Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:11:17 (3421983): wrapper (7.7.26015): starting
23:11:17 (3421983): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 23:11:17] Arguments: --nthreads 9
[2025-05-28 23:11:17] Threads: 9
[2025-05-28 23:11:17] Checking for CVMFS
[2025-05-28 23:11:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 23:11:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 23:11:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 23:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 23:11:20] 2.12.6.0 34032 22242 328012 146540 1 770 28717515 29414400 15320 16776704 0 63262617 99.456 88460270 32401 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 23:11:20] CVMFS is ok
[2025-05-28 23:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 23:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 23:11:20] Further information can be found at the LHC@home message board.
[2025-05-28 23:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 23:11:20] Checking for apptainer binary...
[2025-05-28 23:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 23:11:20] Running /usr/bin/apptainer --version
[2025-05-28 23:11:20] apptainer version 1.4.1-1.el9
[2025-05-28 23:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 23:11:21] c6-5-37-4.aglt2.org
[2025-05-28 23:11:21] apptainer works
[2025-05-28 23:11:22] Set ATHENA_PROC_NUMBER=9
[2025-05-28 23:11:22] Set ATHENA_CORE_NUMBER=9
[2025-05-28 23:11:22] Starting ATLAS job with PandaID=6668947051
[2025-05-28 23:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 04:19:15]  *** The last 200 lines of the pilot log: ***
[2025-05-29 04:19:15] 2025-05-29 08:19:02,161 | INFO     | extracted standard info from prmon json
[2025-05-29 04:19:15] 2025-05-29 08:19:02,161 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 04:19:15] 2025-05-29 08:19:02,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 04:19:15] 2025-05-29 08:19:02,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 04:19:15] 2025-05-29 08:19:02,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 04:19:15] 2025-05-29 08:19:02,167 | INFO     | fitting pss+swap vs Time
[2025-05-29 04:19:15] 2025-05-29 08:19:02,167 | INFO     | sum of square deviations: 8288826817.478232
[2025-05-29 04:19:15] 2025-05-29 08:19:02,169 | INFO     | sum of deviations: 76047132358.86958
[2025-05-29 04:19:15] 2025-05-29 08:19:02,170 | INFO     | mean x: 1748497633.5652175
[2025-05-29 04:19:15] 2025-05-29 08:19:02,170 | INFO     | mean y: 2173737.852842809
[2025-05-29 04:19:15] 2025-05-29 08:19:02,170 | INFO     | -- intersect: -16039690074.348047
[2025-05-29 04:19:15] 2025-05-29 08:19:02,170 | INFO     | intersect: -16039690074.348047
[2025-05-29 04:19:15] 2025-05-29 08:19:02,170 | INFO     | chi2: 6.33477718380154
[2025-05-29 04:19:15] 2025-05-29 08:19:02,171 | INFO     | sum of square deviations: 7879968368.353746
[2025-05-29 04:19:15] 2025-05-29 08:19:02,172 | INFO     | sum of deviations: 96900326723.08844
[2025-05-29 04:19:15] 2025-05-29 08:19:02,172 | INFO     | mean x: 1748497481.0748298
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | mean y: 2181450.268707483
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | -- intersect: -21499171000.72404
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | intersect: -21499171000.72404
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | chi2: 5.600395307996524
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | current chi2=5.600395307996524 (change=11.592860403723131 %)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | right removable region: 293
[2025-05-29 04:19:15] 2025-05-29 08:19:02,173 | INFO     | sum of square deviations: 7879865278.353743
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | sum of deviations: -1377348813.1632328
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | mean x: 1748497786.0748298
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | mean y: 2202555.7346938774
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | -- intersect: 307828510.67130494
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | intersect: 307828510.67130494
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | chi2: 2.858370844177422
[2025-05-29 04:19:15] 2025-05-29 08:19:02,176 | INFO     | current chi2=2.858370844177422 (change=54.878115500471395 %)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,177 | INFO     | sum of square deviations: 7484578414.173036
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | sum of deviations: -41961469733.52251
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | mean x: 1748497938.584775
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | mean y: 2218180.6539792386
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | -- intersect: 9804980509.941174
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | intersect: 9804980509.941174
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | chi2: 1.8799927835132721
[2025-05-29 04:19:15] 2025-05-29 08:19:02,179 | INFO     | current chi2=1.8799927835132721 (change=34.228520860305174 %)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,180 | INFO     | sum of square deviations: 7102769164.799315
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | sum of deviations: -67360740241.76409
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | mean x: 1748498091.0880282
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | mean y: 2228316.51056338
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | -- intersect: 16584510943.786238
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | intersect: 16584510943.786238
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | chi2: 1.4658974887540732
[2025-05-29 04:19:15] 2025-05-29 08:19:02,182 | INFO     | current chi2=1.4658974887540732 (change=22.026430015616896 %)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,183 | INFO     | left removable region: 30
[2025-05-29 04:19:15] 2025-05-29 08:19:02,183 | INFO     | sum of square deviations: 5640902069.825096
[2025-05-29 04:19:15] 2025-05-29 08:19:02,184 | INFO     | sum of deviations: -42982105471.84413
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | mean x: 1748498365.5855513
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | mean y: 2236354.3041825094
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | -- intersect: 13325307777.395826
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | intersect: 13325307777.395826
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | chi2: 0.5685590301883102
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | -- intersect: 13325307777.395826
[2025-05-29 04:19:15] 2025-05-29 08:19:02,185 | INFO     | current memory leak: -7.62 B/s (using 263 data points, chi2=0.57)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | ..............................
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | . Timing measurements:
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | . get job = 0 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | . initial setup = 5 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | . payload setup = 57 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,186 | INFO     | . stage-in = 0 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,187 | INFO     | . payload execution = 18215 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,187 | INFO     | . stage-out = 2 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,187 | INFO     | . log creation = 0 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,187 | INFO     | ..............................
[2025-05-29 04:19:15] 2025-05-29 08:19:02,312 | INFO     | 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,312 | INFO     | job summary report
[2025-05-29 04:19:15] 2025-05-29 08:19:02,312 | INFO     | --------------------------------------------------
[2025-05-29 04:19:15] 2025-05-29 08:19:02,312 | INFO     | PanDA job id: 6668947051
[2025-05-29 04:19:15] 2025-05-29 08:19:02,312 | INFO     | task id: 44871837
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | errors: (none)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | pilot state: finished 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | transexitcode: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | exeerrorcode: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | exeerrordiag: 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | exitcode: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | exitmsg: OK
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | cpuconsumptiontime: 49998 s
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | nevents: 400
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | neventsw: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | pid: 3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | pgrp: 3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | corecount: 9
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | event service: False
[2025-05-29 04:19:15] 2025-05-29 08:19:02,313 | INFO     | sizes: {0: 2404406, 1: 2405007, 2: 2405091, 3: 2405318, 4: 2405346, 14: 2405346, 26: 2405502, 38: 2405530, 45: 2405764, 48: 2405792, 18277: 2437791, 18278: 2438070
[2025-05-29 04:19:15] 2025-05-29 08:19:02,314 | INFO     | --------------------------------------------------
[2025-05-29 04:19:15] 2025-05-29 08:19:02,314 | INFO     | 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 04:19:15] 2025-05-29 08:19:02,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | job 6668947051 has completed (purged errors)
[2025-05-29 04:19:15] 2025-05-29 08:19:02,336 | INFO     | overall cleanup function is called
[2025-05-29 04:19:15] 2025-05-29 08:19:02,626 | INFO     | PID=3426209 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-29 04:19:15] 2025-05-29 08:19:02,626 | INFO     | .. there are 24 such processes running
[2025-05-29 04:19:15] 2025-05-29 08:19:03,344 | INFO     | --- collectZombieJob: --- 10, [3436407]
[2025-05-29 04:19:15] 2025-05-29 08:19:03,344 | INFO     | zombie collector waiting for pid 3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:03,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 04:19:15] 2025-05-29 08:19:03,345 | INFO     | collected zombie processes
[2025-05-29 04:19:15] 2025-05-29 08:19:03,345 | INFO     | will attempt to kill all subprocesses of pid=3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:03,667 | INFO     | process IDs to be killed: [3436407] (in reverse order)
[2025-05-29 04:19:15] 2025-05-29 08:19:03,827 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 04:19:15] 2025-05-29 08:19:03,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 04:19:15] 2025-05-29 08:19:03,839 | INFO     | did not find any defunct processes belonging to 3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:03,851 | INFO     | did not find any defunct processes belonging to 3436407
[2025-05-29 04:19:15] 2025-05-29 08:19:03,851 | INFO     | ready for new job
[2025-05-29 04:19:15] 2025-05-29 08:19:03,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 04:19:15] 2025-05-29 08:19:03,854 | INFO     | **************************************
[2025-05-29 04:19:15] 2025-05-29 08:19:03,854 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 04:19:15] 2025-05-29 08:19:03,854 | INFO     | **************************************
[2025-05-29 04:19:15] 2025-05-29 08:19:03,854 | INFO     | 
[2025-05-29 04:19:15] 2025-05-29 08:19:03,858 | INFO     | architecture information:
[2025-05-29 04:19:15] 2025-05-29 08:19:03,858 | INFO     | executing command: cat /etc/os-release
[2025-05-29 04:19:15] 2025-05-29 08:19:03,910 | INFO     | cat /etc/os-release:
[2025-05-29 04:19:15] NAME="CentOS Linux"
[2025-05-29 04:19:15] VERSION="7 (Core)"
[2025-05-29 04:19:15] ID="centos"
[2025-05-29 04:19:15] ID_LIKE="rhel fedora"
[2025-05-29 04:19:15] VERSION_ID="7"
[2025-05-29 04:19:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 04:19:15] ANSI_COLOR="0;31"
[2025-05-29 04:19:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 04:19:15] HOME_URL="https://www.centos.org/"
[2025-05-29 04:19:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 04:19:15] 
[2025-05-29 04:19:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 04:19:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 04:19:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 04:19:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 04:19:15] 
[2025-05-29 04:19:15] 2025-05-29 08:19:03,912 | INFO     | **************************************
[2025-05-29 04:19:15] 2025-05-29 08:19:04,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 04:19:15] 2025-05-29 08:19:04,434 | INFO     | sufficient remaining disk space (74163683328 B)
[2025-05-29 04:19:15] 2025-05-29 08:19:04,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 04:19:15] 2025-05-29 08:19:04,435 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 04:19:15] 2025-05-29 08:19:04,435 | INFO     | update_server=False
[2025-05-29 04:19:15] 2025-05-29 08:19:04,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 04:19:15] 2025-05-29 08:19:04,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 04:19:15] 2025-05-29 08:19:04,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:19:15] 2025-05-29 08:19:04,586 | INFO     | aborting loop
[2025-05-29 04:19:15] 2025-05-29 08:19:04,636 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 04:19:15] 2025-05-29 08:19:04,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 04:19:15] 2025-05-29 08:19:04,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 04:19:15] 2025-05-29 08:19:04,822 | INFO     | all data control threads have been joined
[2025-05-29 04:19:15] 2025-05-29 08:19:05,141 | INFO     | all payload control threads have been joined
[2025-05-29 04:19:15] 2025-05-29 08:19:05,441 | INFO     | [job] retrieve thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,533 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,549 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,594 | INFO     | [job] job monitor thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,633 | INFO     | all job control threads have been joined
[2025-05-29 04:19:15] 2025-05-29 08:19:05,645 | INFO     | [job] validate thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,828 | INFO     | [data] control thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,865 | INFO     | [payload] failed_post thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:05,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 04:19:15] 2025-05-29 08:19:06,014 | INFO     | [data] copytool_in thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,147 | INFO     | [payload] control thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,381 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,460 | INFO     | [payload] validate_post thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,466 | INFO     | [data] copytool_out thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,639 | INFO     | [job] control thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:06,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:07,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:19:15] 2025-05-29 08:19:08,333 | INFO     | [job] queue monitor thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:09,952 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 04:19:15] 2025-05-29 08:19:10,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640829847360)>', '<ExcThread(monitor, started 140640029497088)>']
[2025-05-29 04:19:15] 2025-05-29 08:19:10,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 04:19:15] 2025-05-29 08:19:10,670 | INFO     | [monitor] control thread has ended
[2025-05-29 04:19:15] 2025-05-29 08:19:15,121 | INFO     | all workflow threads have been joined
[2025-05-29 04:19:15] 2025-05-29 08:19:15,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 04:19:15] 2025-05-29 08:19:15,121 | INFO     | traces error code: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:15,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 04:19:15] 2025-05-29 08:19:15,313 [wrapper] ==== pilot stdout END ====
[2025-05-29 04:19:15] 2025-05-29 08:19:15,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 04:19:15] 2025-05-29 08:19:15,339 [wrapper] pilotpid: 3426209
[2025-05-29 04:19:15] 2025-05-29 08:19:15,342 [wrapper] Pilot exit status: 0
[2025-05-29 04:19:15] 2025-05-29 08:19:15,353 [wrapper] pandaids: 6668947051
[2025-05-29 04:19:15] 2025-05-29 08:19:15,411 [wrapper] cleanup supervisor_pilot  411971 3426210
[2025-05-29 04:19:15] 2025-05-29 08:19:15,414 [wrapper] Test setup, not cleaning
[2025-05-29 04:19:15] 2025-05-29 08:19:15,425 [wrapper] apfmon messages muted
[2025-05-29 04:19:15] 2025-05-29 08:19:15,428 [wrapper] ==== wrapper stdout END ====
[2025-05-29 04:19:15] 2025-05-29 08:19:15,430 [wrapper] ==== wrapper stderr END ====
[2025-05-29 04:19:15]  *** Error codes and diagnostics ***
[2025-05-29 04:19:15]     "exeErrorCode": 0,
[2025-05-29 04:19:15]     "exeErrorDiag": "",
[2025-05-29 04:19:15]     "pilotErrorCode": 0,
[2025-05-29 04:19:15]     "pilotErrorDiag": "",
[2025-05-29 04:19:15]  *** Listing of results directory ***
[2025-05-29 04:19:15] total 415884
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas    495897 May 28 17:08 pilot3.tar.gz
[2025-05-29 04:19:15] -rwx------. 1 boincer umatlas     37140 May 28 17:42 runpilot2-wrapper.sh
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas      5111 May 28 17:42 queuedata.json
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas       100 May 28 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 04:19:15] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 23:11 run_atlas
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas       105 May 28 23:11 job.xml
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas 222513213 May 28 23:11 EVNT.44871834._003536.pool.root.1
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 23:11 start_atlas.sh
[2025-05-29 04:19:15] drwxrwx--x. 2 boincer umatlas      4096 May 28 23:11 shared
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas    508878 May 28 23:11 input.tar.gz
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas         0 May 28 23:11 boinc_lockfile
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas      2559 May 28 23:11 pandaJob.out
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas    993415 May 28 23:12 agis_schedconf.cvmfs.json
[2025-05-29 04:19:15] drwx------. 4 boincer umatlas      4096 May 28 23:12 pilot3
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas 195637640 May 29 04:17 HITS.44871837._090893.pool.root.1
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas       531 May 29 04:17 boinc_task_state.xml
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas      6841 May 29 04:18 init_data.xml
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas        95 May 29 04:18 pilot_heartbeat.json
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas      1042 May 29 04:18 memory_monitor_summary.json
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas   1603667 May 29 04:18 agis_ddmendpoints.agis.ALL.json
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas    448414 May 29 04:18 log.44871837._090893.job.log.tgz.1
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas      7741 May 29 04:19 heartbeat.json
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas      8192 May 29 04:19 boinc_mmap_file
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas        28 May 29 04:19 wrapper_checkpoint.txt
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas      4353 May 29 04:19 pilotlog.txt
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas   1486677 May 29 04:19 log.44871837._090893.job.log.1
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas       357 May 29 04:19 output.list
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas       620 May 29 04:19 runtime_log
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas   1955840 May 29 04:19 result.tar.gz
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas      8665 May 29 04:19 runtime_log.err
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas       657 May 29 04:19 OjmNDmdide7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNDUKDmhL6QRn.diag
[2025-05-29 04:19:15] -rw-r--r--. 1 boincer umatlas     21004 May 29 04:19 stderr.txt
[2025-05-29 04:19:15] HITS file was successfully produced:
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas 195637640 May 29 04:17 shared/HITS.pool.root.1
[2025-05-29 04:19:15]  *** Contents of shared directory: ***
[2025-05-29 04:19:15] total 410788
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas 222513213 May 28 23:11 ATLAS.root_0
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 23:11 start_atlas.sh
[2025-05-29 04:19:15] -rw-r--r--. 2 boincer umatlas    508878 May 28 23:11 input.tar.gz
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas 195637640 May 29 04:17 HITS.pool.root.1
[2025-05-29 04:19:15] -rw-------. 1 boincer umatlas   1955840 May 29 04:19 result.tar.gz
04:19:16 (3421983): run_atlas exited; CPU time 50483.320995
04:19:16 (3421983): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN