Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:34 (2317683): wrapper (7.7.26015): starting
12:43:34 (2317683): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:43:34] Arguments: --nthreads 4
[2025-06-04 12:43:34] Threads: 4
[2025-06-04 12:43:34] Checking for CVMFS
[2025-06-04 12:43:34] No cvmfs_config command found, will try listing directly
[2025-06-04 12:43:34] CVMFS is ok
[2025-06-04 12:43:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:43:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:43:34] Further information can be found at the LHC@home message board.
[2025-06-04 12:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:43:34] Checking for apptainer binary...
[2025-06-04 12:43:34] which: no apptainer in ((null))
[2025-06-04 12:43:34] apptainer is not installed, using version from CVMFS
[2025-06-04 12:43:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:43:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-04 12:43:34] apptainer works
[2025-06-04 12:43:34] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:43:34] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:43:34] Starting ATLAS job with PandaID=6668788487
[2025-06-04 12:43:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:06:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:06:21] 2025-06-04 14:04:35,582 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:06:21] 2025-06-04 14:04:35,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:06:21] 2025-06-04 14:04:35,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:06:21] 2025-06-04 14:04:35,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:06:21] 2025-06-04 14:04:35,587 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:06:21] 2025-06-04 14:04:35,587 | INFO     | sum of square deviations: 2370641658.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,588 | INFO     | sum of deviations: 34870363299.99999
[2025-06-04 16:06:21] 2025-06-04 14:04:35,588 | INFO     | mean x: 1749039840.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,588 | INFO     | mean y: 2301808.152284264
[2025-06-04 16:06:21] 2025-06-04 14:04:35,588 | INFO     | -- intersect: -25724764296.991585
[2025-06-04 16:06:21] 2025-06-04 14:04:35,588 | INFO     | intersect: -25724764296.991585
[2025-06-04 16:06:21] 2025-06-04 14:04:35,589 | INFO     | chi2: 1.6231542778883044
[2025-06-04 16:06:21] 2025-06-04 14:04:35,589 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,590 | INFO     | sum of deviations: 33830429108.499996
[2025-06-04 16:06:21] 2025-06-04 14:04:35,590 | INFO     | mean x: 1749039687.5
[2025-06-04 16:06:21] 2025-06-04 14:04:35,590 | INFO     | mean y: 2300906.4739583335
[2025-06-04 16:06:21] 2025-06-04 14:04:35,590 | INFO     | -- intersect: -26958751569.19735
[2025-06-04 16:06:21] 2025-06-04 14:04:35,591 | INFO     | intersect: -26958751569.19735
[2025-06-04 16:06:21] 2025-06-04 14:04:35,591 | INFO     | chi2: 1.6240037060130552
[2025-06-04 16:06:21] 2025-06-04 14:04:35,591 | INFO     | current chi2=1.6240037060130552 (change=-0.05233194011945389 %)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,591 | INFO     | right removable region: 191
[2025-06-04 16:06:21] 2025-06-04 14:04:35,591 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,592 | INFO     | sum of deviations: 3614283153.5
[2025-06-04 16:06:21] 2025-06-04 14:04:35,592 | INFO     | mean x: 1749039992.5
[2025-06-04 16:06:21] 2025-06-04 14:04:35,592 | INFO     | mean y: 2328618.1822916665
[2025-06-04 16:06:21] 2025-06-04 14:04:35,593 | INFO     | -- intersect: -2878063304.8258553
[2025-06-04 16:06:21] 2025-06-04 14:04:35,593 | INFO     | intersect: -2878063304.8258553
[2025-06-04 16:06:21] 2025-06-04 14:04:35,593 | INFO     | chi2: 0.010884346295068055
[2025-06-04 16:06:21] 2025-06-04 14:04:35,593 | INFO     | current chi2=0.010884346295068055 (change=99.32943242405592 %)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,593 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,594 | INFO     | sum of deviations: 1562035906.0000002
[2025-06-04 16:06:21] 2025-06-04 14:04:35,594 | INFO     | mean x: 1749040145.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | mean y: 2330467.6470588236
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | -- intersect: -1345080153.5231402
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | intersect: -1345080153.5231402
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | chi2: 0.0027300973464148073
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | current chi2=0.0027300973464148073 (change=74.91721346966077 %)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,595 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 16:06:21] 2025-06-04 14:04:35,596 | INFO     | sum of deviations: 1737824089.5000002
[2025-06-04 16:06:21] 2025-06-04 14:04:35,596 | INFO     | mean x: 1749040297.5
[2025-06-04 16:06:21] 2025-06-04 14:04:35,596 | INFO     | mean y: 2330295.895604396
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | -- intersect: -1623690711.4313078
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | intersect: -1623690711.4313078
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | chi2: 0.0025834995637526313
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | current chi2=0.0025834995637526313 (change=5.369690676220383 %)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | left removable region: 30
[2025-06-04 16:06:21] 2025-06-04 14:04:35,597 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,598 | INFO     | sum of deviations: 2831592671.9999995
[2025-06-04 16:06:21] 2025-06-04 14:04:35,598 | INFO     | mean x: 1749040572.0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,598 | INFO     | mean y: 2328624.552795031
[2025-06-04 16:06:21] 2025-06-04 14:04:35,598 | INFO     | -- intersect: -3824961337.153589
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | intersect: -3824961337.153589
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | chi2: 8.061571882848897e-05
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | -- intersect: -3824961337.153589
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | current memory leak: 2.19 B/s (using 161 data points, chi2=0.00)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | ..............................
[2025-06-04 16:06:21] 2025-06-04 14:04:35,599 | INFO     | . Timing measurements:
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . get job = 0 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . initial setup = 1 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . payload setup = 9 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . stage-in = 0 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . payload execution = 12007 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . stage-out = 0 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | . log creation = 0 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,600 | INFO     | ..............................
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | 
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | job summary report
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | --------------------------------------------------
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | PanDA job id: 6668788487
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | task id: 44871837
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | errors: (none)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | pilot state: finished 
[2025-06-04 16:06:21] 2025-06-04 14:04:35,700 | INFO     | transexitcode: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | exeerrorcode: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | exeerrordiag: 
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | exitcode: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | exitmsg: OK
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | cpuconsumptiontime: 45842 s
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | nevents: 400
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | neventsw: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | pid: 2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | pgrp: 2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | corecount: 4
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | event service: False
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | sizes: {0: 2405246, 1: 2405246, 7: 2405480, 11: 2405508, 12020: 2435395, 12022: 2445413, 12024: 2445597, 12030: 2445767}
[2025-06-04 16:06:21] 2025-06-04 14:04:35,701 | INFO     | --------------------------------------------------
[2025-06-04 16:06:21] 2025-06-04 14:04:35,702 | INFO     | 
[2025-06-04 16:06:21] 2025-06-04 14:04:35,702 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-04 16:06:21] 2025-06-04 14:04:35,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:06:21] 2025-06-04 14:04:35,728 | INFO     | job 6668788487 has completed (purged errors)
[2025-06-04 16:06:21] 2025-06-04 14:04:35,728 | INFO     | overall cleanup function is called
[2025-06-04 16:06:21] 2025-06-04 14:04:36,735 | INFO     | --- collectZombieJob: --- 10, [2340067]
[2025-06-04 16:06:21] 2025-06-04 14:04:36,736 | INFO     | zombie collector waiting for pid 2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:36,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:06:21] 2025-06-04 14:04:36,736 | INFO     | collected zombie processes
[2025-06-04 16:06:21] 2025-06-04 14:04:36,736 | INFO     | will attempt to kill all subprocesses of pid=2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:37,425 | INFO     | process IDs to be killed: [2340067] (in reverse order)
[2025-06-04 16:06:21] 2025-06-04 14:04:37,675 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:06:21] 2025-06-04 14:04:37,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:06:21] 2025-06-04 14:04:37,703 | INFO     | did not find any defunct processes belonging to 2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:37,724 | INFO     | did not find any defunct processes belonging to 2340067
[2025-06-04 16:06:21] 2025-06-04 14:04:37,725 | INFO     | ready for new job
[2025-06-04 16:06:21] 2025-06-04 14:04:37,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:06:21] 2025-06-04 14:04:37,727 | INFO     | **************************************
[2025-06-04 16:06:21] 2025-06-04 14:04:37,727 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:06:21] 2025-06-04 14:04:37,727 | INFO     | **************************************
[2025-06-04 16:06:21] 2025-06-04 14:04:37,728 | INFO     | 
[2025-06-04 16:06:21] 2025-06-04 14:04:37,736 | INFO     | architecture information:
[2025-06-04 16:06:21] 2025-06-04 14:04:37,736 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:06:21] 2025-06-04 14:04:37,755 | INFO     | cat /etc/os-release:
[2025-06-04 16:06:21] NAME="CentOS Linux"
[2025-06-04 16:06:21] VERSION="7 (Core)"
[2025-06-04 16:06:21] ID="centos"
[2025-06-04 16:06:21] ID_LIKE="rhel fedora"
[2025-06-04 16:06:21] VERSION_ID="7"
[2025-06-04 16:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:06:21] ANSI_COLOR="0;31"
[2025-06-04 16:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:06:21] HOME_URL="https://www.centos.org/"
[2025-06-04 16:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:06:21] 
[2025-06-04 16:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:06:21] 
[2025-06-04 16:06:21] 2025-06-04 14:04:37,755 | INFO     | **************************************
[2025-06-04 16:06:21] 2025-06-04 14:04:38,258 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-04 16:06:21] 2025-06-04 14:04:38,282 | INFO     | sufficient remaining disk space (3255733059584 B)
[2025-06-04 16:06:21] 2025-06-04 14:04:38,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:06:21] 2025-06-04 14:04:38,282 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:06:21] 2025-06-04 14:04:38,282 | INFO     | update_server=False
[2025-06-04 16:06:21] 2025-06-04 14:04:38,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:06:21] 2025-06-04 14:04:38,283 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:06:21] 2025-06-04 14:04:38,283 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:06:21] 2025-06-04 14:04:38,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:06:21] 2025-06-04 14:04:38,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:06:21] 2025-06-04 14:04:38,446 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:06:21] 2025-06-04 14:04:38,447 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:06:21] 2025-06-04 14:04:38,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:06:21] 2025-06-04 14:04:38,447 | INFO     | will abort loop
[2025-06-04 16:06:21] 2025-06-04 14:04:38,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:06:21] 2025-06-04 14:04:38,815 | INFO     | all job control threads have been joined
[2025-06-04 16:06:21] 2025-06-04 14:04:38,980 | INFO     | all data control threads have been joined
[2025-06-04 16:06:21] 2025-06-04 14:04:39,011 | INFO     | all payload control threads have been joined
[2025-06-04 16:06:21] 2025-06-04 14:04:39,288 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,452 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,727 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,821 | INFO     | [job] control thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,862 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,974 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:39,985 | INFO     | [data] control thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,016 | INFO     | [payload] control thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,048 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:06:21] 2025-06-04 14:04:40,352 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,486 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,531 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,705 | INFO     | [job] validate thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:40,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:06:21] 2025-06-04 14:04:41,715 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:44,185 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:06:21] 2025-06-04 14:04:45,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22569565587264)>', '<ExcThread(monitor, started 22569325393664)>']
[2025-06-04 16:06:21] 2025-06-04 14:04:46,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:06:21] 2025-06-04 14:04:46,323 | INFO     | [monitor] control thread has ended
[2025-06-04 16:06:21] 2025-06-04 14:04:50,542 | INFO     | all workflow threads have been joined
[2025-06-04 16:06:21] 2025-06-04 14:04:50,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:06:21] 2025-06-04 14:04:50,543 | INFO     | traces error code: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:50,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:06:21] 2025-06-04 14:04:50,659 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:06:21] 2025-06-04 14:04:50,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:06:21] 2025-06-04 14:04:50,666 [wrapper] pilotpid: 2324977
[2025-06-04 16:06:21] 2025-06-04 14:04:50,669 [wrapper] Pilot exit status: 0
[2025-06-04 16:06:21] 2025-06-04 14:04:50,682 [wrapper] pandaids: 6668788487
[2025-06-04 16:06:21] 2025-06-04 14:04:50,830 [wrapper] cleanup supervisor_pilot 2856869 2324979
[2025-06-04 16:06:21] 2025-06-04 14:04:50,835 [wrapper] Test setup, not cleaning
[2025-06-04 16:06:21] 2025-06-04 14:04:50,838 [wrapper] apfmon messages muted
[2025-06-04 16:06:21] 2025-06-04 14:04:50,842 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:06:21] 2025-06-04 14:04:50,845 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:06:21]  *** Error codes and diagnostics ***
[2025-06-04 16:06:21]     "exeErrorCode": 0,
[2025-06-04 16:06:21]     "exeErrorDiag": "",
[2025-06-04 16:06:21]     "pilotErrorCode": 0,
[2025-06-04 16:06:21]     "pilotErrorDiag": "",
[2025-06-04 16:06:21]  *** Listing of results directory ***
[2025-06-04 16:06:21] total 416636
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc      5111 May 28 20:37 queuedata.json
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc    495897 May 28 20:37 pilot3.tar.gz
[2025-06-04 16:06:21] -rwx------ 1 boinc boinc     37140 May 28 20:38 runpilot2-wrapper.sh
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:06:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:43 run_atlas
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:43 job.xml
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc      6688 Jun  4 12:43 init_data.xml
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc 222758276 Jun  4 12:43 EVNT.44871834._003454.pool.root.1
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:43 start_atlas.sh
[2025-06-04 16:06:21] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:43 shared
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc    508883 Jun  4 12:43 input.tar.gz
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:43 boinc_lockfile
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc      2559 Jun  4 12:43 pandaJob.out
[2025-06-04 16:06:21] -rw------- 1 boinc boinc    986812 Jun  4 12:43 agis_schedconf.cvmfs.json
[2025-06-04 16:06:21] drwx------ 4 boinc boinc      4096 Jun  4 12:43 pilot3
[2025-06-04 16:06:21] -rw------- 1 boinc boinc        95 Jun  4 16:03 pilot_heartbeat.json
[2025-06-04 16:06:21] -rw------- 1 boinc boinc 197187315 Jun  4 16:03 HITS.44871837._088714.pool.root.1
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc       530 Jun  4 16:04 boinc_task_state.xml
[2025-06-04 16:06:21] -rw------- 1 boinc boinc      1031 Jun  4 16:04 memory_monitor_summary.json
[2025-06-04 16:06:21] -rw------- 1 boinc boinc   1598969 Jun  4 16:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:06:21] -rw------- 1 boinc boinc    308567 Jun  4 16:04 log.44871837._088714.job.log.tgz.1
[2025-06-04 16:06:21] -rw------- 1 boinc boinc      7702 Jun  4 16:04 heartbeat.json
[2025-06-04 16:06:21] -rw------- 1 boinc boinc      4674 Jun  4 16:04 pilotlog.txt
[2025-06-04 16:06:21] -rw------- 1 boinc boinc   1119056 Jun  4 16:04 log.44871837._088714.job.log.1
[2025-06-04 16:06:21] -rw------- 1 boinc boinc       357 Jun  4 16:04 output.list
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:04 runtime_log
[2025-06-04 16:06:21] -rw------- 1 boinc boinc   1443840 Jun  4 16:04 result.tar.gz
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc      9041 Jun  4 16:04 runtime_log.err
[2025-06-04 16:06:21] -rw------- 1 boinc boinc       666 Jun  4 16:04 ZTPMDmGqae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTxTKDmVIyK5m.diag
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:05 wrapper_checkpoint.txt
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:06 boinc_mmap_file
[2025-06-04 16:06:21] -rw-r--r-- 1 boinc boinc     20652 Jun  4 16:06 stderr.txt
[2025-06-04 16:06:21] HITS file was successfully produced:
[2025-06-04 16:06:21] -rw------- 1 boinc boinc 197187315 Jun  4 16:03 shared/HITS.pool.root.1
[2025-06-04 16:06:21]  *** Contents of shared directory: ***
[2025-06-04 16:06:21] total 412044
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc 222758276 Jun  4 12:43 ATLAS.root_0
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:43 start_atlas.sh
[2025-06-04 16:06:21] -rw-r--r-- 2 boinc boinc    508883 Jun  4 12:43 input.tar.gz
[2025-06-04 16:06:21] -rw------- 1 boinc boinc 197187315 Jun  4 16:03 HITS.pool.root.1
[2025-06-04 16:06:21] -rw------- 1 boinc boinc   1443840 Jun  4 16:04 result.tar.gz
16:06:22 (2317683): run_atlas exited; CPU time 46553.674093
16:06:22 (2317683): called boinc_finish(0)

</stderr_txt>
]]>

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