Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:13:06 (36099): wrapper (7.7.26015): starting
21:13:06 (36099): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 21:13:06] Arguments: --nthreads 8
[2025-05-28 21:13:06] Threads: 8
[2025-05-28 21:13:06] Checking for CVMFS
[2025-05-28 21:13:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 21:13:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 21:13:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 21:13:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 21:13:08] 2.11.2.0 20329 83408 223132 146537 0 320 14477117 18432000 9329 130560 0 192282947 98.772 531203305 37752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-28 21:13:08] CVMFS is ok
[2025-05-28 21:13:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 21:13:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 21:13:08] Further information can be found at the LHC@home message board.
[2025-05-28 21:13:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 21:13:08] Checking for apptainer binary...
[2025-05-28 21:13:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 21:13:08] Running /usr/bin/apptainer --version
[2025-05-28 21:13:09] apptainer version 1.3.2-1.el7
[2025-05-28 21:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 21:13:15] c-211-9.aglt2.org
[2025-05-28 21:13:15] apptainer works
[2025-05-28 21:13:15] Set ATHENA_PROC_NUMBER=8
[2025-05-28 21:13:15] Set ATHENA_CORE_NUMBER=8
[2025-05-28 21:13:15] Starting ATLAS job with PandaID=6668788819
[2025-05-28 21:13:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:57 (7602): wrapper (7.7.26015): starting
07:12:57 (7602): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 07:12:57] Arguments: --nthreads 8
[2025-05-29 07:12:57] Threads: 8
[2025-05-29 07:12:57] This job has been restarted, cleaning up previous attempt
[2025-05-29 07:12:57] Checking for CVMFS
[2025-05-29 07:12:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:12:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:12:59] 2.11.2.0 20329 84008 225604 146558 1 334 18216085 18432001 9852 130560 0 193201784 98.774 532336583 37739 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-29 07:12:59] CVMFS is ok
[2025-05-29 07:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 07:12:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 07:12:59] Further information can be found at the LHC@home message board.
[2025-05-29 07:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:12:59] Checking for apptainer binary...
[2025-05-29 07:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:12:59] Running /usr/bin/apptainer --version
[2025-05-29 07:12:59] apptainer version 1.3.2-1.el7
[2025-05-29 07:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:13:02] c-211-9.aglt2.org
[2025-05-29 07:13:02] apptainer works
[2025-05-29 07:13:03] Set ATHENA_PROC_NUMBER=8
[2025-05-29 07:13:03] Set ATHENA_CORE_NUMBER=8
[2025-05-29 07:13:03] Starting ATLAS job with PandaID=6668788819
[2025-05-29 07:13:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 16:47:41]  *** The last 200 lines of the pilot log: ***
[2025-05-29 16:47:41] 2025-05-29 20:47:21,410 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668788819/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,430 | INFO     | extracted standard info from prmon json
[2025-05-29 16:47:41] 2025-05-29 20:47:21,430 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 16:47:41] 2025-05-29 20:47:21,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 16:47:41] 2025-05-29 20:47:21,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 16:47:41] 2025-05-29 20:47:21,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 16:47:41] 2025-05-29 20:47:21,540 | INFO     | fitting pss+swap vs Time
[2025-05-29 16:47:41] 2025-05-29 20:47:21,562 | INFO     | sum of square deviations: 54457794692.79307
[2025-05-29 16:47:41] 2025-05-29 20:47:21,607 | INFO     | sum of deviations: 264081399144.17847
[2025-05-29 16:47:41] 2025-05-29 20:47:21,607 | INFO     | mean x: 1748534495.0464287
[2025-05-29 16:47:41] 2025-05-29 20:47:21,607 | INFO     | mean y: 2453119.339285714
[2025-05-29 16:47:41] 2025-05-29 20:47:21,607 | INFO     | -- intersect: -8476690013.587268
[2025-05-29 16:47:41] 2025-05-29 20:47:21,607 | INFO     | intersect: -8476690013.587268
[2025-05-29 16:47:41] 2025-05-29 20:47:21,608 | INFO     | chi2: 5.909089174220065
[2025-05-29 16:47:41] 2025-05-29 20:47:21,609 | INFO     | sum of square deviations: 53012174477.48457
[2025-05-29 16:47:41] 2025-05-29 20:47:21,629 | INFO     | sum of deviations: 335279980416.44336
[2025-05-29 16:47:41] 2025-05-29 20:47:21,629 | INFO     | mean x: 1748534342.5477479
[2025-05-29 16:47:41] 2025-05-29 20:47:21,629 | INFO     | mean y: 2460587.7945945947
[2025-05-29 16:47:41] 2025-05-29 20:47:21,630 | INFO     | -- intersect: -11056292725.104881
[2025-05-29 16:47:41] 2025-05-29 20:47:21,630 | INFO     | intersect: -11056292725.104881
[2025-05-29 16:47:41] 2025-05-29 20:47:21,631 | INFO     | chi2: 4.368293134022292
[2025-05-29 16:47:41] 2025-05-29 20:47:21,631 | INFO     | current chi2=4.368293134022292 (change=26.07501756649561 %)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,636 | INFO     | sum of square deviations: 51592300135.86367
[2025-05-29 16:47:41] 2025-05-29 20:47:21,647 | INFO     | sum of deviations: 331895850687.0001
[2025-05-29 16:47:41] 2025-05-29 20:47:21,652 | INFO     | mean x: 1748534190.0454545
[2025-05-29 16:47:41] 2025-05-29 20:47:21,652 | INFO     | mean y: 2460224.32
[2025-05-29 16:47:41] 2025-05-29 20:47:21,652 | INFO     | -- intersect: -11245947792.616459
[2025-05-29 16:47:41] 2025-05-29 20:47:21,652 | INFO     | intersect: -11245947792.616459
[2025-05-29 16:47:41] 2025-05-29 20:47:21,653 | INFO     | chi2: 4.368377733092877
[2025-05-29 16:47:41] 2025-05-29 20:47:21,653 | INFO     | current chi2=4.368377733092877 (change=-0.0019366619406914092 %)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,653 | INFO     | right removable region: 549
[2025-05-29 16:47:41] 2025-05-29 20:47:21,654 | INFO     | sum of square deviations: 53012055651.286476
[2025-05-29 16:47:41] 2025-05-29 20:47:21,670 | INFO     | sum of deviations: 91271269721.78372
[2025-05-29 16:47:41] 2025-05-29 20:47:21,670 | INFO     | mean x: 1748534647.5513513
[2025-05-29 16:47:41] 2025-05-29 20:47:21,670 | INFO     | mean y: 2471334.2882882883
[2025-05-29 16:47:41] 2025-05-29 20:47:21,670 | INFO     | -- intersect: -3007994407.3975945
[2025-05-29 16:47:41] 2025-05-29 20:47:21,670 | INFO     | intersect: -3007994407.3975945
[2025-05-29 16:47:41] 2025-05-29 20:47:21,671 | INFO     | chi2: 2.3594113927109017
[2025-05-29 16:47:41] 2025-05-29 20:47:21,671 | INFO     | current chi2=2.3594113927109017 (change=60.071487785216604 %)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,676 | INFO     | sum of square deviations: 51592165024.36335
[2025-05-29 16:47:41] 2025-05-29 20:47:21,688 | INFO     | sum of deviations: 21358312754.96373
[2025-05-29 16:47:41] 2025-05-29 20:47:21,693 | INFO     | mean x: 1748534800.0545454
[2025-05-29 16:47:41] 2025-05-29 20:47:21,693 | INFO     | mean y: 2478833.3345454545
[2025-05-29 16:47:41] 2025-05-29 20:47:21,693 | INFO     | -- intersect: -721385984.2180263
[2025-05-29 16:47:41] 2025-05-29 20:47:21,693 | INFO     | intersect: -721385984.2180263
[2025-05-29 16:47:41] 2025-05-29 20:47:21,694 | INFO     | chi2: 1.771673317547855
[2025-05-29 16:47:41] 2025-05-29 20:47:21,694 | INFO     | current chi2=1.771673317547855 (change=24.910368619003368 %)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,694 | INFO     | left removable region: 20
[2025-05-29 16:47:41] 2025-05-29 20:47:21,696 | INFO     | sum of square deviations: 45905439618.605
[2025-05-29 16:47:41] 2025-05-29 20:47:21,710 | INFO     | sum of deviations: 37768096646.91309
[2025-05-29 16:47:41] 2025-05-29 20:47:21,711 | INFO     | mean x: 1748534769.5557656
[2025-05-29 16:47:41] 2025-05-29 20:47:21,711 | INFO     | mean y: 2492741.782608696
[2025-05-29 16:47:41] 2025-05-29 20:47:21,711 | INFO     | -- intersect: -1436091241.1993387
[2025-05-29 16:47:41] 2025-05-29 20:47:21,711 | INFO     | intersect: -1436091241.1993387
[2025-05-29 16:47:41] 2025-05-29 20:47:21,715 | INFO     | chi2: 0.00564421582968158
[2025-05-29 16:47:41] 2025-05-29 20:47:21,716 | INFO     | -- intersect: -1436091241.1993387
[2025-05-29 16:47:41] 2025-05-29 20:47:21,716 | INFO     | current memory leak: 0.82 B/s (using 529 data points, chi2=0.01)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | ..............................
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . Timing measurements:
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . get job = 0 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . initial setup = 6 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . payload setup = 64 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . stage-in = 0 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . payload execution = 34182 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . stage-out = 9 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,717 | INFO     | . log creation = 2 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,718 | INFO     | ..............................
[2025-05-29 16:47:41] 2025-05-29 20:47:21,937 | INFO     | 
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | job summary report
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | --------------------------------------------------
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | PanDA job id: 6668788819
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | task id: 44871837
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | errors: (none)
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | pilot state: finished 
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | transexitcode: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:21,938 | INFO     | exeerrorcode: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | exeerrordiag: 
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | exitcode: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | exitmsg: OK
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | cpuconsumptiontime: 74383 s
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | nevents: 400
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | neventsw: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | pid: 41558
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | pgrp: 41558
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | corecount: 8
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | event service: False
[2025-05-29 16:47:41] 2025-05-29 20:47:21,939 | INFO     | sizes: {0: 2405062, 1: 2405261, 12: 2405261, 23: 2405289, 33: 2405523, 34: 2405579, 34251: 2444856, 34252: 2444855, 34263: 2453852, 34267: 2453908, 34330: 2454078}
[2025-05-29 16:47:41] 2025-05-29 20:47:21,940 | INFO     | --------------------------------------------------
[2025-05-29 16:47:41] 2025-05-29 20:47:21,940 | INFO     | 
[2025-05-29 16:47:41] 2025-05-29 20:47:21,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 16:47:41] 2025-05-29 20:47:22,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,162 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 16:47:41] 2025-05-29 20:47:22,163 | INFO     | job 6668788819 has completed (purged errors)
[2025-05-29 16:47:41] 2025-05-29 20:47:22,163 | INFO     | overall cleanup function is called
[2025-05-29 16:47:41] 2025-05-29 20:47:23,196 | INFO     | --- collectZombieJob: --- 10, [41558]
[2025-05-29 16:47:41] 2025-05-29 20:47:23,196 | INFO     | zombie collector waiting for pid 41558
[2025-05-29 16:47:41] 2025-05-29 20:47:23,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 16:47:41] 2025-05-29 20:47:23,196 | INFO     | collected zombie processes
[2025-05-29 16:47:41] 2025-05-29 20:47:23,196 | INFO     | will attempt to kill all subprocesses of pid=41558
[2025-05-29 16:47:41] 2025-05-29 20:47:25,261 | INFO     | process IDs to be killed: [41558] (in reverse order)
[2025-05-29 16:47:41] 2025-05-29 20:47:26,245 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 16:47:41] 2025-05-29 20:47:26,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 16:47:41] 2025-05-29 20:47:26,257 | INFO     | did not find any defunct processes belonging to 41558
[2025-05-29 16:47:41] 2025-05-29 20:47:26,264 | INFO     | did not find any defunct processes belonging to 41558
[2025-05-29 16:47:41] 2025-05-29 20:47:26,264 | INFO     | ready for new job
[2025-05-29 16:47:41] 2025-05-29 20:47:26,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 16:47:41] 2025-05-29 20:47:26,287 | INFO     | **************************************
[2025-05-29 16:47:41] 2025-05-29 20:47:26,287 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 16:47:41] 2025-05-29 20:47:26,288 | INFO     | **************************************
[2025-05-29 16:47:41] 2025-05-29 20:47:26,288 | INFO     | 
[2025-05-29 16:47:41] 2025-05-29 20:47:26,290 | INFO     | architecture information:
[2025-05-29 16:47:41] 2025-05-29 20:47:26,292 | INFO     | executing command: cat /etc/os-release
[2025-05-29 16:47:41] 2025-05-29 20:47:26,315 | INFO     | cat /etc/os-release:
[2025-05-29 16:47:41] NAME="CentOS Linux"
[2025-05-29 16:47:41] VERSION="7 (Core)"
[2025-05-29 16:47:41] ID="centos"
[2025-05-29 16:47:41] ID_LIKE="rhel fedora"
[2025-05-29 16:47:41] VERSION_ID="7"
[2025-05-29 16:47:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 16:47:41] ANSI_COLOR="0;31"
[2025-05-29 16:47:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 16:47:41] HOME_URL="https://www.centos.org/"
[2025-05-29 16:47:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 16:47:41] 
[2025-05-29 16:47:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 16:47:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 16:47:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 16:47:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 16:47:41] 
[2025-05-29 16:47:41] 2025-05-29 20:47:26,316 | INFO     | **************************************
[2025-05-29 16:47:41] 2025-05-29 20:47:26,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 16:47:41] 2025-05-29 20:47:26,944 | INFO     | sufficient remaining disk space (56269733888 B)
[2025-05-29 16:47:41] 2025-05-29 20:47:26,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 16:47:41] 2025-05-29 20:47:26,945 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 16:47:41] 2025-05-29 20:47:26,945 | INFO     | update_server=False
[2025-05-29 16:47:41] 2025-05-29 20:47:26,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 16:47:41] 2025-05-29 20:47:26,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 16:47:41] 2025-05-29 20:47:26,946 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 16:47:41] 2025-05-29 20:47:26,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 16:47:41] 2025-05-29 20:47:26,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 16:47:41] 2025-05-29 20:47:26,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:47:41] 2025-05-29 20:47:26,947 | INFO     | aborting loop
[2025-05-29 16:47:41] 2025-05-29 20:47:26,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:47:41] 2025-05-29 20:47:27,049 | INFO     | all data control threads have been joined
[2025-05-29 16:47:41] 2025-05-29 20:47:27,128 | INFO     | all job control threads have been joined
[2025-05-29 16:47:41] 2025-05-29 20:47:27,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 16:47:41] 2025-05-29 20:47:27,940 | INFO     | all payload control threads have been joined
[2025-05-29 16:47:41] 2025-05-29 20:47:27,952 | INFO     | [job] retrieve thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:27,960 | INFO     | [job] job monitor thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,017 | INFO     | [job] queue monitor thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,056 | INFO     | [data] control thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,135 | INFO     | [job] control thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 16:47:41] 2025-05-29 20:47:28,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,564 | INFO     | [data] copytool_in thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,572 | INFO     | [job] validate thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,581 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,588 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,595 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,836 | INFO     | [payload] validate_post thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:28,946 | INFO     | [payload] control thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:29,234 | INFO     | [payload] failed_post thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:30,377 | INFO     | [data] copytool_out thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:31,725 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 16:47:41] 2025-05-29 20:47:32,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075815663424)>', '<ExcThread(monitor, started 140075232904960)>']
[2025-05-29 16:47:41] 2025-05-29 20:47:32,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 16:47:41] 2025-05-29 20:47:32,990 | INFO     | [monitor] control thread has ended
[2025-05-29 16:47:41] 2025-05-29 20:47:37,496 | INFO     | all workflow threads have been joined
[2025-05-29 16:47:41] 2025-05-29 20:47:37,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 16:47:41] 2025-05-29 20:47:37,497 | INFO     | traces error code: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:37,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 16:47:41] 2025-05-29 20:47:38,688 [wrapper] ==== pilot stdout END ====
[2025-05-29 16:47:41] 2025-05-29 20:47:38,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 16:47:41] 2025-05-29 20:47:38,771 [wrapper] pilotpid: 18656
[2025-05-29 16:47:41] 2025-05-29 20:47:38,818 [wrapper] Pilot exit status: 0
[2025-05-29 16:47:41] 2025-05-29 20:47:39,086 [wrapper] pandaids: 6668788819 6668788819
[2025-05-29 16:47:41] 2025-05-29 20:47:39,775 [wrapper] cleanup supervisor_pilot 29716 18657
[2025-05-29 16:47:41] 2025-05-29 20:47:39,787 [wrapper] Test setup, not cleaning
[2025-05-29 16:47:41] 2025-05-29 20:47:39,797 [wrapper] apfmon messages muted
[2025-05-29 16:47:41] 2025-05-29 20:47:39,814 [wrapper] ==== wrapper stdout END ====
[2025-05-29 16:47:41] 2025-05-29 20:47:39,859 [wrapper] ==== wrapper stderr END ====
[2025-05-29 16:47:41]  *** Error codes and diagnostics ***
[2025-05-29 16:47:41]     "exeErrorCode": 0,
[2025-05-29 16:47:41]     "exeErrorDiag": "",
[2025-05-29 16:47:41]     "pilotErrorCode": 0,
[2025-05-29 16:47:41]     "pilotErrorDiag": "",
[2025-05-29 16:47:41]  *** Listing of results directory ***
[2025-05-29 16:47:41] total 634196
[2025-05-29 16:47:41] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas    495897 May 28 14:37 pilot3.tar.gz
[2025-05-29 16:47:41] -rwx------ 1 boincer umatlas     37140 May 28 14:51 runpilot2-wrapper.sh
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas      5111 May 28 14:51 queuedata.json
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas       100 May 28 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 16:47:41] -rwxr-xr-x 1 boincer umatlas      7986 May 28 21:13 run_atlas
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas       105 May 28 21:13 job.xml
[2025-05-29 16:47:41] -rw-r--r-- 3 boincer umatlas 221596811 May 28 21:13 EVNT.44871834._003463.pool.root.1
[2025-05-29 16:47:41] -rw-r--r-- 3 boincer umatlas 221596811 May 28 21:13 ATLAS.root_0
[2025-05-29 16:47:41] -rw-r--r-- 2 boincer umatlas     15093 May 28 21:13 start_atlas.sh
[2025-05-29 16:47:41] drwxrwx--x 2 boincer umatlas      4096 May 28 21:13 shared
[2025-05-29 16:47:41] -rw-r--r-- 2 boincer umatlas    508872 May 28 21:13 input.tar.gz
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas         0 May 28 21:13 boinc_lockfile
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas      2558 May 29 07:13 pandaJob.out
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas    993012 May 29 07:13 agis_schedconf.cvmfs.json
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas 195724724 May 29 16:43 HITS.44871837._088945.pool.root.1
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas       532 May 29 16:44 boinc_task_state.xml
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas      1061 May 29 16:45 memory_monitor_summary.json
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas   1603667 May 29 16:46 agis_ddmendpoints.agis.ALL.json
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas    566682 May 29 16:46 log.44871837._088945.job.log.tgz.1
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas      6132 May 29 16:46 init_data.xml
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas      8192 May 29 16:47 boinc_mmap_file
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas        29 May 29 16:47 wrapper_checkpoint.txt
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas      7755 May 29 16:47 heartbeat.json
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas        96 May 29 16:47 pilot_heartbeat.json
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas      4476 May 29 16:47 pilotlog.txt
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas   2758197 May 29 16:47 log.44871837._088945.job.log.1
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas       357 May 29 16:47 output.list
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas       620 May 29 16:47 runtime_log
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas   3348480 May 29 16:47 result.tar.gz
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas       788 May 29 16:47 w8KLDmU3ae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlzTKDmqwFVrn.diag
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas      8740 May 29 16:47 runtime_log.err
[2025-05-29 16:47:41] -rw-r--r-- 1 boincer umatlas     23120 May 29 16:47 stderr.txt
[2025-05-29 16:47:41] HITS file was successfully produced:
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas 195724724 May 29 16:43 shared/HITS.pool.root.1
[2025-05-29 16:47:41]  *** Contents of shared directory: ***
[2025-05-29 16:47:41] total 411336
[2025-05-29 16:47:41] -rw-r--r-- 3 boincer umatlas 221596811 May 28 21:13 ATLAS.root_0
[2025-05-29 16:47:41] -rw-r--r-- 2 boincer umatlas     15093 May 28 21:13 start_atlas.sh
[2025-05-29 16:47:41] -rw-r--r-- 2 boincer umatlas    508872 May 28 21:13 input.tar.gz
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas 195724724 May 29 16:43 HITS.pool.root.1
[2025-05-29 16:47:41] -rw------- 1 boincer umatlas   3348480 May 29 16:47 result.tar.gz
16:47:43 (7602): run_atlas exited; CPU time 75223.524377
16:47:43 (7602): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN