning
[2025-05-28 21:21:47] 2025-05-29 04:21:46,837 [wrapper] apfmon messages muted
[2025-05-28 21:21:47] 2025-05-29 04:21:46,871 [wrapper] ==== wrapper stdout END ====
[2025-05-28 21:21:47] 2025-05-29 04:21:46,912 [wrapper] ==== wrapper stderr END ====
[2025-05-28 21:21:47]  *** Error codes and diagnostics ***
[2025-05-28 21:21:47]     "exeErrorCode": 65,
[2025-05-28 21:21:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 21:21:47]     "pilotErrorCode": 1305,
[2025-05-28 21:21:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 21:21:47]  *** Listing of results directory ***
[2025-05-28 21:21:47] total 222464
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc    495897 May 28 17:49 pilot3.tar.gz
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc      5111 May 28 17:59 queuedata.json
[2025-05-28 21:21:47] -rwx------. 1 boinc boinc     37140 May 28 18:00 runpilot2-wrapper.sh
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc       100 May 28 21:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 21:21:47] -rwxr-xr-x. 1 boinc boinc      7986 May 28 21:16 run_atlas
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc       105 May 28 21:16 job.xml
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc      6602 May 28 21:16 init_data.xml
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc 223753147 May 28 21:16 EVNT.44871834._003607.pool.root.1
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc     15093 May 28 21:16 start_atlas.sh
[2025-05-28 21:21:47] drwxrwx--x. 2 boinc boinc      4096 May 28 21:16 shared
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc    508877 May 28 21:16 input.tar.gz
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc         0 May 28 21:16 boinc_lockfile
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc      2559 May 28 21:16 pandaJob.out
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc    993415 May 28 21:16 agis_schedconf.cvmfs.json
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc   1603667 May 28 21:16 agis_ddmendpoints.agis.ALL.json
[2025-05-28 21:21:47] drwx------. 4 boinc boinc      4096 May 28 21:16 pilot3
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc       523 May 28 21:18 boinc_task_state.xml
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc       963 May 28 21:19 memory_monitor_summary.json
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc     21295 May 28 21:19 log.44871837._092783.job.log.tgz.1
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc        95 May 28 21:20 pilot_heartbeat.json
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc      8315 May 28 21:21 heartbeat.json
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc      8192 May 28 21:21 boinc_mmap_file
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc        22 May 28 21:21 wrapper_checkpoint.txt
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc      4475 May 28 21:21 pilotlog.txt
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc     81167 May 28 21:21 log.44871837._092783.job.log.1
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc       188 May 28 21:21 output.list
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc       620 May 28 21:21 runtime_log
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc    122880 May 28 21:21 result.tar.gz
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc      8484 May 28 21:21 runtime_log.err
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc       646 May 28 21:21 1nZLDmOoge7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6SdKDmZ9taRn.diag
[2025-05-28 21:21:47] -rw-r--r--. 1 boinc boinc     21769 May 28 21:21 stderr.txt
[2025-05-28 21:21:47] No HITS result produced
[2025-05-28 21:21:47]  *** Contents of shared directory: ***
[2025-05-28 21:21:47] total 219152
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc 223753147 May 28 21:16 ATLAS.root_0
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc     15093 May 28 21:16 start_atlas.sh
[2025-05-28 21:21:47] -rw-r--r--. 2 boinc boinc    508877 May 28 21:16 input.tar.gz
[2025-05-28 21:21:47] -rw-------. 1 boinc boinc    122880 May 28 21:21 result.tar.gz
21:21:48 (3360597): run_atlas exited; CPU time 28.356903
21:21:48 (3360597): called boinc_finish(0)

</stderr_txt>
]]>

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