Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:51:31 (28336): wrapper (7.7.26015): starting
23:51:31 (28336): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 23:51:31] Arguments: --nthreads 8
[2025-05-28 23:51:31] Threads: 8
[2025-05-28 23:51:31] Checking for CVMFS
[2025-05-28 23:51:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 23:51:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 23:51:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 23:51:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 23:51:32] 2.11.2.0 2901 26525 89672 146542 3 56 14255572 20275201 1 130560 0 8892409 99.844 5862533 7088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-28 23:51:32] CVMFS is ok
[2025-05-28 23:51:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 23:51:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 23:51:32] Further information can be found at the LHC@home message board.
[2025-05-28 23:51:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 23:51:32] Checking for apptainer binary...
[2025-05-28 23:51:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 23:51:32] Running /usr/bin/apptainer --version
[2025-05-28 23:51:32] apptainer version 1.3.2-1.el7
[2025-05-28 23:51:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 23:51:34] c-204-20.aglt2.org
[2025-05-28 23:51:34] apptainer works
[2025-05-28 23:51:34] Set ATHENA_PROC_NUMBER=8
[2025-05-28 23:51:34] Set ATHENA_CORE_NUMBER=8
[2025-05-28 23:51:34] Starting ATLAS job with PandaID=6668864003
[2025-05-28 23:51:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 02:40:37]  *** The last 200 lines of the pilot log: ***
[2025-05-29 02:40:37] 2025-05-29 06:40:12,837 | INFO     | 10106s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-29 02:40:37] 2025-05-29 06:40:14,924 | INFO     | monitor loop #745: job 0:6668864003 is in state 'finished'
[2025-05-29 02:40:37] 2025-05-29 06:40:14,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 02:40:37] 2025-05-29 06:40:15,959 | INFO     | PID=31992 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-29 02:40:37] 2025-05-29 06:40:17,435 | INFO     | monitor loop #746: job 0:6668864003 is in state 'finished'
[2025-05-29 02:40:37] 2025-05-29 06:40:17,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,173 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-29 02:40:37] 2025-05-29 06:40:18,174 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668864003/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,175 | INFO     | extracted standard info from prmon json
[2025-05-29 02:40:37] 2025-05-29 06:40:18,175 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 02:40:37] 2025-05-29 06:40:18,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 02:40:37] 2025-05-29 06:40:18,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 02:40:37] 2025-05-29 06:40:18,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 02:40:37] 2025-05-29 06:40:18,181 | INFO     | fitting pss+swap vs Time
[2025-05-29 02:40:37] 2025-05-29 06:40:18,181 | INFO     | sum of square deviations: 1392881930.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,182 | INFO     | sum of deviations: 20650543622.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,183 | INFO     | mean x: 1748495745.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,183 | INFO     | mean y: 2494520.1333333333
[2025-05-29 02:40:37] 2025-05-29 06:40:18,183 | INFO     | -- intersect: -25920296835.917847
[2025-05-29 02:40:37] 2025-05-29 06:40:18,183 | INFO     | intersect: -25920296835.917847
[2025-05-29 02:40:37] 2025-05-29 06:40:18,183 | INFO     | chi2: 1.7331256867887972
[2025-05-29 02:40:37] 2025-05-29 06:40:18,184 | INFO     | sum of square deviations: 1270051720.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | sum of deviations: 20048106402.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | mean x: 1748495592.5
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | mean y: 2493771.95
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | -- intersect: -27597977240.260456
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | intersect: -27597977240.260456
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | chi2: 1.7350418594758186
[2025-05-29 02:40:37] 2025-05-29 06:40:18,185 | INFO     | current chi2=1.7350418594758186 (change=-0.11056166910616491 %)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,186 | INFO     | right removable region: 159
[2025-05-29 02:40:37] 2025-05-29 06:40:18,186 | INFO     | sum of square deviations: 1270051720.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,187 | INFO     | sum of deviations: -8164794795.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,187 | INFO     | mean x: 1748495897.5
[2025-05-29 02:40:37] 2025-05-29 06:40:18,187 | INFO     | mean y: 2529892.4375
[2025-05-29 02:40:37] 2025-05-29 06:40:18,187 | INFO     | -- intersect: 11243103782.599117
[2025-05-29 02:40:37] 2025-05-29 06:40:18,187 | INFO     | intersect: 11243103782.599117
[2025-05-29 02:40:37] 2025-05-29 06:40:18,188 | INFO     | chi2: 0.09401483334082596
[2025-05-29 02:40:37] 2025-05-29 06:40:18,188 | INFO     | current chi2=0.09401483334082596 (change=94.57541746351816 %)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,188 | INFO     | sum of square deviations: 1154663510.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,189 | INFO     | sum of deviations: -10831634458.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,189 | INFO     | mean x: 1748496050.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,189 | INFO     | mean y: 2533416.412903226
[2025-05-29 02:40:37] 2025-05-29 06:40:18,189 | INFO     | -- intersect: 16404775195.800987
[2025-05-29 02:40:37] 2025-05-29 06:40:18,189 | INFO     | intersect: 16404775195.800987
[2025-05-29 02:40:37] 2025-05-29 06:40:18,190 | INFO     | chi2: 0.07631405237257817
[2025-05-29 02:40:37] 2025-05-29 06:40:18,190 | INFO     | current chi2=0.07631405237257817 (change=18.827647020420997 %)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,190 | INFO     | left removable region: 20
[2025-05-29 02:40:37] 2025-05-29 06:40:18,190 | INFO     | sum of square deviations: 832722590.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,191 | INFO     | sum of deviations: -1003480134.0000004
[2025-05-29 02:40:37] 2025-05-29 06:40:18,191 | INFO     | mean x: 1748496172.0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,191 | INFO     | mean y: 2519066.618705036
[2025-05-29 02:40:37] 2025-05-29 06:40:18,191 | INFO     | -- intersect: 2109560708.1539104
[2025-05-29 02:40:37] 2025-05-29 06:40:18,191 | INFO     | intersect: 2109560708.1539104
[2025-05-29 02:40:37] 2025-05-29 06:40:18,192 | INFO     | chi2: 0.020913635922850844
[2025-05-29 02:40:37] 2025-05-29 06:40:18,192 | INFO     | -- intersect: 2109560708.1539104
[2025-05-29 02:40:37] 2025-05-29 06:40:18,192 | INFO     | current memory leak: -1.21 B/s (using 139 data points, chi2=0.02)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,192 | INFO     | ..............................
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . Timing measurements:
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . get job = 0 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . initial setup = 2 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . payload setup = 11 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . stage-in = 0 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . payload execution = 10064 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . stage-out = 0 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | . log creation = 0 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,193 | INFO     | ..............................
[2025-05-29 02:40:37] 2025-05-29 06:40:18,713 | INFO     | 
[2025-05-29 02:40:37] 2025-05-29 06:40:18,714 | INFO     | job summary report
[2025-05-29 02:40:37] 2025-05-29 06:40:18,714 | INFO     | --------------------------------------------------
[2025-05-29 02:40:37] 2025-05-29 06:40:18,714 | INFO     | PanDA job id: 6668864003
[2025-05-29 02:40:37] 2025-05-29 06:40:18,714 | INFO     | task id: 44871837
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | errors: (none)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | pilot state: finished 
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | transexitcode: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | exeerrorcode: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,715 | INFO     | exeerrordiag: 
[2025-05-29 02:40:37] 2025-05-29 06:40:18,716 | INFO     | exitcode: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,716 | INFO     | exitmsg: OK
[2025-05-29 02:40:37] 2025-05-29 06:40:18,716 | INFO     | cpuconsumptiontime: 73604 s
[2025-05-29 02:40:37] 2025-05-29 06:40:18,716 | INFO     | nevents: 400
[2025-05-29 02:40:37] 2025-05-29 06:40:18,716 | INFO     | neventsw: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | pid: 7188
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | pgrp: 7188
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | corecount: 8
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | event service: False
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | sizes: {0: 2405234, 6: 2405440, 11: 2405468, 10078: 2433897, 10079: 2433896, 10080: 2442893, 10084: 2443077, 10091: 2443247}
[2025-05-29 02:40:37] 2025-05-29 06:40:18,717 | INFO     | --------------------------------------------------
[2025-05-29 02:40:37] 2025-05-29 06:40:18,718 | INFO     | 
[2025-05-29 02:40:37] 2025-05-29 06:40:18,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-29 02:40:37] 2025-05-29 06:40:18,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 02:40:37] 2025-05-29 06:40:18,751 | INFO     | job 6668864003 has completed (purged errors)
[2025-05-29 02:40:37] 2025-05-29 06:40:18,751 | INFO     | overall cleanup function is called
[2025-05-29 02:40:37] 2025-05-29 06:40:19,757 | INFO     | --- collectZombieJob: --- 10, [7188]
[2025-05-29 02:40:37] 2025-05-29 06:40:19,758 | INFO     | zombie collector waiting for pid 7188
[2025-05-29 02:40:37] 2025-05-29 06:40:19,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 02:40:37] 2025-05-29 06:40:19,758 | INFO     | collected zombie processes
[2025-05-29 02:40:37] 2025-05-29 06:40:19,758 | INFO     | will attempt to kill all subprocesses of pid=7188
[2025-05-29 02:40:37] 2025-05-29 06:40:19,846 | INFO     | process IDs to be killed: [7188] (in reverse order)
[2025-05-29 02:40:37] 2025-05-29 06:40:19,905 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 02:40:37] 2025-05-29 06:40:19,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 02:40:37] 2025-05-29 06:40:19,910 | INFO     | did not find any defunct processes belonging to 7188
[2025-05-29 02:40:37] 2025-05-29 06:40:19,913 | INFO     | did not find any defunct processes belonging to 7188
[2025-05-29 02:40:37] 2025-05-29 06:40:19,914 | INFO     | ready for new job
[2025-05-29 02:40:37] 2025-05-29 06:40:19,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 02:40:37] 2025-05-29 06:40:19,916 | INFO     | **************************************
[2025-05-29 02:40:37] 2025-05-29 06:40:19,916 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 02:40:37] 2025-05-29 06:40:19,916 | INFO     | **************************************
[2025-05-29 02:40:37] 2025-05-29 06:40:19,917 | INFO     | 
[2025-05-29 02:40:37] 2025-05-29 06:40:19,917 | INFO     | architecture information:
[2025-05-29 02:40:37] 2025-05-29 06:40:19,918 | INFO     | executing command: cat /etc/os-release
[2025-05-29 02:40:37] 2025-05-29 06:40:19,938 | INFO     | cat /etc/os-release:
[2025-05-29 02:40:37] NAME="CentOS Linux"
[2025-05-29 02:40:37] VERSION="7 (Core)"
[2025-05-29 02:40:37] ID="centos"
[2025-05-29 02:40:37] ID_LIKE="rhel fedora"
[2025-05-29 02:40:37] VERSION_ID="7"
[2025-05-29 02:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 02:40:37] ANSI_COLOR="0;31"
[2025-05-29 02:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 02:40:37] HOME_URL="https://www.centos.org/"
[2025-05-29 02:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 02:40:37] 
[2025-05-29 02:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 02:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 02:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 02:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 02:40:37] 
[2025-05-29 02:40:37] 2025-05-29 06:40:19,946 | INFO     | **************************************
[2025-05-29 02:40:37] 2025-05-29 06:40:20,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-29 02:40:37] 2025-05-29 06:40:20,469 | INFO     | sufficient remaining disk space (18714984448 B)
[2025-05-29 02:40:37] 2025-05-29 06:40:20,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 02:40:37] 2025-05-29 06:40:20,470 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 02:40:37] 2025-05-29 06:40:20,470 | INFO     | update_server=False
[2025-05-29 02:40:37] 2025-05-29 06:40:20,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 02:40:37] 2025-05-29 06:40:20,471 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 02:40:37] 2025-05-29 06:40:20,472 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 02:40:37] 2025-05-29 06:40:20,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 02:40:37] 2025-05-29 06:40:20,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 02:40:37] 2025-05-29 06:40:20,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 02:40:37] 2025-05-29 06:40:20,640 | INFO     | all payload control threads have been joined
[2025-05-29 02:40:37] 2025-05-29 06:40:20,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 02:40:37] 2025-05-29 06:40:20,945 | INFO     | aborting loop
[2025-05-29 02:40:37] 2025-05-29 06:40:21,002 | INFO     | all data control threads have been joined
[2025-05-29 02:40:37] 2025-05-29 06:40:21,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 02:40:37] 2025-05-29 06:40:21,477 | INFO     | [job] retrieve thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:21,646 | INFO     | [payload] control thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:21,660 | INFO     | all job control threads have been joined
[2025-05-29 02:40:37] 2025-05-29 06:40:21,691 | INFO     | [data] copytool_in thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:21,788 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:21,950 | INFO     | [job] job monitor thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,010 | INFO     | [data] control thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,230 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,475 | INFO     | [data] copytool_out thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,501 | INFO     | [payload] validate_post thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,666 | INFO     | [job] control thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,705 | INFO     | [job] validate thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,906 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:22,988 | INFO     | [payload] failed_post thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:23,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 02:40:37] 2025-05-29 06:40:24,306 | INFO     | [job] queue monitor thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:25,167 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:30,535 | INFO     | job.realtimelogging is not enabled
[2025-05-29 02:40:37] 2025-05-29 06:40:31,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 02:40:37] 2025-05-29 06:40:32,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670670513984)>', '<ExcThread(monitor, started 139670071514880)>']
[2025-05-29 02:40:37] 2025-05-29 06:40:32,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 02:40:37] 2025-05-29 06:40:32,527 | INFO     | [monitor] control thread has ended
[2025-05-29 02:40:37] 2025-05-29 06:40:37,356 | INFO     | all workflow threads have been joined
[2025-05-29 02:40:37] 2025-05-29 06:40:37,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 02:40:37] 2025-05-29 06:40:37,357 | INFO     | traces error code: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:37,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 02:40:37] 2025-05-29 06:40:37,482 [wrapper] ==== pilot stdout END ====
[2025-05-29 02:40:37] 2025-05-29 06:40:37,488 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 02:40:37] 2025-05-29 06:40:37,493 [wrapper] pilotpid: 31992
[2025-05-29 02:40:37] 2025-05-29 06:40:37,498 [wrapper] Pilot exit status: 0
[2025-05-29 02:40:37] 2025-05-29 06:40:37,517 [wrapper] pandaids: 6668864003
[2025-05-29 02:40:37] 2025-05-29 06:40:37,564 [wrapper] cleanup supervisor_pilot 24188 31993
[2025-05-29 02:40:37] 2025-05-29 06:40:37,570 [wrapper] Test setup, not cleaning
[2025-05-29 02:40:37] 2025-05-29 06:40:37,575 [wrapper] apfmon messages muted
[2025-05-29 02:40:37] 2025-05-29 06:40:37,580 [wrapper] ==== wrapper stdout END ====
[2025-05-29 02:40:37] 2025-05-29 06:40:37,585 [wrapper] ==== wrapper stderr END ====
[2025-05-29 02:40:37]  *** Error codes and diagnostics ***
[2025-05-29 02:40:37]     "exeErrorCode": 0,
[2025-05-29 02:40:37]     "exeErrorDiag": "",
[2025-05-29 02:40:37]     "pilotErrorCode": 0,
[2025-05-29 02:40:37]     "pilotErrorDiag": "",
[2025-05-29 02:40:37]  *** Listing of results directory ***
[2025-05-29 02:40:37] total 415748
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas      5111 May 28 16:46 queuedata.json
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas    495897 May 28 16:46 pilot3.tar.gz
[2025-05-29 02:40:37] -rwx------ 1 boincer umatlas     37140 May 28 16:46 runpilot2-wrapper.sh
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas       100 May 28 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 02:40:37] -rwxr-xr-x 1 boincer umatlas      7986 May 28 23:51 run_atlas
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas       105 May 28 23:51 job.xml
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas 223069858 May 28 23:51 EVNT.44871834._003512.pool.root.1
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas      5816 May 28 23:51 init_data.xml
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas     15093 May 28 23:51 start_atlas.sh
[2025-05-29 02:40:37] drwxrwx--x 2 boincer umatlas      4096 May 28 23:51 shared
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas    508878 May 28 23:51 input.tar.gz
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas         0 May 28 23:51 boinc_lockfile
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas      2559 May 28 23:51 pandaJob.out
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas    993415 May 28 23:51 agis_schedconf.cvmfs.json
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas   1603667 May 28 23:51 agis_ddmendpoints.agis.ALL.json
[2025-05-29 02:40:37] drwx------ 4 boincer umatlas      4096 May 28 23:51 pilot3
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas 196249189 May 29 02:39 HITS.44871837._090252.pool.root.1
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas       530 May 29 02:40 boinc_task_state.xml
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas      1050 May 29 02:40 memory_monitor_summary.json
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas    352823 May 29 02:40 log.44871837._090252.job.log.tgz.1
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas        95 May 29 02:40 pilot_heartbeat.json
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas      7742 May 29 02:40 heartbeat.json
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas      8192 May 29 02:40 boinc_mmap_file
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas        28 May 29 02:40 wrapper_checkpoint.txt
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas      4548 May 29 02:40 pilotlog.txt
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas    930138 May 29 02:40 log.44871837._090252.job.log.1
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas       357 May 29 02:40 output.list
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas       620 May 29 02:40 runtime_log
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas   1300480 May 29 02:40 result.tar.gz
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas      8660 May 29 02:40 runtime_log.err
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas       662 May 29 02:40 LVjNDmJqce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmv6TKDmEIk2Wo.diag
[2025-05-29 02:40:37] -rw-r--r-- 1 boincer umatlas     21143 May 29 02:40 stderr.txt
[2025-05-29 02:40:37] HITS file was successfully produced:
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas 196249189 May 29 02:39 shared/HITS.pool.root.1
[2025-05-29 02:40:37]  *** Contents of shared directory: ***
[2025-05-29 02:40:37] total 411284
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas 223069858 May 28 23:51 ATLAS.root_0
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas     15093 May 28 23:51 start_atlas.sh
[2025-05-29 02:40:37] -rw-r--r-- 2 boincer umatlas    508878 May 28 23:51 input.tar.gz
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas 196249189 May 29 02:39 HITS.pool.root.1
[2025-05-29 02:40:37] -rw------- 1 boincer umatlas   1300480 May 29 02:40 result.tar.gz
02:40:39 (28336): run_atlas exited; CPU time 73534.295754
02:40:39 (28336): called boinc_finish(0)

</stderr_txt>
]]>

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