Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:49 (2979402): wrapper (7.7.26015): starting
16:15:49 (2979402): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 16:15:49] Arguments: --nthreads 4
[2025-06-04 16:15:49] Threads: 4
[2025-06-04 16:15:49] Checking for CVMFS
[2025-06-04 16:15:49] No cvmfs_config command found, will try listing directly
[2025-06-04 16:15:49] CVMFS is ok
[2025-06-04 16:15:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:15:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:15:49] Further information can be found at the LHC@home message board.
[2025-06-04 16:15:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:15:49] Checking for apptainer binary...
[2025-06-04 16:15:49] which: no apptainer in ((null))
[2025-06-04 16:15:49] apptainer is not installed, using version from CVMFS
[2025-06-04 16:15:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:15:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-04 16:15:50] apptainer works
[2025-06-04 16:15:50] Set ATHENA_PROC_NUMBER=4
[2025-06-04 16:15:50] Set ATHENA_CORE_NUMBER=4
[2025-06-04 16:15:50] Starting ATLAS job with PandaID=6668980126
[2025-06-04 16:15:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:27:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:27:37] 2025-06-04 17:26:18,930 | INFO     | mean x: 1749052270.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,930 | INFO     | mean y: 2292035.893048128
[2025-06-04 19:27:37] 2025-06-04 17:26:18,931 | INFO     | -- intersect: -19466738978.88689
[2025-06-04 19:27:37] 2025-06-04 17:26:18,931 | INFO     | intersect: -19466738978.88689
[2025-06-04 19:27:37] 2025-06-04 17:26:18,931 | INFO     | chi2: 2.43120269335607
[2025-06-04 19:27:37] 2025-06-04 17:26:18,931 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | sum of deviations: 33416184818.500008
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | mean x: 1749052117.5
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | mean y: 2302235.4340659343
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | -- intersect: -31264260373.642178
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | intersect: -31264260373.642178
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | chi2: 1.624336019546434
[2025-06-04 19:27:37] 2025-06-04 17:26:18,933 | INFO     | current chi2=1.624336019546434 (change=33.187963965926045 %)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,934 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | sum of deviations: 32240566557.999992
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | mean x: 1749051965.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | mean y: 2301038.9943502825
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | -- intersect: -32793709496.11379
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | intersect: -32793709496.11379
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | chi2: 1.6253420833718715
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | current chi2=1.6253420833718715 (change=-0.06193692766342564 %)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,935 | INFO     | right removable region: 176
[2025-06-04 19:27:37] 2025-06-04 17:26:18,936 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | sum of deviations: -6922440155.499999
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | mean x: 1749052422.5
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | mean y: 2320132.554945055
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | -- intersect: 6479449327.528126
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | intersect: 6479449327.528126
[2025-06-04 19:27:37] 2025-06-04 17:26:18,937 | INFO     | chi2: 0.8377203115623469
[2025-06-04 19:27:37] 2025-06-04 17:26:18,938 | INFO     | current chi2=0.8377203115623469 (change=65.54296711452122 %)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,938 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,939 | INFO     | sum of deviations: -7765358255.000001
[2025-06-04 19:27:37] 2025-06-04 17:26:18,939 | INFO     | mean x: 1749052575.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,939 | INFO     | mean y: 2320969.672316384
[2025-06-04 19:27:37] 2025-06-04 17:26:18,939 | INFO     | -- intersect: 7901464413.7395
[2025-06-04 19:27:37] 2025-06-04 17:26:18,939 | INFO     | intersect: 7901464413.7395
[2025-06-04 19:27:37] 2025-06-04 17:26:18,940 | INFO     | chi2: 0.83416836045451
[2025-06-04 19:27:37] 2025-06-04 17:26:18,940 | INFO     | current chi2=0.83416836045451 (change=0.4240020277427105 %)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,940 | INFO     | left removable region: 20
[2025-06-04 19:27:37] 2025-06-04 17:26:18,940 | INFO     | sum of square deviations: 1177156955.0
[2025-06-04 19:27:37] 2025-06-04 17:26:18,941 | INFO     | sum of deviations: 3449581933.499999
[2025-06-04 19:27:37] 2025-06-04 17:26:18,941 | INFO     | mean x: 1749052544.5
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | mean y: 2331476.6474358975
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | -- intersect: -5123153304.8186035
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | intersect: -5123153304.8186035
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | chi2: 0.0008663402145457698
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | -- intersect: -5123153304.8186035
[2025-06-04 19:27:37] 2025-06-04 17:26:18,942 | INFO     | current memory leak: 2.93 B/s (using 156 data points, chi2=0.00)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,943 | INFO     | sufficient remaining disk space (3239419314176 B)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,943 | INFO     | ..............................
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . Timing measurements:
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . get job = 0 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . initial setup = 1 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . payload setup = 9 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . stage-in = 0 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . payload execution = 11376 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . stage-out = 1 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | . log creation = 0 s
[2025-06-04 19:27:37] 2025-06-04 17:26:18,944 | INFO     | ..............................
[2025-06-04 19:27:37] 2025-06-04 17:26:18,945 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,946 | INFO     | size of work directory /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6668980126: 2864605 B (within 2537553920 B limit)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,946 | INFO     | pfn file=/scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6668980126/HITS.44871837._091312.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,947 | INFO     | total size of present files: 0 B (workdir size: 2864605 B)
[2025-06-04 19:27:37] 2025-06-04 17:26:18,947 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6668980126/HITS.44871837._091312.pool.root.1 since it does not exist
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | 
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | job summary report
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | --------------------------------------------------
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | PanDA job id: 6668980126
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | task id: 44871837
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | errors: (none)
[2025-06-04 19:27:37] 2025-06-04 17:26:19,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | pilot state: finished 
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | transexitcode: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | exeerrorcode: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | exeerrordiag: 
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | exitcode: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | exitmsg: OK
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | cpuconsumptiontime: 43393 s
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | nevents: 400
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | neventsw: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | pid: 2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | pgrp: 2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | corecount: 4
[2025-06-04 19:27:37] 2025-06-04 17:26:19,050 | INFO     | event service: False
[2025-06-04 19:27:37] 2025-06-04 17:26:19,051 | INFO     | sizes: {0: 2396564, 1: 2397432, 7: 2397638, 12: 2397666, 11390: 2427273, 11391: 2436422, 11398: 2436564}
[2025-06-04 19:27:37] 2025-06-04 17:26:19,051 | INFO     | --------------------------------------------------
[2025-06-04 19:27:37] 2025-06-04 17:26:19,051 | INFO     | 
[2025-06-04 19:27:37] 2025-06-04 17:26:19,051 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-04 19:27:37] 2025-06-04 17:26:19,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:27:37] 2025-06-04 17:26:19,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:27:37] 2025-06-04 17:26:19,095 | INFO     | job 6668980126 has completed (purged errors)
[2025-06-04 19:27:37] 2025-06-04 17:26:19,095 | INFO     | overall cleanup function is called
[2025-06-04 19:27:37] 2025-06-04 17:26:19,708 | INFO     | number of running child processes to parent process 2992063: 1
[2025-06-04 19:27:37] 2025-06-04 17:26:19,708 | INFO     | maximum number of monitored processes: 6
[2025-06-04 19:27:37] 2025-06-04 17:26:19,709 | INFO     | aborting job monitoring since job object (job id=6668980126) has expired
[2025-06-04 19:27:37] 2025-06-04 17:26:20,106 | INFO     | --- collectZombieJob: --- 10, [2992063]
[2025-06-04 19:27:37] 2025-06-04 17:26:20,107 | INFO     | zombie collector waiting for pid 2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:20,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:27:37] 2025-06-04 17:26:20,108 | INFO     | collected zombie processes
[2025-06-04 19:27:37] 2025-06-04 17:26:20,108 | INFO     | will attempt to kill all subprocesses of pid=2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:20,798 | INFO     | process IDs to be killed: [2992063] (in reverse order)
[2025-06-04 19:27:37] 2025-06-04 17:26:21,035 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:27:37] 2025-06-04 17:26:21,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:27:37] 2025-06-04 17:26:21,064 | INFO     | did not find any defunct processes belonging to 2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:21,086 | INFO     | did not find any defunct processes belonging to 2992063
[2025-06-04 19:27:37] 2025-06-04 17:26:21,086 | INFO     | ready for new job
[2025-06-04 19:27:37] 2025-06-04 17:26:21,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:27:37] 2025-06-04 17:26:21,090 | INFO     | **************************************
[2025-06-04 19:27:37] 2025-06-04 17:26:21,090 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:27:37] 2025-06-04 17:26:21,090 | INFO     | **************************************
[2025-06-04 19:27:37] 2025-06-04 17:26:21,090 | INFO     | 
[2025-06-04 19:27:37] 2025-06-04 17:26:21,098 | INFO     | architecture information:
[2025-06-04 19:27:37] 2025-06-04 17:26:21,099 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:27:37] 2025-06-04 17:26:21,120 | INFO     | cat /etc/os-release:
[2025-06-04 19:27:37] NAME="CentOS Linux"
[2025-06-04 19:27:37] VERSION="7 (Core)"
[2025-06-04 19:27:37] ID="centos"
[2025-06-04 19:27:37] ID_LIKE="rhel fedora"
[2025-06-04 19:27:37] VERSION_ID="7"
[2025-06-04 19:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:27:37] ANSI_COLOR="0;31"
[2025-06-04 19:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:27:37] HOME_URL="https://www.centos.org/"
[2025-06-04 19:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:27:37] 
[2025-06-04 19:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:27:37] 
[2025-06-04 19:27:37] 2025-06-04 17:26:21,120 | INFO     | **************************************
[2025-06-04 19:27:37] 2025-06-04 17:26:21,623 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-04 19:27:37] 2025-06-04 17:26:21,647 | INFO     | sufficient remaining disk space (3239422459904 B)
[2025-06-04 19:27:37] 2025-06-04 17:26:21,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:27:37] 2025-06-04 17:26:21,648 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:27:37] 2025-06-04 17:26:21,648 | INFO     | update_server=False
[2025-06-04 19:27:37] 2025-06-04 17:26:21,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:27:37] 2025-06-04 17:26:21,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:27:37] 2025-06-04 17:26:21,649 | INFO     | aborting loop
[2025-06-04 19:27:37] 2025-06-04 17:26:21,921 | INFO     | all data control threads have been joined
[2025-06-04 19:27:37] 2025-06-04 17:26:22,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:27:37] 2025-06-04 17:26:22,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:27:37] 2025-06-04 17:26:22,352 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:27:37] 2025-06-04 17:26:22,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:27:37] 2025-06-04 17:26:22,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:27:37] 2025-06-04 17:26:22,654 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:22,654 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:22,670 | INFO     | all job control threads have been joined
[2025-06-04 19:27:37] 2025-06-04 17:26:22,691 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:22,926 | INFO     | [data] control thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,137 | INFO     | all payload control threads have been joined
[2025-06-04 19:27:37] 2025-06-04 17:26:23,353 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,483 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,529 | INFO     | [job] validate thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,675 | INFO     | [job] control thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,719 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:23,992 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:24,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:27:37] 2025-06-04 17:26:24,090 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:24,142 | INFO     | [payload] control thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:24,154 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:25,065 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:26,190 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:32,186 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:27:37] 2025-06-04 17:26:33,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:27:37] 2025-06-04 17:26:35,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23106880804672)>', '<ExcThread(monitor, started 23106628294400)>']
[2025-06-04 19:27:37] 2025-06-04 17:26:35,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:27:37] 2025-06-04 17:26:35,412 | INFO     | [monitor] control thread has ended
[2025-06-04 19:27:37] 2025-06-04 17:26:40,148 | INFO     | all workflow threads have been joined
[2025-06-04 19:27:37] 2025-06-04 17:26:40,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:27:37] 2025-06-04 17:26:40,148 | INFO     | traces error code: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:40,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:27:37] 2025-06-04 17:26:40,304 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:27:37] 2025-06-04 17:26:40,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:27:37] 2025-06-04 17:26:40,311 [wrapper] pilotpid: 2983373
[2025-06-04 19:27:37] 2025-06-04 17:26:40,315 [wrapper] Pilot exit status: 0
[2025-06-04 19:27:37] 2025-06-04 17:26:40,329 [wrapper] pandaids: 6668980126
[2025-06-04 19:27:37] 2025-06-04 17:26:40,478 [wrapper] cleanup supervisor_pilot 3526033 2983374
[2025-06-04 19:27:37] 2025-06-04 17:26:40,482 [wrapper] Test setup, not cleaning
[2025-06-04 19:27:37] 2025-06-04 17:26:40,486 [wrapper] apfmon messages muted
[2025-06-04 19:27:37] 2025-06-04 17:26:40,489 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:27:37] 2025-06-04 17:26:40,492 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:27:37]  *** Error codes and diagnostics ***
[2025-06-04 19:27:37]     "exeErrorCode": 0,
[2025-06-04 19:27:37]     "exeErrorDiag": "",
[2025-06-04 19:27:37]     "pilotErrorCode": 0,
[2025-06-04 19:27:37]     "pilotErrorDiag": "",
[2025-06-04 19:27:37]  *** Listing of results directory ***
[2025-06-04 19:27:37] total 421884
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc    495897 May 29 00:21 pilot3.tar.gz
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc      5111 May 29 00:24 queuedata.json
[2025-06-04 19:27:37] -rwx------ 1 boinc boinc     37140 May 29 00:24 runpilot2-wrapper.sh
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:27:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:23 run_atlas
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:23 job.xml
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc 224009780 Jun  4 16:15 EVNT.44871834._003551.pool.root.1
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc      6687 Jun  4 16:15 init_data.xml
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:15 start_atlas.sh
[2025-06-04 19:27:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:15 shared
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc    508879 Jun  4 16:15 input.tar.gz
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:15 boinc_lockfile
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc      2559 Jun  4 16:15 pandaJob.out
[2025-06-04 19:27:37] -rw------- 1 boinc boinc    986819 Jun  4 16:16 agis_schedconf.cvmfs.json
[2025-06-04 19:27:37] drwx------ 4 boinc boinc      4096 Jun  4 16:16 pilot3
[2025-06-04 19:27:37] -rw------- 1 boinc boinc 201403906 Jun  4 19:25 HITS.44871837._091312.pool.root.1
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc       530 Jun  4 19:25 boinc_task_state.xml
[2025-06-04 19:27:37] -rw------- 1 boinc boinc        95 Jun  4 19:25 pilot_heartbeat.json
[2025-06-04 19:27:37] -rw------- 1 boinc boinc      1031 Jun  4 19:26 memory_monitor_summary.json
[2025-06-04 19:27:37] -rw------- 1 boinc boinc   1598969 Jun  4 19:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:27:37] -rw------- 1 boinc boinc    316271 Jun  4 19:26 log.44871837._091312.job.log.tgz.1
[2025-06-04 19:27:37] -rw------- 1 boinc boinc      7702 Jun  4 19:26 heartbeat.json
[2025-06-04 19:27:37] -rw------- 1 boinc boinc      4437 Jun  4 19:26 pilotlog.txt
[2025-06-04 19:27:37] -rw------- 1 boinc boinc   1064582 Jun  4 19:26 log.44871837._091312.job.log.1
[2025-06-04 19:27:37] -rw------- 1 boinc boinc       357 Jun  4 19:26 output.list
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:26 runtime_log
[2025-06-04 19:27:37] -rw------- 1 boinc boinc   1402880 Jun  4 19:26 result.tar.gz
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc      9041 Jun  4 19:26 runtime_log.err
[2025-06-04 19:27:37] -rw------- 1 boinc boinc       664 Jun  4 19:26 DpKNDmINee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRDdKDmdy1Yfn.diag
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc        27 Jun  4 19:27 wrapper_checkpoint.txt
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:27 boinc_mmap_file
[2025-06-04 19:27:37] -rw-r--r-- 1 boinc boinc     20978 Jun  4 19:27 stderr.txt
[2025-06-04 19:27:37] HITS file was successfully produced:
[2025-06-04 19:27:37] -rw------- 1 boinc boinc 201403906 Jun  4 19:25 shared/HITS.pool.root.1
[2025-06-04 19:27:37]  *** Contents of shared directory: ***
[2025-06-04 19:27:37] total 417340
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc 224009780 Jun  4 16:15 ATLAS.root_0
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:15 start_atlas.sh
[2025-06-04 19:27:37] -rw-r--r-- 2 boinc boinc    508879 Jun  4 16:15 input.tar.gz
[2025-06-04 19:27:37] -rw------- 1 boinc boinc 201403906 Jun  4 19:25 HITS.pool.root.1
[2025-06-04 19:27:37] -rw------- 1 boinc boinc   1402880 Jun  4 19:26 result.tar.gz
19:27:38 (2979402): run_atlas exited; CPU time 44082.565233
19:27:38 (2979402): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN