Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:21 (6431): wrapper (7.7.26015): starting
16:41:21 (6431): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 16:41:21] Arguments: --nthreads 8
[2025-05-29 16:41:21] Threads: 8
[2025-05-29 16:41:21] Checking for CVMFS
[2025-05-29 16:41:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 16:41:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 16:41:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 16:41:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 16:41:23] 2.11.2.0 1855 24708 96068 146565 1 59 22268984 25165825 4635 130560 0 13868086 99.814 14629681 1826 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 16:41:23] CVMFS is ok
[2025-05-29 16:41:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 16:41:23] Checking for apptainer binary...
[2025-05-29 16:41:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 16:41:23] Running /usr/bin/apptainer --version
[2025-05-29 16:41:24] apptainer version 1.3.2-1.el7
[2025-05-29 16:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 16:41:39] cg-vwn348.simple-grid.lan
[2025-05-29 16:41:39] apptainer works
[2025-05-29 16:41:39] Set ATHENA_PROC_NUMBER=8
[2025-05-29 16:41:39] Set ATHENA_CORE_NUMBER=8
[2025-05-29 16:41:39] Starting ATLAS job with PandaID=6668864114
[2025-05-29 16:41:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 22:18:57]  *** The last 200 lines of the pilot log: ***
[2025-05-29 22:18:57] 2025-05-29 20:08:58,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 22:18:57] 2025-05-29 20:08:58,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 22:18:57] 2025-05-29 20:08:58,115 | INFO     | fitting pss+swap vs Time
[2025-05-29 22:18:57] 2025-05-29 20:08:58,116 | INFO     | sum of square deviations: 9237596457.5
[2025-05-29 22:18:57] 2025-05-29 20:08:58,119 | INFO     | sum of deviations: 131096067612.50006
[2025-05-29 22:18:57] 2025-05-29 20:08:58,119 | INFO     | mean x: 1748539809.5
[2025-05-29 22:18:57] 2025-05-29 20:08:58,119 | INFO     | mean y: 2452156.564516129
[2025-05-29 22:18:57] 2025-05-29 20:08:58,119 | INFO     | -- intersect: -24812086359.377144
[2025-05-29 22:18:57] 2025-05-29 20:08:58,119 | INFO     | intersect: -24812086359.377144
[2025-05-29 22:18:57] 2025-05-29 20:08:58,120 | INFO     | chi2: 6.455241150600123
[2025-05-29 22:18:57] 2025-05-29 20:08:58,121 | INFO     | sum of square deviations: 8797783560.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,123 | INFO     | sum of deviations: 149080565212.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,124 | INFO     | mean x: 1748539657.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,124 | INFO     | mean y: 2458299.6819672133
[2025-05-29 22:18:57] 2025-05-29 20:08:58,124 | INFO     | -- intersect: -29626968087.47464
[2025-05-29 22:18:57] 2025-05-29 20:08:58,124 | INFO     | intersect: -29626968087.47464
[2025-05-29 22:18:57] 2025-05-29 20:08:58,125 | INFO     | chi2: 5.7239898320934115
[2025-05-29 22:18:57] 2025-05-29 20:08:58,125 | INFO     | current chi2=5.7239898320934115 (change=11.328024801036737 %)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,125 | INFO     | right removable region: 304
[2025-05-29 22:18:57] 2025-05-29 20:08:58,125 | INFO     | sum of square deviations: 8797783560.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,128 | INFO     | sum of deviations: 21480038701.99998
[2025-05-29 22:18:57] 2025-05-29 20:08:58,134 | INFO     | mean x: 1748539962.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,134 | INFO     | mean y: 2490143.9114754098
[2025-05-29 22:18:57] 2025-05-29 20:08:58,134 | INFO     | -- intersect: -4266619888.1331844
[2025-05-29 22:18:57] 2025-05-29 20:08:58,134 | INFO     | intersect: -4266619888.1331844
[2025-05-29 22:18:57] 2025-05-29 20:08:58,135 | INFO     | chi2: 1.651638937593704
[2025-05-29 22:18:57] 2025-05-29 20:08:58,135 | INFO     | current chi2=1.651638937593704 (change=74.41398548774345 %)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,136 | INFO     | sum of square deviations: 8372156975.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,138 | INFO     | sum of deviations: -16930667546.999996
[2025-05-29 22:18:57] 2025-05-29 20:08:58,139 | INFO     | mean x: 1748540114.5
[2025-05-29 22:18:57] 2025-05-29 20:08:58,139 | INFO     | mean y: 2503828.6466666665
[2025-05-29 22:18:57] 2025-05-29 20:08:58,139 | INFO     | -- intersect: 3538504343.160766
[2025-05-29 22:18:57] 2025-05-29 20:08:58,139 | INFO     | intersect: 3538504343.160766
[2025-05-29 22:18:57] 2025-05-29 20:08:58,139 | INFO     | chi2: 0.8646033862037632
[2025-05-29 22:18:57] 2025-05-29 20:08:58,140 | INFO     | current chi2=0.8646033862037632 (change=47.65179201554693 %)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,140 | INFO     | sum of square deviations: 7960484140.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,143 | INFO     | sum of deviations: -15839980959.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,143 | INFO     | mean x: 1748540267.0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,143 | INFO     | mean y: 2503405.474576271
[2025-05-29 22:18:57] 2025-05-29 20:08:58,143 | INFO     | -- intersect: 3481794871.699993
[2025-05-29 22:18:57] 2025-05-29 20:08:58,143 | INFO     | intersect: 3481794871.699993
[2025-05-29 22:18:57] 2025-05-29 20:08:58,144 | INFO     | chi2: 0.8498761804704497
[2025-05-29 22:18:57] 2025-05-29 20:08:58,144 | INFO     | current chi2=0.8498761804704497 (change=1.703348144167775 %)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,144 | INFO     | left removable region: 30
[2025-05-29 22:18:57] 2025-05-29 20:08:58,145 | INFO     | sum of square deviations: 6378584712.5
[2025-05-29 22:18:57] 2025-05-29 20:08:58,147 | INFO     | sum of deviations: 13278472161.499998
[2025-05-29 22:18:57] 2025-05-29 20:08:58,147 | INFO     | mean x: 1748540541.5
[2025-05-29 22:18:57] 2025-05-29 20:08:58,147 | INFO     | mean y: 2506890.52919708
[2025-05-29 22:18:57] 2025-05-29 20:08:58,147 | INFO     | -- intersect: -3637477204.698398
[2025-05-29 22:18:57] 2025-05-29 20:08:58,148 | INFO     | intersect: -3637477204.698398
[2025-05-29 22:18:57] 2025-05-29 20:08:58,148 | INFO     | chi2: 0.00201050751764807
[2025-05-29 22:18:57] 2025-05-29 20:08:58,148 | INFO     | -- intersect: -3637477204.698398
[2025-05-29 22:18:57] 2025-05-29 20:08:58,148 | INFO     | current memory leak: 2.08 B/s (using 274 data points, chi2=0.00)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,149 | INFO     | ..............................
[2025-05-29 22:18:57] 2025-05-29 20:08:58,149 | INFO     | . Timing measurements:
[2025-05-29 22:18:57] 2025-05-29 20:08:58,149 | INFO     | . get job = 0 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,149 | INFO     | . initial setup = 6 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | . payload setup = 154 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | . stage-in = 0 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | . payload execution = 19014 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | . stage-out = 4 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | . log creation = 1 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,150 | INFO     | ..............................
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | 
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | job summary report
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | --------------------------------------------------
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | PanDA job id: 6668864114
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | task id: 44871837
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | errors: (none)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 22:18:57] 2025-05-29 20:08:58,702 | INFO     | pilot state: finished 
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | transexitcode: 0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | exeerrorcode: 0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | exeerrordiag: 
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | exitcode: 0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | exitmsg: OK
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | cpuconsumptiontime: 72192 s
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | nevents: 400
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | neventsw: 0
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | pid: 21895
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | pgrp: 21895
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | corecount: 8
[2025-05-29 22:18:57] 2025-05-29 20:08:58,703 | INFO     | event service: False
[2025-05-29 22:18:57] 2025-05-29 20:08:58,704 | INFO     | sizes: {0: 2405008, 1: 2405263, 12: 2405263, 23: 2405291, 34: 2405319, 44: 2405347, 55: 2405503, 66: 2405531, 77: 2405559, 87: 2405615, 95: 2405849, 98: 2406157, 1
[2025-05-29 22:18:57] 2025-05-29 20:08:58,704 | INFO     | --------------------------------------------------
[2025-05-29 22:18:57] 2025-05-29 20:08:58,704 | INFO     | 
[2025-05-29 22:18:57] 2025-05-29 20:08:58,704 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-29 22:18:57] 2025-05-29 20:08:58,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 22:18:57] 2025-05-29 20:08:58,913 | INFO     | job 6668864114 has completed (purged errors)
[2025-05-29 22:18:57] 2025-05-29 20:08:58,913 | INFO     | overall cleanup function is called
[2025-05-29 22:18:57] 2025-05-29 20:08:59,922 | INFO     | --- collectZombieJob: --- 10, [21895]
[2025-05-29 22:18:57] 2025-05-29 20:08:59,922 | INFO     | zombie collector waiting for pid 21895
[2025-05-29 22:18:57] 2025-05-29 20:08:59,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 22:18:57] 2025-05-29 20:08:59,922 | INFO     | collected zombie processes
[2025-05-29 22:18:57] 2025-05-29 20:08:59,922 | INFO     | will attempt to kill all subprocesses of pid=21895
[2025-05-29 22:18:57] 2025-05-29 20:09:00,065 | INFO     | process IDs to be killed: [21895] (in reverse order)
[2025-05-29 22:18:57] 2025-05-29 20:09:00,227 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 22:18:57] 2025-05-29 20:09:00,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 22:18:57] 2025-05-29 20:09:00,231 | INFO     | did not find any defunct processes belonging to 21895
[2025-05-29 22:18:57] 2025-05-29 20:09:00,234 | INFO     | did not find any defunct processes belonging to 21895
[2025-05-29 22:18:57] 2025-05-29 20:09:00,235 | INFO     | ready for new job
[2025-05-29 22:18:57] 2025-05-29 20:09:00,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 22:18:57] 2025-05-29 20:09:00,237 | INFO     | **************************************
[2025-05-29 22:18:57] 2025-05-29 20:09:00,237 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 22:18:57] 2025-05-29 20:09:00,237 | INFO     | **************************************
[2025-05-29 22:18:57] 2025-05-29 20:09:00,237 | INFO     | 
[2025-05-29 22:18:57] 2025-05-29 20:09:00,238 | INFO     | pilot is running in a VM
[2025-05-29 22:18:57] 2025-05-29 20:09:00,238 | INFO     | architecture information:
[2025-05-29 22:18:57] 2025-05-29 20:09:00,239 | INFO     | executing command: cat /etc/os-release
[2025-05-29 22:18:57] 2025-05-29 20:09:00,396 | INFO     | cat /etc/os-release:
[2025-05-29 22:18:57] NAME="CentOS Linux"
[2025-05-29 22:18:57] VERSION="7 (Core)"
[2025-05-29 22:18:57] ID="centos"
[2025-05-29 22:18:57] ID_LIKE="rhel fedora"
[2025-05-29 22:18:57] VERSION_ID="7"
[2025-05-29 22:18:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 22:18:57] ANSI_COLOR="0;31"
[2025-05-29 22:18:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 22:18:57] HOME_URL="https://www.centos.org/"
[2025-05-29 22:18:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 22:18:57] 
[2025-05-29 22:18:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 22:18:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 22:18:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 22:18:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 22:18:57] 
[2025-05-29 22:18:57] 2025-05-29 20:09:00,397 | INFO     | **************************************
[2025-05-29 22:18:57] 2025-05-29 20:09:00,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-29 22:18:57] 2025-05-29 20:09:01,139 | INFO     | sufficient remaining disk space (495398682624 B)
[2025-05-29 22:18:57] 2025-05-29 20:09:01,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 22:18:57] 2025-05-29 20:09:01,140 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 22:18:57] 2025-05-29 20:09:01,140 | INFO     | update_server=False
[2025-05-29 22:18:57] 2025-05-29 20:09:01,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 22:18:57] 2025-05-29 20:09:01,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 22:18:57] 2025-05-29 20:09:01,146 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 22:18:57] 2025-05-29 20:09:01,146 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 22:18:57] 2025-05-29 20:09:01,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 22:18:57] 2025-05-29 20:09:01,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 22:18:57] 2025-05-29 20:09:01,473 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 22:18:57] 2025-05-29 20:09:01,473 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 22:18:57] 2025-05-29 20:09:01,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 22:18:57] 2025-05-29 20:09:01,473 | INFO     | will abort loop
[2025-05-29 22:18:57] 2025-05-29 20:09:01,936 | INFO     | all data control threads have been joined
[2025-05-29 22:18:57] 2025-05-29 20:09:02,146 | INFO     | [job] retrieve thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:02,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 22:18:57] 2025-05-29 20:09:02,287 | INFO     | all payload control threads have been joined
[2025-05-29 22:18:57] 2025-05-29 20:09:02,323 | INFO     | [data] copytool_in thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:02,479 | INFO     | [job] job monitor thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:02,513 | INFO     | all job control threads have been joined
[2025-05-29 22:18:57] 2025-05-29 20:09:02,635 | INFO     | [payload] failed_post thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:02,730 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:02,942 | INFO     | [data] control thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,136 | INFO     | [payload] validate_post thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,148 | INFO     | [data] copytool_out thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,293 | INFO     | [payload] control thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,314 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 22:18:57] 2025-05-29 20:09:03,519 | INFO     | [job] control thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,546 | INFO     | [job] validate thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:03,580 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:04,320 | INFO     | [job] queue monitor thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:06,160 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:12,046 | INFO     | job.realtimelogging is not enabled
[2025-05-29 22:18:57] 2025-05-29 20:09:13,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 22:18:57] 2025-05-29 20:09:13,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997087364928)>', '<ExcThread(monitor, started 139996656817920)>']
[2025-05-29 22:18:57] 2025-05-29 20:09:14,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 22:18:57] 2025-05-29 20:09:14,219 | INFO     | [monitor] control thread has ended
[2025-05-29 22:18:57] 2025-05-29 20:09:18,512 | INFO     | all workflow threads have been joined
[2025-05-29 22:18:57] 2025-05-29 20:09:18,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 22:18:57] 2025-05-29 20:09:18,512 | INFO     | traces error code: 0
[2025-05-29 22:18:57] 2025-05-29 20:09:18,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 22:18:57] 2025-05-29 20:09:18,889 [wrapper] ==== pilot stdout END ====
[2025-05-29 22:18:57] 2025-05-29 20:09:19,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 22:18:57] 2025-05-29 20:09:19,111 [wrapper] pilotpid: 15302
[2025-05-29 22:18:57] 2025-05-29 20:09:19,226 [wrapper] Pilot exit status: 0
[2025-05-29 22:18:57] 2025-05-29 20:09:19,663 [wrapper] pandaids: 6668864114
[2025-05-29 22:18:57] 2025-05-29 20:09:20,603 [wrapper] cleanup supervisor_pilot 23264 15303
[2025-05-29 22:18:57] 2025-05-29 20:09:20,618 [wrapper] Test setup, not cleaning
[2025-05-29 22:18:57] 2025-05-29 20:09:20,624 [wrapper] apfmon messages muted
[2025-05-29 22:18:57] 2025-05-29 20:09:20,631 [wrapper] ==== wrapper stdout END ====
[2025-05-29 22:18:57] 2025-05-29 20:09:20,638 [wrapper] ==== wrapper stderr END ====
[2025-05-29 22:18:57]  *** Error codes and diagnostics ***
[2025-05-29 22:18:57]     "exeErrorCode": 0,
[2025-05-29 22:18:57]     "exeErrorDiag": "",
[2025-05-29 22:18:57]     "pilotErrorCode": 0,
[2025-05-29 22:18:57]     "pilotErrorDiag": "",
[2025-05-29 22:18:57]  *** Listing of results directory ***
[2025-05-29 22:18:57] total 418708
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc    495897 May 28 22:46 pilot3.tar.gz
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc      5111 May 28 22:48 queuedata.json
[2025-05-29 22:18:57] -rwx------. 1 boinc boinc     37140 May 28 22:49 runpilot2-wrapper.sh
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc       100 May 29 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 22:18:57] -rwxr-xr-x. 1 boinc boinc      7986 May 29 16:41 run_atlas
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc       105 May 29 16:41 job.xml
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc      6372 May 29 16:41 init_data.xml
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc 224613970 May 29 16:41 EVNT.44871834._003516.pool.root.1
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc     15093 May 29 16:41 start_atlas.sh
[2025-05-29 22:18:57] drwxrwx--x. 2 boinc boinc        68 May 29 16:41 shared
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc    508873 May 29 16:41 input.tar.gz
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc         0 May 29 16:41 boinc_lockfile
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc      2559 May 29 16:41 pandaJob.out
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc    992776 May 29 16:44 agis_schedconf.cvmfs.json
[2025-05-29 22:18:57] drwx------. 4 boinc boinc      4096 May 29 16:44 pilot3
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc 196149940 May 29 22:06 HITS.44871837._090363.pool.root.1
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc       531 May 29 22:06 boinc_task_state.xml
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc      1017 May 29 22:07 memory_monitor_summary.json
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc   1603667 May 29 22:07 agis_ddmendpoints.agis.ALL.json
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc    439609 May 29 22:07 log.44871837._090363.job.log.tgz.1
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc        95 May 29 22:08 pilot_heartbeat.json
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc      7689 May 29 22:08 heartbeat.json
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc      4798 May 29 22:09 pilotlog.txt
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc   1640984 May 29 22:09 log.44871837._090363.job.log.1
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc       357 May 29 22:09 output.list
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc       620 May 29 22:09 runtime_log
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc   2099200 May 29 22:09 result.tar.gz
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc      8673 May 29 22:09 runtime_log.err
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc       657 May 29 22:09 NWhKDm8sce7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme5cKDmgM6Brn.diag
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc      8192 May 29 22:18 boinc_mmap_file
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc        28 May 29 22:18 wrapper_checkpoint.txt
[2025-05-29 22:18:57] -rw-r--r--. 1 boinc boinc     20532 May 29 22:18 stderr.txt
[2025-05-29 22:18:57] HITS file was successfully produced:
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc 196149940 May 29 22:06 shared/HITS.pool.root.1
[2025-05-29 22:18:57]  *** Contents of shared directory: ***
[2025-05-29 22:18:57] total 413476
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc 224613970 May 29 16:41 ATLAS.root_0
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc     15093 May 29 16:41 start_atlas.sh
[2025-05-29 22:18:57] -rw-r--r--. 2 boinc boinc    508873 May 29 16:41 input.tar.gz
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc 196149940 May 29 22:06 HITS.pool.root.1
[2025-05-29 22:18:57] -rw-------. 1 boinc boinc   2099200 May 29 22:09 result.tar.gz
22:18:59 (6431): run_atlas exited; CPU time 72460.988315
22:18:59 (6431): called boinc_finish(0)

</stderr_txt>
]]>

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