Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:41:59 (29263): wrapper (7.7.26015): starting
17:41:59 (29263): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 17:41:59] Arguments: --nthreads 8
[2025-05-29 17:41:59] Threads: 8
[2025-05-29 17:41:59] Checking for CVMFS
[2025-05-29 17:42:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 17:42:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 17:42:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 17:42:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 17:42:01] 2.11.2.0 13816 24784 88364 146567 3 114 15839560 25165824 4353 130560 0 13101261 99.797 14769400 2104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 17:42:01] CVMFS is ok
[2025-05-29 17:42:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 17:42:01] Checking for apptainer binary...
[2025-05-29 17:42:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 17:42:01] Running /usr/bin/apptainer --version
[2025-05-29 17:42:01] apptainer version 1.3.2-1.el7
[2025-05-29 17:42:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 17:42:02] cg-vwn369.simple-grid.lan
[2025-05-29 17:42:02] apptainer works
[2025-05-29 17:42:02] Set ATHENA_PROC_NUMBER=8
[2025-05-29 17:42:02] Set ATHENA_CORE_NUMBER=8
[2025-05-29 17:42:02] Starting ATLAS job with PandaID=6668688857
[2025-05-29 17:42:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 23:24:36]  *** The last 200 lines of the pilot log: ***
[2025-05-29 23:24:36] 2025-05-29 21:00:49,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 23:24:36] 2025-05-29 21:00:49,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 23:24:36] 2025-05-29 21:00:49,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 23:24:36] 2025-05-29 21:00:49,615 | INFO     | fitting pss+swap vs Time
[2025-05-29 23:24:36] 2025-05-29 21:00:49,616 | INFO     | sum of square deviations: 9327281860.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,619 | INFO     | sum of deviations: -14906652228.000004
[2025-05-29 23:24:36] 2025-05-29 21:00:49,619 | INFO     | mean x: 1748542852.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,619 | INFO     | mean y: 2503809.4565916397
[2025-05-29 23:24:36] 2025-05-29 21:00:49,619 | INFO     | -- intersect: 2796985695.1492023
[2025-05-29 23:24:36] 2025-05-29 21:00:49,619 | INFO     | intersect: 2796985695.1492023
[2025-05-29 23:24:36] 2025-05-29 21:00:49,620 | INFO     | chi2: 2.4391523842793768
[2025-05-29 23:24:36] 2025-05-29 21:00:49,620 | INFO     | sum of square deviations: 8884603792.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,623 | INFO     | sum of deviations: 5825968571.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,624 | INFO     | mean x: 1748542699.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,624 | INFO     | mean y: 2510858.885620915
[2025-05-29 23:24:36] 2025-05-29 21:00:49,624 | INFO     | -- intersect: -1144074295.7402003
[2025-05-29 23:24:36] 2025-05-29 21:00:49,624 | INFO     | intersect: -1144074295.7402003
[2025-05-29 23:24:36] 2025-05-29 21:00:49,624 | INFO     | chi2: 1.6695137915201432
[2025-05-29 23:24:36] 2025-05-29 21:00:49,625 | INFO     | current chi2=1.6695137915201432 (change=31.553526451223156 %)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,625 | INFO     | sum of square deviations: 8456158550.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,628 | INFO     | sum of deviations: 5539703105.000021
[2025-05-29 23:24:36] 2025-05-29 21:00:49,628 | INFO     | mean x: 1748542547.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,628 | INFO     | mean y: 2510756.980066445
[2025-05-29 23:24:36] 2025-05-29 21:00:49,629 | INFO     | -- intersect: -1142974692.4194772
[2025-05-29 23:24:36] 2025-05-29 21:00:49,629 | INFO     | intersect: -1142974692.4194772
[2025-05-29 23:24:36] 2025-05-29 21:00:49,629 | INFO     | chi2: 1.6695088481507439
[2025-05-29 23:24:36] 2025-05-29 21:00:49,629 | INFO     | current chi2=1.6695088481507439 (change=0.0002960963499965077 %)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,629 | INFO     | right removable region: 300
[2025-05-29 23:24:36] 2025-05-29 21:00:49,630 | INFO     | sum of square deviations: 8884603792.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,633 | INFO     | sum of deviations: -62935005186.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,633 | INFO     | mean x: 1748543004.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,633 | INFO     | mean y: 2520236.2124183006
[2025-05-29 23:24:36] 2025-05-29 21:00:49,633 | INFO     | -- intersect: 12388504532.993402
[2025-05-29 23:24:36] 2025-05-29 21:00:49,633 | INFO     | intersect: 12388504532.993402
[2025-05-29 23:24:36] 2025-05-29 21:00:49,634 | INFO     | chi2: 0.9869231232762519
[2025-05-29 23:24:36] 2025-05-29 21:00:49,634 | INFO     | current chi2=0.9869231232762519 (change=59.538275278039734 %)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,635 | INFO     | sum of square deviations: 8456158550.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,637 | INFO     | sum of deviations: -65019098826.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,638 | INFO     | mean x: 1748543157.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,638 | INFO     | mean y: 2520965.5681063123
[2025-05-29 23:24:36] 2025-05-29 21:00:49,638 | INFO     | -- intersect: 13447006384.601437
[2025-05-29 23:24:36] 2025-05-29 21:00:49,638 | INFO     | intersect: 13447006384.601437
[2025-05-29 23:24:36] 2025-05-29 21:00:49,638 | INFO     | chi2: 0.9694281832202238
[2025-05-29 23:24:36] 2025-05-29 21:00:49,639 | INFO     | current chi2=0.9694281832202238 (change=1.7726750588182318 %)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,639 | INFO     | left removable region: 20
[2025-05-29 23:24:36] 2025-05-29 21:00:49,639 | INFO     | sum of square deviations: 6806862510.0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,642 | INFO     | sum of deviations: -24459501565.500004
[2025-05-29 23:24:36] 2025-05-29 21:00:49,642 | INFO     | mean x: 1748543126.5
[2025-05-29 23:24:36] 2025-05-29 21:00:49,642 | INFO     | mean y: 2521102.5964285713
[2025-05-29 23:24:36] 2025-05-29 21:00:49,642 | INFO     | -- intersect: 6285664515.1656685
[2025-05-29 23:24:36] 2025-05-29 21:00:49,642 | INFO     | intersect: 6285664515.1656685
[2025-05-29 23:24:36] 2025-05-29 21:00:49,643 | INFO     | chi2: 0.13610245418026828
[2025-05-29 23:24:36] 2025-05-29 21:00:49,643 | INFO     | -- intersect: 6285664515.1656685
[2025-05-29 23:24:36] 2025-05-29 21:00:49,643 | INFO     | current memory leak: -3.59 B/s (using 280 data points, chi2=0.14)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | ..............................
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | . Timing measurements:
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | . get job = 0 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | . initial setup = 2 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | . payload setup = 14 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,644 | INFO     | . stage-in = 0 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,645 | INFO     | . payload execution = 18963 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,645 | INFO     | . stage-out = 3 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,645 | INFO     | . log creation = 1 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,645 | INFO     | ..............................
[2025-05-29 23:24:36] 2025-05-29 21:00:49,771 | INFO     | 
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | job summary report
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | --------------------------------------------------
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | PanDA job id: 6668688857
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | task id: 44871837
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | errors: (none)
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | pilot state: finished 
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | transexitcode: 0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,772 | INFO     | exeerrorcode: 0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | exeerrordiag: 
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | exitcode: 0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | exitmsg: OK
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | cpuconsumptiontime: 72529 s
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | nevents: 400
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | neventsw: 0
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | pid: 8091
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | pgrp: 8091
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | corecount: 8
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | event service: False
[2025-05-29 23:24:36] 2025-05-29 21:00:49,773 | INFO     | sizes: {0: 2405234, 1: 2405234, 8: 2405468, 12: 2405496, 18983: 2437358, 18988: 2446299, 18990: 2446483, 19090: 2446653}
[2025-05-29 23:24:36] 2025-05-29 21:00:49,779 | INFO     | --------------------------------------------------
[2025-05-29 23:24:36] 2025-05-29 21:00:49,779 | INFO     | 
[2025-05-29 23:24:36] 2025-05-29 21:00:49,779 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-29 23:24:36] 2025-05-29 21:00:50,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 23:24:36] 2025-05-29 21:00:50,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 23:24:36] 2025-05-29 21:00:50,188 | INFO     | job 6668688857 has completed (purged errors)
[2025-05-29 23:24:36] 2025-05-29 21:00:50,188 | INFO     | overall cleanup function is called
[2025-05-29 23:24:36] 2025-05-29 21:00:51,198 | INFO     | --- collectZombieJob: --- 10, [8091]
[2025-05-29 23:24:36] 2025-05-29 21:00:51,198 | INFO     | zombie collector waiting for pid 8091
[2025-05-29 23:24:36] 2025-05-29 21:00:51,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 23:24:36] 2025-05-29 21:00:51,198 | INFO     | collected zombie processes
[2025-05-29 23:24:36] 2025-05-29 21:00:51,198 | INFO     | will attempt to kill all subprocesses of pid=8091
[2025-05-29 23:24:36] 2025-05-29 21:00:51,335 | INFO     | process IDs to be killed: [8091] (in reverse order)
[2025-05-29 23:24:36] 2025-05-29 21:00:52,388 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 23:24:36] 2025-05-29 21:00:52,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 23:24:36] 2025-05-29 21:00:52,392 | INFO     | did not find any defunct processes belonging to 8091
[2025-05-29 23:24:36] 2025-05-29 21:00:52,395 | INFO     | did not find any defunct processes belonging to 8091
[2025-05-29 23:24:36] 2025-05-29 21:00:52,395 | INFO     | ready for new job
[2025-05-29 23:24:36] 2025-05-29 21:00:52,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 23:24:36] 2025-05-29 21:00:52,398 | INFO     | **************************************
[2025-05-29 23:24:36] 2025-05-29 21:00:52,398 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 23:24:36] 2025-05-29 21:00:52,398 | INFO     | **************************************
[2025-05-29 23:24:36] 2025-05-29 21:00:52,398 | INFO     | 
[2025-05-29 23:24:36] 2025-05-29 21:00:52,399 | INFO     | pilot is running in a VM
[2025-05-29 23:24:36] 2025-05-29 21:00:52,399 | INFO     | architecture information:
[2025-05-29 23:24:36] 2025-05-29 21:00:52,400 | INFO     | executing command: cat /etc/os-release
[2025-05-29 23:24:36] 2025-05-29 21:00:52,561 | INFO     | cat /etc/os-release:
[2025-05-29 23:24:36] NAME="CentOS Linux"
[2025-05-29 23:24:36] VERSION="7 (Core)"
[2025-05-29 23:24:36] ID="centos"
[2025-05-29 23:24:36] ID_LIKE="rhel fedora"
[2025-05-29 23:24:36] VERSION_ID="7"
[2025-05-29 23:24:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 23:24:36] ANSI_COLOR="0;31"
[2025-05-29 23:24:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 23:24:36] HOME_URL="https://www.centos.org/"
[2025-05-29 23:24:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 23:24:36] 
[2025-05-29 23:24:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 23:24:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 23:24:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 23:24:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 23:24:36] 
[2025-05-29 23:24:36] 2025-05-29 21:00:52,561 | INFO     | **************************************
[2025-05-29 23:24:36] 2025-05-29 21:00:53,065 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-29 23:24:36] 2025-05-29 21:00:53,287 | INFO     | sufficient remaining disk space (495881027584 B)
[2025-05-29 23:24:36] 2025-05-29 21:00:53,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 23:24:36] 2025-05-29 21:00:53,288 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 23:24:36] 2025-05-29 21:00:53,288 | INFO     | update_server=False
[2025-05-29 23:24:36] 2025-05-29 21:00:53,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 23:24:36] 2025-05-29 21:00:53,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 23:24:36] 2025-05-29 21:00:53,670 | INFO     | PID=509 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-05-29 23:24:36] 2025-05-29 21:00:53,670 | INFO     | .. there are 9 such processes running
[2025-05-29 23:24:36] 2025-05-29 21:00:53,671 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 23:24:36] 2025-05-29 21:00:53,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 23:24:36] 2025-05-29 21:00:53,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 23:24:36] 2025-05-29 21:00:54,032 | INFO     | all job control threads have been joined
[2025-05-29 23:24:36] 2025-05-29 21:00:54,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 23:24:36] 2025-05-29 21:00:54,169 | INFO     | aborting loop
[2025-05-29 23:24:36] 2025-05-29 21:00:54,243 | INFO     | all data control threads have been joined
[2025-05-29 23:24:36] 2025-05-29 21:00:54,294 | INFO     | [job] retrieve thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:54,538 | INFO     | all payload control threads have been joined
[2025-05-29 23:24:36] 2025-05-29 21:00:54,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 23:24:36] 2025-05-29 21:00:54,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 23:24:36] 2025-05-29 21:00:54,885 | INFO     | [payload] validate_post thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:54,979 | INFO     | [data] copytool_in thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:54,988 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,037 | INFO     | [job] control thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,175 | INFO     | [job] job monitor thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,248 | INFO     | [data] control thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,500 | INFO     | [data] copytool_out thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,544 | INFO     | [payload] control thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,572 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,632 | INFO     | [payload] failed_post thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,634 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,690 | INFO     | [job] validate thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:55,794 | INFO     | [job] queue monitor thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:00:58,838 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:01:04,185 | INFO     | job.realtimelogging is not enabled
[2025-05-29 23:24:36] 2025-05-29 21:01:05,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 23:24:36] 2025-05-29 21:01:06,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048232077120)>', '<ExcThread(monitor, started 140047768594176)>']
[2025-05-29 23:24:36] 2025-05-29 21:01:06,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 23:24:36] 2025-05-29 21:01:06,749 | INFO     | [monitor] control thread has ended
[2025-05-29 23:24:36] 2025-05-29 21:01:11,505 | INFO     | all workflow threads have been joined
[2025-05-29 23:24:36] 2025-05-29 21:01:11,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 23:24:36] 2025-05-29 21:01:11,505 | INFO     | traces error code: 0
[2025-05-29 23:24:36] 2025-05-29 21:01:11,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 23:24:36] 2025-05-29 21:01:11,912 [wrapper] ==== pilot stdout END ====
[2025-05-29 23:24:36] 2025-05-29 21:01:12,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 23:24:36] 2025-05-29 21:01:12,156 [wrapper] pilotpid: 509
[2025-05-29 23:24:36] 2025-05-29 21:01:12,280 [wrapper] Pilot exit status: 0
[2025-05-29 23:24:36] 2025-05-29 21:01:12,656 [wrapper] pandaids: 6668688857
[2025-05-29 23:24:36] 2025-05-29 21:01:13,218 [wrapper] cleanup supervisor_pilot 29770 510
[2025-05-29 23:24:36] 2025-05-29 21:01:13,265 [wrapper] Test setup, not cleaning
[2025-05-29 23:24:36] 2025-05-29 21:01:13,371 [wrapper] apfmon messages muted
[2025-05-29 23:24:36] 2025-05-29 21:01:13,452 [wrapper] ==== wrapper stdout END ====
[2025-05-29 23:24:36] 2025-05-29 21:01:13,496 [wrapper] ==== wrapper stderr END ====
[2025-05-29 23:24:36]  *** Error codes and diagnostics ***
[2025-05-29 23:24:36]     "exeErrorCode": 0,
[2025-05-29 23:24:36]     "exeErrorDiag": "",
[2025-05-29 23:24:36]     "pilotErrorCode": 0,
[2025-05-29 23:24:36]     "pilotErrorDiag": "",
[2025-05-29 23:24:36]  *** Listing of results directory ***
[2025-05-29 23:24:36] total 424420
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc    495897 May 28 18:21 pilot3.tar.gz
[2025-05-29 23:24:36] -rwx------. 1 boinc boinc     37140 May 28 18:36 runpilot2-wrapper.sh
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc      5111 May 28 18:36 queuedata.json
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc       100 May 29 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 23:24:36] -rwxr-xr-x. 1 boinc boinc      7986 May 29 17:41 run_atlas
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc       105 May 29 17:41 job.xml
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc      6371 May 29 17:41 init_data.xml
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc 224650531 May 29 17:41 EVNT.44871834._003395.pool.root.1
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc     15093 May 29 17:41 start_atlas.sh
[2025-05-29 23:24:36] drwxrwx--x. 2 boinc boinc        68 May 29 17:41 shared
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc    508873 May 29 17:41 input.tar.gz
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc         0 May 29 17:41 boinc_lockfile
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc      2559 May 29 17:42 pandaJob.out
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc    992701 May 29 17:42 agis_schedconf.cvmfs.json
[2025-05-29 23:24:36] drwx------. 4 boinc boinc      4096 May 29 17:42 pilot3
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc 202034842 May 29 22:57 HITS.44871837._087156.pool.root.1
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc       531 May 29 22:57 boinc_task_state.xml
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc      1020 May 29 22:58 memory_monitor_summary.json
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc   1603667 May 29 22:59 agis_ddmendpoints.agis.ALL.json
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc    420251 May 29 22:59 log.44871837._087156.job.log.tgz.1
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc        95 May 29 23:00 pilot_heartbeat.json
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc      7690 May 29 23:00 heartbeat.json
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc      4878 May 29 23:01 pilotlog.txt
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc   1625370 May 29 23:01 log.44871837._087156.job.log.1
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc       357 May 29 23:01 output.list
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc       620 May 29 23:01 runtime_log
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc   2068480 May 29 23:01 result.tar.gz
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc      8659 May 29 23:01 runtime_log.err
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc       657 May 29 23:01 Fu0NDmQwYe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCmTKDmhswu0n.diag
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc      8192 May 29 23:24 boinc_mmap_file
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc        28 May 29 23:24 wrapper_checkpoint.txt
[2025-05-29 23:24:36] -rw-r--r--. 1 boinc boinc     20532 May 29 23:24 stderr.txt
[2025-05-29 23:24:36] HITS file was successfully produced:
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc 202034842 May 29 22:57 shared/HITS.pool.root.1
[2025-05-29 23:24:36]  *** Contents of shared directory: ***
[2025-05-29 23:24:36] total 419224
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc 224650531 May 29 17:41 ATLAS.root_0
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc     15093 May 29 17:41 start_atlas.sh
[2025-05-29 23:24:36] -rw-r--r--. 2 boinc boinc    508873 May 29 17:41 input.tar.gz
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc 202034842 May 29 22:57 HITS.pool.root.1
[2025-05-29 23:24:36] -rw-------. 1 boinc boinc   2068480 May 29 23:01 result.tar.gz
23:24:38 (29263): run_atlas exited; CPU time 72766.634265
23:24:38 (29263): called boinc_finish(0)

</stderr_txt>
]]>

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