Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:37:43 (2722): wrapper (7.7.26015): starting
20:37:43 (2722): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 20:37:43] Arguments: --nthreads 8
[2025-05-29 20:37:43] Threads: 8
[2025-05-29 20:37:43] Checking for CVMFS
[2025-05-29 20:37:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 20:37:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 20:37:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 20:37:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 20:37:44] 2.11.2.0 27033 25049 97572 146572 2 114 15937982 25165824 4353 130560 0 13630969 99.790 15099358 2030 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 20:37:44] CVMFS is ok
[2025-05-29 20:37:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 20:37:44] Checking for apptainer binary...
[2025-05-29 20:37:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 20:37:44] Running /usr/bin/apptainer --version
[2025-05-29 20:37:45] apptainer version 1.3.2-1.el7
[2025-05-29 20:37:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 20:37:46] cg-vwn443.simple-grid.lan
[2025-05-29 20:37:46] apptainer works
[2025-05-29 20:37:46] Set ATHENA_PROC_NUMBER=8
[2025-05-29 20:37:46] Set ATHENA_CORE_NUMBER=8
[2025-05-29 20:37:46] Starting ATLAS job with PandaID=6668863667
[2025-05-29 20:37:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 05:57:08]  *** The last 200 lines of the pilot log: ***
[2025-05-30 05:57:08] 2025-05-29 23:39:37,249 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6668863667/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,250 | INFO     | extracted standard info from prmon json
[2025-05-30 05:57:08] 2025-05-29 23:39:37,250 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 05:57:08] 2025-05-29 23:39:37,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 05:57:08] 2025-05-29 23:39:37,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 05:57:08] 2025-05-29 23:39:37,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 05:57:08] 2025-05-29 23:39:37,256 | INFO     | fitting pss+swap vs Time
[2025-05-30 05:57:08] 2025-05-29 23:39:37,257 | INFO     | sum of square deviations: 7879803557.5
[2025-05-30 05:57:08] 2025-05-29 23:39:37,266 | INFO     | sum of deviations: -20953141411.500015
[2025-05-30 05:57:08] 2025-05-29 23:39:37,266 | INFO     | mean x: 1748552884.5
[2025-05-30 05:57:08] 2025-05-29 23:39:37,267 | INFO     | mean y: 2499586.982993197
[2025-05-30 05:57:08] 2025-05-29 23:39:37,267 | INFO     | -- intersect: 4652066747.771285
[2025-05-30 05:57:08] 2025-05-29 23:39:37,267 | INFO     | intersect: 4652066747.771285
[2025-05-30 05:57:08] 2025-05-29 23:39:37,267 | INFO     | chi2: 2.4673862285326713
[2025-05-30 05:57:08] 2025-05-29 23:39:37,268 | INFO     | sum of square deviations: 7484568240.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,271 | INFO     | sum of deviations: -1226745258.0000002
[2025-05-30 05:57:08] 2025-05-29 23:39:37,271 | INFO     | mean x: 1748552732.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,271 | INFO     | mean y: 2507094.422145329
[2025-05-30 05:57:08] 2025-05-29 23:39:37,271 | INFO     | -- intersect: 289100616.39448893
[2025-05-30 05:57:08] 2025-05-29 23:39:37,271 | INFO     | intersect: 289100616.39448893
[2025-05-30 05:57:08] 2025-05-29 23:39:37,272 | INFO     | chi2: 1.6946277101395852
[2025-05-30 05:57:08] 2025-05-29 23:39:37,272 | INFO     | current chi2=1.6946277101395852 (change=31.3189118694497 %)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,272 | INFO     | sum of square deviations: 7102775035.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,275 | INFO     | sum of deviations: -1353159492.5000234
[2025-05-30 05:57:08] 2025-05-29 23:39:37,275 | INFO     | mean x: 1748552579.5
[2025-05-30 05:57:08] 2025-05-29 23:39:37,275 | INFO     | mean y: 2507043.9330985914
[2025-05-30 05:57:08] 2025-05-29 23:39:37,276 | INFO     | -- intersect: 335626213.4727019
[2025-05-30 05:57:08] 2025-05-29 23:39:37,276 | INFO     | intersect: 335626213.4727019
[2025-05-30 05:57:08] 2025-05-29 23:39:37,276 | INFO     | chi2: 1.694412984036396
[2025-05-30 05:57:08] 2025-05-29 23:39:37,276 | INFO     | current chi2=1.694412984036396 (change=0.012670989734471061 %)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,276 | INFO     | right removable region: 283
[2025-05-30 05:57:08] 2025-05-29 23:39:37,285 | INFO     | sum of square deviations: 7484568240.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,288 | INFO     | sum of deviations: -66475280944.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,288 | INFO     | mean x: 1748553037.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,288 | INFO     | mean y: 2517018.8858131487
[2025-05-30 05:57:08] 2025-05-29 23:39:37,289 | INFO     | -- intersect: 15532545024.89133
[2025-05-30 05:57:08] 2025-05-29 23:39:37,289 | INFO     | intersect: 15532545024.89133
[2025-05-30 05:57:08] 2025-05-29 23:39:37,289 | INFO     | chi2: 1.0014214940547599
[2025-05-30 05:57:08] 2025-05-29 23:39:37,289 | INFO     | current chi2=1.0014214940547599 (change=59.413670933460025 %)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,290 | INFO     | sum of square deviations: 7102775035.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,292 | INFO     | sum of deviations: -61055132410.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,293 | INFO     | mean x: 1748553189.5
[2025-05-30 05:57:08] 2025-05-29 23:39:37,293 | INFO     | mean y: 2514838.8873239434
[2025-05-30 05:57:08] 2025-05-29 23:39:37,293 | INFO     | -- intersect: 15032998837.716427
[2025-05-30 05:57:08] 2025-05-29 23:39:37,293 | INFO     | intersect: 15032998837.716427
[2025-05-30 05:57:08] 2025-05-29 23:39:37,293 | INFO     | chi2: 0.9893480827034986
[2025-05-30 05:57:08] 2025-05-29 23:39:37,294 | INFO     | current chi2=0.9893480827034986 (change=1.2056273430257605 %)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,294 | INFO     | left removable region: 20
[2025-05-30 05:57:08] 2025-05-29 23:39:37,294 | INFO     | sum of square deviations: 5640782972.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,307 | INFO     | sum of deviations: -23069898293.999996
[2025-05-30 05:57:08] 2025-05-29 23:39:37,307 | INFO     | mean x: 1748553159.0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,307 | INFO     | mean y: 2515128.775665399
[2025-05-30 05:57:08] 2025-05-29 23:39:37,307 | INFO     | -- intersect: 7153817304.381227
[2025-05-30 05:57:08] 2025-05-29 23:39:37,307 | INFO     | intersect: 7153817304.381227
[2025-05-30 05:57:08] 2025-05-29 23:39:37,308 | INFO     | chi2: 0.15473652950173125
[2025-05-30 05:57:08] 2025-05-29 23:39:37,308 | INFO     | -- intersect: 7153817304.381227
[2025-05-30 05:57:08] 2025-05-29 23:39:37,308 | INFO     | current memory leak: -4.09 B/s (using 263 data points, chi2=0.15)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | ..............................
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | . Timing measurements:
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | . get job = 0 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | . initial setup = 2 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | . payload setup = 14 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,309 | INFO     | . stage-in = 0 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,310 | INFO     | . payload execution = 17947 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,310 | INFO     | . stage-out = 3 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,310 | INFO     | . log creation = 1 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,310 | INFO     | ..............................
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | 
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | job summary report
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | --------------------------------------------------
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | PanDA job id: 6668863667
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | task id: 44871837
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | errors: (none)
[2025-05-30 05:57:08] 2025-05-29 23:39:37,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | pilot state: finished 
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | transexitcode: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | exeerrorcode: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | exeerrordiag: 
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | exitcode: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | exitmsg: OK
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | cpuconsumptiontime: 69319 s
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | nevents: 400
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | neventsw: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:37,520 | INFO     | pid: 12912
[2025-05-30 05:57:08] 2025-05-29 23:39:37,521 | INFO     | pgrp: 12912
[2025-05-30 05:57:08] 2025-05-29 23:39:37,528 | INFO     | corecount: 8
[2025-05-30 05:57:08] 2025-05-29 23:39:37,528 | INFO     | event service: False
[2025-05-30 05:57:08] 2025-05-29 23:39:37,528 | INFO     | sizes: {0: 2405063, 1: 2405091, 2: 2405290, 9: 2405496, 13: 2405524, 17965: 2437080, 17966: 2437207, 17970: 2446204, 17971: 2446260, 18068: 2446430}
[2025-05-30 05:57:08] 2025-05-29 23:39:37,528 | INFO     | --------------------------------------------------
[2025-05-30 05:57:08] 2025-05-29 23:39:37,528 | INFO     | 
[2025-05-30 05:57:08] 2025-05-29 23:39:37,529 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-30 05:57:08] 2025-05-29 23:39:38,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 05:57:08] 2025-05-29 23:39:38,009 | INFO     | job 6668863667 has completed (purged errors)
[2025-05-30 05:57:08] 2025-05-29 23:39:38,009 | INFO     | overall cleanup function is called
[2025-05-30 05:57:08] 2025-05-29 23:39:39,019 | INFO     | --- collectZombieJob: --- 10, [12912]
[2025-05-30 05:57:08] 2025-05-29 23:39:39,019 | INFO     | zombie collector waiting for pid 12912
[2025-05-30 05:57:08] 2025-05-29 23:39:39,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 05:57:08] 2025-05-29 23:39:39,019 | INFO     | collected zombie processes
[2025-05-30 05:57:08] 2025-05-29 23:39:39,019 | INFO     | will attempt to kill all subprocesses of pid=12912
[2025-05-30 05:57:08] 2025-05-29 23:39:39,137 | INFO     | process IDs to be killed: [12912] (in reverse order)
[2025-05-30 05:57:08] 2025-05-29 23:39:39,807 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 05:57:08] 2025-05-29 23:39:39,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 05:57:08] 2025-05-29 23:39:39,811 | INFO     | did not find any defunct processes belonging to 12912
[2025-05-30 05:57:08] 2025-05-29 23:39:39,814 | INFO     | did not find any defunct processes belonging to 12912
[2025-05-30 05:57:08] 2025-05-29 23:39:39,814 | INFO     | ready for new job
[2025-05-30 05:57:08] 2025-05-29 23:39:39,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 05:57:08] 2025-05-29 23:39:39,817 | INFO     | **************************************
[2025-05-30 05:57:08] 2025-05-29 23:39:39,817 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 05:57:08] 2025-05-29 23:39:39,817 | INFO     | **************************************
[2025-05-30 05:57:08] 2025-05-29 23:39:39,817 | INFO     | 
[2025-05-30 05:57:08] 2025-05-29 23:39:39,818 | INFO     | pilot is running in a VM
[2025-05-30 05:57:08] 2025-05-29 23:39:39,818 | INFO     | architecture information:
[2025-05-30 05:57:08] 2025-05-29 23:39:39,829 | INFO     | executing command: cat /etc/os-release
[2025-05-30 05:57:08] 2025-05-29 23:39:40,088 | INFO     | cat /etc/os-release:
[2025-05-30 05:57:08] NAME="CentOS Linux"
[2025-05-30 05:57:08] VERSION="7 (Core)"
[2025-05-30 05:57:08] ID="centos"
[2025-05-30 05:57:08] ID_LIKE="rhel fedora"
[2025-05-30 05:57:08] VERSION_ID="7"
[2025-05-30 05:57:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 05:57:08] ANSI_COLOR="0;31"
[2025-05-30 05:57:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 05:57:08] HOME_URL="https://www.centos.org/"
[2025-05-30 05:57:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 05:57:08] 
[2025-05-30 05:57:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 05:57:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 05:57:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 05:57:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 05:57:08] 
[2025-05-30 05:57:08] 2025-05-29 23:39:40,089 | INFO     | **************************************
[2025-05-30 05:57:08] 2025-05-29 23:39:40,594 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-30 05:57:08] 2025-05-29 23:39:40,808 | INFO     | sufficient remaining disk space (495934504960 B)
[2025-05-30 05:57:08] 2025-05-29 23:39:40,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 05:57:08] 2025-05-29 23:39:40,808 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 05:57:08] 2025-05-29 23:39:40,808 | INFO     | update_server=False
[2025-05-30 05:57:08] 2025-05-29 23:39:40,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 05:57:08] 2025-05-29 23:39:40,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 05:57:08] 2025-05-29 23:39:40,809 | INFO     | aborting loop
[2025-05-30 05:57:08] 2025-05-29 23:39:40,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 05:57:08] 2025-05-29 23:39:40,890 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 05:57:08] 2025-05-29 23:39:40,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 05:57:08] 2025-05-29 23:39:40,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 05:57:08] 2025-05-29 23:39:40,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 05:57:08] 2025-05-29 23:39:41,480 | INFO     | all data control threads have been joined
[2025-05-30 05:57:08] 2025-05-29 23:39:41,664 | INFO     | all payload control threads have been joined
[2025-05-30 05:57:08] 2025-05-29 23:39:41,813 | INFO     | [job] retrieve thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:41,816 | INFO     | [job] job monitor thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:41,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,169 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,242 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,328 | INFO     | all job control threads have been joined
[2025-05-30 05:57:08] 2025-05-29 23:39:42,362 | INFO     | [job] validate thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,372 | INFO     | [payload] validate_post thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,404 | INFO     | [payload] failed_post thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,486 | INFO     | [data] control thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 05:57:08] 2025-05-29 23:39:42,670 | INFO     | [payload] control thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,820 | INFO     | [data] copytool_out thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:42,889 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:43,060 | INFO     | [data] copytool_in thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:43,334 | INFO     | [job] control thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:43,541 | INFO     | [job] queue monitor thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:44,908 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 05:57:08] 2025-05-29 23:39:45,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370446202688)>', '<ExcThread(monitor, started 140370151184128)>']
[2025-05-30 05:57:08] 2025-05-29 23:39:45,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 05:57:08] 2025-05-29 23:39:45,919 | INFO     | [monitor] control thread has ended
[2025-05-30 05:57:08] 2025-05-29 23:39:50,758 | INFO     | all workflow threads have been joined
[2025-05-30 05:57:08] 2025-05-29 23:39:50,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 05:57:08] 2025-05-29 23:39:50,758 | INFO     | traces error code: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:50,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 05:57:08] 2025-05-29 23:39:51,007 [wrapper] ==== pilot stdout END ====
[2025-05-30 05:57:08] 2025-05-29 23:39:51,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 05:57:08] 2025-05-29 23:39:51,217 [wrapper] pilotpid: 6399
[2025-05-30 05:57:08] 2025-05-29 23:39:51,299 [wrapper] Pilot exit status: 0
[2025-05-30 05:57:08] 2025-05-29 23:39:51,790 [wrapper] pandaids: 6668863667
[2025-05-30 05:57:08] 2025-05-29 23:39:52,302 [wrapper] cleanup supervisor_pilot 26739 6400
[2025-05-30 05:57:08] 2025-05-29 23:39:52,413 [wrapper] Test setup, not cleaning
[2025-05-30 05:57:08] 2025-05-29 23:39:52,500 [wrapper] apfmon messages muted
[2025-05-30 05:57:08] 2025-05-29 23:39:52,586 [wrapper] ==== wrapper stdout END ====
[2025-05-30 05:57:08] 2025-05-29 23:39:52,671 [wrapper] ==== wrapper stderr END ====
[2025-05-30 05:57:08]  *** Error codes and diagnostics ***
[2025-05-30 05:57:08]     "exeErrorCode": 0,
[2025-05-30 05:57:08]     "exeErrorDiag": "",
[2025-05-30 05:57:08]     "pilotErrorCode": 0,
[2025-05-30 05:57:08]     "pilotErrorDiag": "",
[2025-05-30 05:57:08]  *** Listing of results directory ***
[2025-05-30 05:57:08] total 420960
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc    495897 May 28 22:14 pilot3.tar.gz
[2025-05-30 05:57:08] -rwx------. 1 boinc boinc     37140 May 28 22:40 runpilot2-wrapper.sh
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc      5111 May 28 22:40 queuedata.json
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc       100 May 29 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 05:57:08] -rwxr-xr-x. 1 boinc boinc      7986 May 29 20:37 run_atlas
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc       105 May 29 20:37 job.xml
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc 225736704 May 29 20:37 EVNT.44871834._003505.pool.root.1
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc    508876 May 29 20:37 input.tar.gz
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc      6371 May 29 20:37 init_data.xml
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc     15093 May 29 20:37 start_atlas.sh
[2025-05-30 05:57:08] drwxrwx--x. 2 boinc boinc        68 May 29 20:37 shared
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc         0 May 29 20:37 boinc_lockfile
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc      2559 May 29 20:37 pandaJob.out
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc    992706 May 29 20:38 agis_schedconf.cvmfs.json
[2025-05-30 05:57:08] drwx------. 4 boinc boinc      4096 May 29 20:38 pilot3
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc 197586827 May 30 01:36 HITS.44871837._090070.pool.root.1
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc       531 May 30 01:36 boinc_task_state.xml
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc      1018 May 30 01:37 memory_monitor_summary.json
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc   1603667 May 30 01:37 agis_ddmendpoints.agis.ALL.json
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc    411922 May 30 01:37 log.44871837._090070.job.log.tgz.1
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc        95 May 30 01:39 pilot_heartbeat.json
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc      7690 May 30 01:39 heartbeat.json
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc      4416 May 30 01:39 pilotlog.txt
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc   1540247 May 30 01:39 log.44871837._090070.job.log.1
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc       357 May 30 01:39 output.list
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc       620 May 30 01:39 runtime_log
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc   1976320 May 30 01:39 result.tar.gz
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc      8659 May 30 01:39 runtime_log.err
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc       657 May 30 01:39 hCqKDm9kce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5TKDmSYFUJn.diag
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc      8192 May 30 05:57 boinc_mmap_file
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc        28 May 30 05:57 wrapper_checkpoint.txt
[2025-05-30 05:57:08] -rw-r--r--. 1 boinc boinc     20513 May 30 05:57 stderr.txt
[2025-05-30 05:57:08] HITS file was successfully produced:
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc 197586827 May 30 01:36 shared/HITS.pool.root.1
[2025-05-30 05:57:08]  *** Contents of shared directory: ***
[2025-05-30 05:57:08] total 415852
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc 225736704 May 29 20:37 ATLAS.root_0
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc    508876 May 29 20:37 input.tar.gz
[2025-05-30 05:57:08] -rw-r--r--. 2 boinc boinc     15093 May 29 20:37 start_atlas.sh
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc 197586827 May 30 01:36 HITS.pool.root.1
[2025-05-30 05:57:08] -rw-------. 1 boinc boinc   1976320 May 30 01:39 result.tar.gz
05:57:10 (2722): run_atlas exited; CPU time 69559.922579
05:57:10 (2722): called boinc_finish(0)

</stderr_txt>
]]>

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