Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:30:29 (872306): wrapper (7.7.26015): starting
11:30:29 (872306): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 11:30:29] Arguments: --nthreads 12
[2025-05-30 11:30:29] Threads: 12
[2025-05-30 11:30:29] Checking for CVMFS
[2025-05-30 11:30:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 11:30:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 11:30:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 11:30:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 11:30:35] 2.12.7.0 110200 8866 45772 146596 0 187 3794708 4096001 1824 130560 0 13531125 99.994 2178220 1032 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-30 11:30:35] CVMFS is ok
[2025-05-30 11:30:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 11:30:35] Checking for apptainer binary...
[2025-05-30 11:30:35] apptainer is not installed, using version from CVMFS
[2025-05-30 11:30:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 11:30:38] ryzen4700s
[2025-05-30 11:30:38] apptainer works
[2025-05-30 11:30:38] Set ATHENA_PROC_NUMBER=12
[2025-05-30 11:30:38] Set ATHENA_CORE_NUMBER=12
[2025-05-30 11:30:38] Starting ATLAS job with PandaID=6668863897
[2025-05-30 11:30:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 14:05:39]  *** The last 200 lines of the pilot log: ***
[2025-05-30 14:05:39] 2025-05-30 14:05:20,151 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 14:05:39] 2025-05-30 14:05:20,151 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6668863897/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,152 | INFO     | extracted standard info from prmon json
[2025-05-30 14:05:39] 2025-05-30 14:05:20,152 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 14:05:39] 2025-05-30 14:05:20,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 14:05:39] 2025-05-30 14:05:20,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 14:05:39] 2025-05-30 14:05:20,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 14:05:39] 2025-05-30 14:05:20,166 | INFO     | fitting pss+swap vs Time
[2025-05-30 14:05:39] 2025-05-30 14:05:20,166 | INFO     | sum of square deviations: 964976232.5
[2025-05-30 14:05:39] 2025-05-30 14:05:20,167 | INFO     | sum of deviations: 8938162981.999996
[2025-05-30 14:05:39] 2025-05-30 14:05:20,167 | INFO     | mean x: 1748609394.5
[2025-05-30 14:05:39] 2025-05-30 14:05:20,167 | INFO     | mean y: 2634305.191780822
[2025-05-30 14:05:39] 2025-05-30 14:05:20,167 | INFO     | -- intersect: -16193988195.453413
[2025-05-30 14:05:39] 2025-05-30 14:05:20,168 | INFO     | intersect: -16193988195.453413
[2025-05-30 14:05:39] 2025-05-30 14:05:20,168 | INFO     | chi2: 5.743231154697411
[2025-05-30 14:05:39] 2025-05-30 14:05:20,168 | INFO     | sum of square deviations: 869188390.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,169 | INFO     | sum of deviations: 27832120835.999992
[2025-05-30 14:05:39] 2025-05-30 14:05:20,169 | INFO     | mean x: 1748609242.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,169 | INFO     | mean y: 2663685.8936170214
[2025-05-30 14:05:39] 2025-05-30 14:05:20,169 | INFO     | -- intersect: -55989229761.15341
[2025-05-30 14:05:39] 2025-05-30 14:05:20,169 | INFO     | intersect: -55989229761.15341
[2025-05-30 14:05:39] 2025-05-30 14:05:20,170 | INFO     | chi2: 4.2833816034147345
[2025-05-30 14:05:39] 2025-05-30 14:05:20,170 | INFO     | current chi2=4.2833816034147345 (change=25.418610394754175 %)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,170 | INFO     | sum of square deviations: 779958810.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,171 | INFO     | sum of deviations: 26958994926.5
[2025-05-30 14:05:39] 2025-05-30 14:05:20,175 | INFO     | mean x: 1748609089.5
[2025-05-30 14:05:39] 2025-05-30 14:05:20,175 | INFO     | mean y: 2662203.3161764704
[2025-05-30 14:05:39] 2025-05-30 14:05:20,175 | INFO     | -- intersect: -60437380229.51727
[2025-05-30 14:05:39] 2025-05-30 14:05:20,175 | INFO     | intersect: -60437380229.51727
[2025-05-30 14:05:39] 2025-05-30 14:05:20,176 | INFO     | chi2: 4.29468113844918
[2025-05-30 14:05:39] 2025-05-30 14:05:20,176 | INFO     | current chi2=4.29468113844918 (change=-0.26379940151578635 %)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,176 | INFO     | right removable region: 135
[2025-05-30 14:05:39] 2025-05-30 14:05:20,176 | INFO     | sum of square deviations: 869188390.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | sum of deviations: -38056379270.00001
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | mean x: 1748609547.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | mean y: 2708838.4680851065
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | -- intersect: 76563496903.95859
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | intersect: 76563496903.95859
[2025-05-30 14:05:39] 2025-05-30 14:05:20,177 | INFO     | chi2: 2.050821396621617
[2025-05-30 14:05:39] 2025-05-30 14:05:20,178 | INFO     | current chi2=2.050821396621617 (change=64.29150522795443 %)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,178 | INFO     | sum of square deviations: 779958810.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,178 | INFO     | sum of deviations: -45718398339.99999
[2025-05-30 14:05:39] 2025-05-30 14:05:20,179 | INFO     | mean x: 1748609699.5
[2025-05-30 14:05:39] 2025-05-30 14:05:20,187 | INFO     | mean y: 2721819.132352941
[2025-05-30 14:05:39] 2025-05-30 14:05:20,187 | INFO     | -- intersect: 102499973927.77728
[2025-05-30 14:05:39] 2025-05-30 14:05:20,187 | INFO     | intersect: 102499973927.77728
[2025-05-30 14:05:39] 2025-05-30 14:05:20,188 | INFO     | chi2: 1.8760579641233606
[2025-05-30 14:05:39] 2025-05-30 14:05:20,188 | INFO     | current chi2=1.8760579641233606 (change=8.521631029701059 %)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,188 | INFO     | left removable region: 20
[2025-05-30 14:05:39] 2025-05-30 14:05:20,188 | INFO     | sum of square deviations: 471562330.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,188 | INFO     | sum of deviations: -20572225416.999996
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | mean x: 1748609669.0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | mean y: 2748624.165217391
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | -- intersect: 76287027474.45793
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | intersect: 76287027474.45793
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | chi2: 0.18584817384764277
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | -- intersect: 76287027474.45793
[2025-05-30 14:05:39] 2025-05-30 14:05:20,189 | INFO     | current memory leak: -43.63 B/s (using 115 data points, chi2=0.19)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | ..............................
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . Timing measurements:
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . get job = 0 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . initial setup = 6 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . payload setup = 81 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . stage-in = 0 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . payload execution = 8931 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,190 | INFO     | . stage-out = 3 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,191 | INFO     | . log creation = 0 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,191 | INFO     | ..............................
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | 
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | job summary report
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | --------------------------------------------------
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | PanDA job id: 6668863897
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | task id: 44871837
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | errors: (none)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | pilot state: finished 
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | transexitcode: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | exeerrorcode: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,519 | INFO     | exeerrordiag: 
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | exitcode: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | exitmsg: OK
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | cpuconsumptiontime: 45355 s
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | nevents: 400
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | neventsw: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | pid: 882626
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | pgrp: 882626
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | corecount: 12
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | event service: False
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | sizes: {0: 2405030, 1: 2405285, 2: 2405313, 12: 2405313, 23: 2405341, 34: 2405369, 44: 2405525, 48: 2405759, 55: 2405787, 9015: 2433645, 9020: 2442632, 9021: 24429
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | --------------------------------------------------
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | 
[2025-05-30 14:05:39] 2025-05-30 14:05:20,520 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-30 14:05:39] 2025-05-30 14:05:20,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | job 6668863897 has completed (purged errors)
[2025-05-30 14:05:39] 2025-05-30 14:05:20,593 | INFO     | overall cleanup function is called
[2025-05-30 14:05:39] 2025-05-30 14:05:21,607 | INFO     | --- collectZombieJob: --- 10, [882626]
[2025-05-30 14:05:39] 2025-05-30 14:05:21,609 | INFO     | zombie collector waiting for pid 882626
[2025-05-30 14:05:39] 2025-05-30 14:05:21,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 14:05:39] 2025-05-30 14:05:21,609 | INFO     | collected zombie processes
[2025-05-30 14:05:39] 2025-05-30 14:05:21,609 | INFO     | will attempt to kill all subprocesses of pid=882626
[2025-05-30 14:05:39] 2025-05-30 14:05:21,916 | INFO     | process IDs to be killed: [882626] (in reverse order)
[2025-05-30 14:05:39] 2025-05-30 14:05:22,016 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 14:05:39] 2025-05-30 14:05:22,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 14:05:39] 2025-05-30 14:05:22,019 | INFO     | did not find any defunct processes belonging to 882626
[2025-05-30 14:05:39] 2025-05-30 14:05:22,023 | INFO     | did not find any defunct processes belonging to 882626
[2025-05-30 14:05:39] 2025-05-30 14:05:22,023 | INFO     | ready for new job
[2025-05-30 14:05:39] 2025-05-30 14:05:22,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 14:05:39] 2025-05-30 14:05:22,025 | INFO     | **************************************
[2025-05-30 14:05:39] 2025-05-30 14:05:22,025 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 14:05:39] 2025-05-30 14:05:22,025 | INFO     | **************************************
[2025-05-30 14:05:39] 2025-05-30 14:05:22,025 | INFO     | 
[2025-05-30 14:05:39] 2025-05-30 14:05:22,044 | INFO     | architecture information:
[2025-05-30 14:05:39] 2025-05-30 14:05:22,055 | INFO     | executing command: cat /etc/os-release
[2025-05-30 14:05:39] 2025-05-30 14:05:22,095 | INFO     | cat /etc/os-release:
[2025-05-30 14:05:39] NAME="CentOS Linux"
[2025-05-30 14:05:39] VERSION="7 (Core)"
[2025-05-30 14:05:39] ID="centos"
[2025-05-30 14:05:39] ID_LIKE="rhel fedora"
[2025-05-30 14:05:39] VERSION_ID="7"
[2025-05-30 14:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 14:05:39] ANSI_COLOR="0;31"
[2025-05-30 14:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 14:05:39] HOME_URL="https://www.centos.org/"
[2025-05-30 14:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 14:05:39] 
[2025-05-30 14:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 14:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 14:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 14:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 14:05:39] 
[2025-05-30 14:05:39] 2025-05-30 14:05:22,096 | INFO     | **************************************
[2025-05-30 14:05:39] 2025-05-30 14:05:22,599 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-30 14:05:39] 2025-05-30 14:05:22,651 | INFO     | sufficient remaining disk space (116577533952 B)
[2025-05-30 14:05:39] 2025-05-30 14:05:22,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 14:05:39] 2025-05-30 14:05:22,652 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 14:05:39] 2025-05-30 14:05:22,652 | INFO     | update_server=False
[2025-05-30 14:05:39] 2025-05-30 14:05:22,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 14:05:39] 2025-05-30 14:05:22,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 14:05:39] 2025-05-30 14:05:22,783 | INFO     | all payload control threads have been joined
[2025-05-30 14:05:39] 2025-05-30 14:05:22,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 14:05:39] 2025-05-30 14:05:22,787 | INFO     | aborting loop
[2025-05-30 14:05:39] 2025-05-30 14:05:22,842 | INFO     | all data control threads have been joined
[2025-05-30 14:05:39] 2025-05-30 14:05:22,991 | INFO     | all job control threads have been joined
[2025-05-30 14:05:39] 2025-05-30 14:05:23,367 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 14:05:39] 2025-05-30 14:05:23,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 14:05:39] 2025-05-30 14:05:23,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 14:05:39] 2025-05-30 14:05:23,655 | INFO     | [job] retrieve thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:23,791 | INFO     | [payload] control thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:23,795 | INFO     | [job] job monitor thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:23,847 | INFO     | [data] control thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:23,995 | INFO     | [job] control thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,031 | INFO     | [job] validate thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,031 | INFO     | [data] copytool_in thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,032 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,039 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,043 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,139 | INFO     | [payload] validate_post thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,687 | INFO     | [data] copytool_out thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:24,787 | INFO     | [payload] failed_post thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:25,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 14:05:39] 2025-05-30 14:05:25,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 14:05:39] 2025-05-30 14:05:26,387 | INFO     | [job] queue monitor thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:29,703 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 14:05:39] 2025-05-30 14:05:30,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585205143360)>', '<ExcThread(monitor, started 140584899548928)>']
[2025-05-30 14:05:39] 2025-05-30 14:05:31,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 14:05:39] 2025-05-30 14:05:31,415 | INFO     | [monitor] control thread has ended
[2025-05-30 14:05:39] 2025-05-30 14:05:35,572 | INFO     | all workflow threads have been joined
[2025-05-30 14:05:39] 2025-05-30 14:05:35,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 14:05:39] 2025-05-30 14:05:35,572 | INFO     | traces error code: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:35,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 14:05:39] 2025-05-30 14:05:36,456 [wrapper] ==== pilot stdout END ====
[2025-05-30 14:05:39] 2025-05-30 14:05:36,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 14:05:39] 2025-05-30 14:05:36,501 [wrapper] pilotpid: 876013
[2025-05-30 14:05:39] 2025-05-30 14:05:36,524 [wrapper] Pilot exit status: 0
[2025-05-30 14:05:39] 2025-05-30 14:05:36,747 [wrapper] pandaids: 6668863897
[2025-05-30 14:05:39] 2025-05-30 14:05:36,975 [wrapper] cleanup supervisor_pilot  956183 876014
[2025-05-30 14:05:39] 2025-05-30 14:05:36,989 [wrapper] Test setup, not cleaning
[2025-05-30 14:05:39] 2025-05-30 14:05:37,015 [wrapper] apfmon messages muted
[2025-05-30 14:05:39] 2025-05-30 14:05:37,045 [wrapper] ==== wrapper stdout END ====
[2025-05-30 14:05:39] 2025-05-30 14:05:37,068 [wrapper] ==== wrapper stderr END ====
[2025-05-30 14:05:39]  *** Error codes and diagnostics ***
[2025-05-30 14:05:39]     "exeErrorCode": 0,
[2025-05-30 14:05:39]     "exeErrorDiag": "",
[2025-05-30 14:05:39]     "pilotErrorCode": 0,
[2025-05-30 14:05:39]     "pilotErrorDiag": "",
[2025-05-30 14:05:39]  *** Listing of results directory ***
[2025-05-30 14:05:39] total 416568
[2025-05-30 14:05:39] -rw-r--r-- 1 boinc boinc    495897 May 28 20:14 pilot3.tar.gz
[2025-05-30 14:05:39] -rw-r--r-- 1 boinc boinc      5111 May 28 20:44 queuedata.json
[2025-05-30 14:05:39] -rwx------ 1 boinc boinc     37140 May 28 20:44 runpilot2-wrapper.sh
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc       100 May 30 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 14:05:39] -rwxr-xr-x 1 boinc boinc      7986 May 30 11:30 run_atlas
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc       105 May 30 11:30 job.xml
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc      9446 May 30 11:30 init_data.xml
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc 225683469 May 30 11:30 EVNT.44871834._003508.pool.root.1
[2025-05-30 14:05:39] drwxrwx--x 2 boinc boinc      4096 May 30 11:30 shared
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc    508881 May 30 11:30 input.tar.gz
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc     15093 May 30 11:30 start_atlas.sh
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc         0 May 30 11:30 boinc_lockfile
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc      2559 May 30 11:30 pandaJob.out
[2025-05-30 14:05:39] -rw------- 1 boinc boinc    988014 May 30 11:32 agis_schedconf.cvmfs.json
[2025-05-30 14:05:39] -rw------- 1 boinc boinc   1603667 May 30 11:32 agis_ddmendpoints.agis.ALL.json
[2025-05-30 14:05:39] drwx------ 4 boinc boinc      4096 May 30 11:32 pilot3
[2025-05-30 14:05:39] -rw------- 1 boinc boinc 194493841 May 30 13:58 HITS.44871837._090147.pool.root.1
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc       529 May 30 14:02 boinc_task_state.xml
[2025-05-30 14:05:39] -rw------- 1 boinc boinc      1040 May 30 14:04 memory_monitor_summary.json
[2025-05-30 14:05:39] -rw------- 1 boinc boinc        95 May 30 14:04 pilot_heartbeat.json
[2025-05-30 14:05:39] -rw------- 1 boinc boinc    401446 May 30 14:04 log.44871837._090147.job.log.tgz.1
[2025-05-30 14:05:39] -rw------- 1 boinc boinc      7718 May 30 14:05 heartbeat.json
[2025-05-30 14:05:39] -rw------- 1 boinc boinc      4377 May 30 14:05 pilotlog.txt
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc      8192 May 30 14:05 boinc_mmap_file
[2025-05-30 14:05:39] -rw------- 1 boinc boinc    868372 May 30 14:05 log.44871837._090147.job.log.1
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc        27 May 30 14:05 wrapper_checkpoint.txt
[2025-05-30 14:05:39] -rw------- 1 boinc boinc       357 May 30 14:05 output.list
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc       620 May 30 14:05 runtime_log
[2025-05-30 14:05:39] -rw------- 1 boinc boinc   1290240 May 30 14:05 result.tar.gz
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc      8973 May 30 14:05 runtime_log.err
[2025-05-30 14:05:39] -rw------- 1 boinc boinc       661 May 30 14:05 31bKDmMoce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB6TKDmQMZr5m.diag
[2025-05-30 14:05:39] -rw-rw-r-- 1 boinc boinc     20648 May 30 14:05 stderr.txt
[2025-05-30 14:05:39] HITS file was successfully produced:
[2025-05-30 14:05:39] -rw------- 1 boinc boinc 194493841 May 30 13:58 shared/HITS.pool.root.1
[2025-05-30 14:05:39]  *** Contents of shared directory: ***
[2025-05-30 14:05:39] total 412116
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc 225683469 May 30 11:30 ATLAS.root_0
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc    508881 May 30 11:30 input.tar.gz
[2025-05-30 14:05:39] -rw-r--r-- 2 boinc boinc     15093 May 30 11:30 start_atlas.sh
[2025-05-30 14:05:39] -rw------- 1 boinc boinc 194493841 May 30 13:58 HITS.pool.root.1
[2025-05-30 14:05:39] -rw------- 1 boinc boinc   1290240 May 30 14:05 result.tar.gz
14:05:41 (872306): run_atlas exited; CPU time 45401.786287
14:05:41 (872306): called boinc_finish(0)

</stderr_txt>
]]>

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