Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:57:46 (936043): wrapper (7.7.26015): starting
16:57:46 (936043): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 16:57:46] Arguments: --nthreads 12
[2025-05-28 16:57:46] Threads: 12
[2025-05-28 16:57:46] Checking for CVMFS
[2025-05-28 16:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 16:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 16:57:46] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 16:57:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 16:57:46] 2.11.5.0 2659 41503 248096 146536 3 444 26037182 45568001 9143 130560 0 400310442 99.775 289777246 19567 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 16:57:46] CVMFS is ok
[2025-05-28 16:57:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 16:57:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 16:57:46] Further information can be found at the LHC@home message board.
[2025-05-28 16:57:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 16:57:46] Checking for apptainer binary...
[2025-05-28 16:57:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 16:57:46] Running /usr/bin/apptainer --version
[2025-05-28 16:57:46] apptainer version 1.4.0-1.el9
[2025-05-28 16:57:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 16:57:47] wns0028.triumf.lcg
[2025-05-28 16:57:47] apptainer works
[2025-05-28 16:57:47] Set ATHENA_PROC_NUMBER=12
[2025-05-28 16:57:47] Set ATHENA_CORE_NUMBER=12
[2025-05-28 16:57:47] Starting ATLAS job with PandaID=6668863596
[2025-05-28 16:57:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 17:00:46]  *** The last 200 lines of the pilot log: ***
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard info from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | found no stored workdir sizes
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | WARNING  | wrong length of table data, x=[1748476696.0], y=[933.0] (must be same and length>=4)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . Timing measurements:
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . get job = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . initial setup = 2 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload setup = 3 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-in = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload execution = 14 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-out = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . log creation = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668863596/pilotlog.txt
[2025-05-28 17:00:46] 2025-05-29 00:00:32,084 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 17:00:46] - Log from pilotlog.txt -
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard info from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | found no stored workdir sizes
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | WARNING  | wrong length of table data, x=[1748476696.0], y=[933.0] (must be same and length>=4)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . Timing measurements:
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . get job = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . initial setup = 2 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload setup = 3 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-in = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload execution = 14 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-out = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . log creation = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668863596/pilotlog.txt
[2025-05-28 17:00:46] 2025-05-29 00:00:32,084 | WARNING  | 
[2025-05-28 17:00:46] [begin log extracts]
[2025-05-28 17:00:46] - Log from pilotlog.txt -
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard info from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,071 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | WARNING  | found no stored workdir sizes
[2025-05-28 17:00:46] 2025-05-29 00:00:32,072 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | WARNING  | wrong length of table data, x=[1748476696.0], y=[933.0] (must be same and length>=4)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,073 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . Timing measurements:
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . get job = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . initial setup = 2 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload setup = 3 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-in = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . payload execution = 14 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . stage-out = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | . log creation = 0 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | ..............................
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 17:00:46] 2025-05-29 00:00:32,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668863596/pilotlog.txt
[2025-05-28 17:00:46] [end log extracts]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,084 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,086 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 17:00:46] 2025-05-29 00:00:32,612 | INFO     | 
[2025-05-28 17:00:46] 2025-05-29 00:00:32,612 | INFO     | job summary report
[2025-05-28 17:00:46] 2025-05-29 00:00:32,612 | INFO     | --------------------------------------------------
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | PanDA job id: 6668863596
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | task id: 44871837
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 16:58:22,933 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | pilot state: failed 
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | transexitcode: 65
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | exeerrorcode: 65
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | exitcode: 65
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | nevents: 0
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | neventsw: 0
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | pid: 945940
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | pgrp: 945940
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | corecount: 12
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | event service: False
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | sizes: {0: 2405231, 3: 2405437, 11: 2405465, 22: 2428593, 23: 2432828, 25: 2432856, 144: 2433126}
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | --------------------------------------------------
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | 
[2025-05-28 17:00:46] 2025-05-29 00:00:32,613 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 17:00:46] 2025-05-29 00:00:32,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 17:00:46] 2025-05-29 00:00:32,629 | INFO     | job 6668863596 has completed (purged errors)
[2025-05-28 17:00:46] 2025-05-29 00:00:32,629 | INFO     | overall cleanup function is called
[2025-05-28 17:00:46] 2025-05-29 00:00:33,635 | INFO     | --- collectZombieJob: --- 10, [945940]
[2025-05-28 17:00:46] 2025-05-29 00:00:33,635 | INFO     | zombie collector waiting for pid 945940
[2025-05-28 17:00:46] 2025-05-29 00:00:33,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 17:00:46] 2025-05-29 00:00:33,636 | INFO     | collected zombie processes
[2025-05-28 17:00:46] 2025-05-29 00:00:33,636 | INFO     | will attempt to kill all subprocesses of pid=945940
[2025-05-28 17:00:46] 2025-05-29 00:00:33,753 | INFO     | process IDs to be killed: [945940] (in reverse order)
[2025-05-28 17:00:46] 2025-05-29 00:00:33,799 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 17:00:46] 2025-05-29 00:00:33,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 17:00:46] 2025-05-29 00:00:33,805 | INFO     | did not find any defunct processes belonging to 945940
[2025-05-28 17:00:46] 2025-05-29 00:00:33,809 | INFO     | did not find any defunct processes belonging to 945940
[2025-05-28 17:00:46] 2025-05-29 00:00:33,809 | INFO     | ready for new job
[2025-05-28 17:00:46] 2025-05-29 00:00:33,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 17:00:46] 2025-05-29 00:00:33,811 | INFO     | **************************************
[2025-05-28 17:00:46] 2025-05-29 00:00:33,811 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 17:00:46] 2025-05-29 00:00:33,811 | INFO     | **************************************
[2025-05-28 17:00:46] 2025-05-29 00:00:33,812 | INFO     | 
[2025-05-28 17:00:46] 2025-05-29 00:00:33,813 | INFO     | architecture information:
[2025-05-28 17:00:46] 2025-05-29 00:00:33,814 | INFO     | executing command: cat /etc/os-release
[2025-05-28 17:00:46] 2025-05-29 00:00:33,824 | INFO     | cat /etc/os-release:
[2025-05-28 17:00:46] NAME="CentOS Linux"
[2025-05-28 17:00:46] VERSION="7 (Core)"
[2025-05-28 17:00:46] ID="centos"
[2025-05-28 17:00:46] ID_LIKE="rhel fedora"
[2025-05-28 17:00:46] VERSION_ID="7"
[2025-05-28 17:00:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 17:00:46] ANSI_COLOR="0;31"
[2025-05-28 17:00:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 17:00:46] HOME_URL="https://www.centos.org/"
[2025-05-28 17:00:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 17:00:46] 
[2025-05-28 17:00:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 17:00:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 17:00:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 17:00:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 17:00:46] 
[2025-05-28 17:00:46] 2025-05-29 00:00:33,824 | INFO     | **************************************
[2025-05-28 17:00:46] 2025-05-29 00:00:34,327 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | INFO     | sufficient remaining disk space (2111298338816 B)
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | INFO     | update_server=False
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 17:00:46] 2025-05-29 00:00:34,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 17:00:46] 2025-05-29 00:00:34,381 | INFO     | all data control threads have been joined
[2025-05-28 17:00:46] 2025-05-29 00:00:34,518 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 17:00:46] 2025-05-29 00:00:34,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 17:00:46] 2025-05-29 00:00:34,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 17:00:46] 2025-05-29 00:00:34,628 | INFO     | all job control threads have been joined
[2025-05-28 17:00:46] 2025-05-29 00:00:35,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 17:00:46] 2025-05-29 00:00:35,031 | INFO     | aborting loop
[2025-05-28 17:00:46] 2025-05-29 00:00:35,343 | INFO     | [job] retrieve thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:35,349 | INFO     | all payload control threads have been joined
[2025-05-28 17:00:46] 2025-05-29 00:00:35,385 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:35,386 | INFO     | [data] control thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:35,510 | INFO     | [payload] validate_post thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:35,633 | INFO     | [job] control thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:35,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 17:00:46] 2025-05-29 00:00:35,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,036 | INFO     | [job] job monitor thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,063 | INFO     | [payload] failed_post thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,346 | INFO     | [data] copytool_out thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,354 | INFO     | [payload] control thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,661 | INFO     | [job] validate thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,754 | INFO     | [data] copytool_in thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,776 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:36,808 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:37,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 17:00:46] 2025-05-29 00:00:38,165 | INFO     | [job] queue monitor thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:39,861 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 17:00:46] 2025-05-29 00:00:41,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974706763584)>', '<ExcThread(monitor, started 139974041130752)>']
[2025-05-28 17:00:46] 2025-05-29 00:00:41,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 17:00:46] 2025-05-29 00:00:41,549 | INFO     | [monitor] control thread has ended
[2025-05-28 17:00:46] 2025-05-29 00:00:46,056 | INFO     | all workflow threads have been joined
[2025-05-28 17:00:46] 2025-05-29 00:00:46,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 17:00:46] 2025-05-29 00:00:46,057 | INFO     | traces error code: 0
[2025-05-28 17:00:46] 2025-05-29 00:00:46,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 17:00:46] 2025-05-29 00:00:46,170 [wrapper] ==== pilot stdout END ====
[2025-05-28 17:00:46] 2025-05-29 00:00:46,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 17:00:46] 2025-05-29 00:00:46,174 [wrapper] pilotpid: 939612
[2025-05-28 17:00:46] 2025-05-29 00:00:46,176 [wrapper] Pilot exit status: 0
[2025-05-28 17:00:46] 2025-05-29 00:00:46,183 [wrapper] pandaids: 6668863596
[2025-05-28 17:00:46] 2025-05-29 00:00:46,213 [wrapper] cleanup supervisor_pilot  939618 939613
[2025-05-28 17:00:46] 2025-05-29 00:00:46,216 [wrapper] Test setup, not cleaning
[2025-05-28 17:00:46] 2025-05-29 00:00:46,219 [wrapper] apfmon messages muted
[2025-05-28 17:00:46] 2025-05-29 00:00:46,221 [wrapper] ==== wrapper stdout END ====
[2025-05-28 17:00:46] 2025-05-29 00:00:46,223 [wrapper] ==== wrapper stderr END ====
[2025-05-28 17:00:46]  *** Error codes and diagnostics ***
[2025-05-28 17:00:46]     "exeErrorCode": 65,
[2025-05-28 17:00:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 17:00:46]     "pilotErrorCode": 1305,
[2025-05-28 17:00:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 17:00:46]  *** Listing of results directory ***
[2025-05-28 17:00:46] total 226284
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc    495897 May 28 13:14 pilot3.tar.gz
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc      5111 May 28 13:38 queuedata.json
[2025-05-28 17:00:46] -rwx------. 1 boinc boinc     37140 May 28 13:38 runpilot2-wrapper.sh
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc       100 May 28 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 17:00:46] -rwxr-xr-x. 1 boinc boinc      7986 May 28 16:57 run_atlas
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc       105 May 28 16:57 job.xml
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc      6601 May 28 16:57 init_data.xml
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc 227680772 May 28 16:57 EVNT.44871834._003502.pool.root.1
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc     15093 May 28 16:57 start_atlas.sh
[2025-05-28 17:00:46] drwxrwx--x. 2 boinc boinc      4096 May 28 16:57 shared
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc    508879 May 28 16:57 input.tar.gz
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc         0 May 28 16:57 boinc_lockfile
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc      2559 May 28 16:57 pandaJob.out
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc    993733 May 28 16:57 agis_schedconf.cvmfs.json
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc   1603667 May 28 16:57 agis_ddmendpoints.agis.ALL.json
[2025-05-28 17:00:46] drwx------. 4 boinc boinc      4096 May 28 16:57 pilot3
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc       522 May 28 16:58 boinc_task_state.xml
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc       950 May 28 16:58 memory_monitor_summary.json
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc     20541 May 28 16:58 log.44871837._089999.job.log.tgz.1
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc        95 May 28 16:59 pilot_heartbeat.json
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc      8323 May 28 17:00 heartbeat.json
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc      8192 May 28 17:00 boinc_mmap_file
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc        22 May 28 17:00 wrapper_checkpoint.txt
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc      4352 May 28 17:00 pilotlog.txt
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc     72693 May 28 17:00 log.44871837._089999.job.log.1
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc       188 May 28 17:00 output.list
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc       620 May 28 17:00 runtime_log
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc    112640 May 28 17:00 result.tar.gz
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc      8484 May 28 17:00 runtime_log.err
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc       644 May 28 17:00 208KDmCjce7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi2cKDmkhNUnm.diag
[2025-05-28 17:00:46] -rw-r--r--. 1 boinc boinc     21420 May 28 17:00 stderr.txt
[2025-05-28 17:00:46] No HITS result produced
[2025-05-28 17:00:46]  *** Contents of shared directory: ***
[2025-05-28 17:00:46] total 222980
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc 227680772 May 28 16:57 ATLAS.root_0
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc     15093 May 28 16:57 start_atlas.sh
[2025-05-28 17:00:46] -rw-r--r--. 2 boinc boinc    508879 May 28 16:57 input.tar.gz
[2025-05-28 17:00:46] -rw-------. 1 boinc boinc    112640 May 28 17:00 result.tar.gz
17:00:47 (936043): run_atlas exited; CPU time 17.799220
17:00:47 (936043): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN