Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:12 (42457): wrapper (7.7.26015): starting
19:31:12 (42457): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 19:31:12] Arguments: --nthreads 8
[2025-05-28 19:31:12] Threads: 8
[2025-05-28 19:31:12] Checking for CVMFS
[2025-05-28 19:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 19:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 19:31:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 19:31:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 19:31:16] 2.11.2.0 20329 83306 221328 146536 2 64 14459295 18432000 11256 130560 0 192154621 98.771 531199584 37752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-28 19:31:16] CVMFS is ok
[2025-05-28 19:31:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 19:31:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 19:31:16] Further information can be found at the LHC@home message board.
[2025-05-28 19:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 19:31:16] Checking for apptainer binary...
[2025-05-28 19:31:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 19:31:16] Running /usr/bin/apptainer --version
[2025-05-28 19:31:17] apptainer version 1.3.2-1.el7
[2025-05-28 19:31:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 19:32:14] c-211-9.aglt2.org
[2025-05-28 19:32:14] apptainer works
[2025-05-28 19:32:14] Set ATHENA_PROC_NUMBER=8
[2025-05-28 19:32:14] Set ATHENA_CORE_NUMBER=8
[2025-05-28 19:32:14] Starting ATLAS job with PandaID=6668728486
[2025-05-28 19:32:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:57 (7601): wrapper (7.7.26015): starting
07:12:57 (7601): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 07:12:57] Arguments: --nthreads 8
[2025-05-29 07:12:57] Threads: 8
[2025-05-29 07:12:57] This job has been restarted, cleaning up previous attempt
[2025-05-29 07:12:57] Checking for CVMFS
[2025-05-29 07:12:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:12:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:12:59] 2.11.2.0 20329 84008 225604 146558 1 334 18216085 18432001 9852 130560 0 193201784 98.774 532336583 37739 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-29 07:12:59] CVMFS is ok
[2025-05-29 07:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 07:12:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 07:12:59] Further information can be found at the LHC@home message board.
[2025-05-29 07:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:12:59] Checking for apptainer binary...
[2025-05-29 07:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:12:59] Running /usr/bin/apptainer --version
[2025-05-29 07:12:59] apptainer version 1.3.2-1.el7
[2025-05-29 07:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:13:02] c-211-9.aglt2.org
[2025-05-29 07:13:02] apptainer works
[2025-05-29 07:13:03] Set ATHENA_PROC_NUMBER=8
[2025-05-29 07:13:03] Set ATHENA_CORE_NUMBER=8
[2025-05-29 07:13:03] Starting ATLAS job with PandaID=6668728486
[2025-05-29 07:13:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 16:51:20]  *** The last 200 lines of the pilot log: ***
[2025-05-29 16:51:21] 2025-05-29 20:51:01,697 | INFO     | sum of square deviations: 55635237501.63666
[2025-05-29 16:51:21] 2025-05-29 20:51:01,705 | INFO     | sum of deviations: 292891923268.98413
[2025-05-29 16:51:21] 2025-05-29 20:51:01,705 | INFO     | mean x: 1748534617.2358155
[2025-05-29 16:51:21] 2025-05-29 20:51:01,705 | INFO     | mean y: 2452520.654255319
[2025-05-29 16:51:21] 2025-05-29 20:51:01,706 | INFO     | -- intersect: -9202714742.800482
[2025-05-29 16:51:21] 2025-05-29 20:51:01,706 | INFO     | intersect: -9202714742.800482
[2025-05-29 16:51:21] 2025-05-29 20:51:01,707 | INFO     | chi2: 6.029295971559698
[2025-05-29 16:51:21] 2025-05-29 20:51:01,708 | INFO     | sum of square deviations: 54168727711.28445
[2025-05-29 16:51:21] 2025-05-29 20:51:01,716 | INFO     | sum of deviations: 364839799698.9335
[2025-05-29 16:51:21] 2025-05-29 20:51:01,717 | INFO     | mean x: 1748534464.7334526
[2025-05-29 16:51:21] 2025-05-29 20:51:01,717 | INFO     | mean y: 2459960.992844365
[2025-05-29 16:51:21] 2025-05-29 20:51:01,717 | INFO     | -- intersect: -11774352802.271297
[2025-05-29 16:51:21] 2025-05-29 20:51:01,717 | INFO     | intersect: -11774352802.271297
[2025-05-29 16:51:21] 2025-05-29 20:51:01,718 | INFO     | chi2: 4.486083947034121
[2025-05-29 16:51:21] 2025-05-29 20:51:01,718 | INFO     | current chi2=4.486083947034121 (change=25.59522756562187 %)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,719 | INFO     | sum of square deviations: 52728286123.49459
[2025-05-29 16:51:21] 2025-05-29 20:51:01,728 | INFO     | sum of deviations: 360949488287.69696
[2025-05-29 16:51:21] 2025-05-29 20:51:01,728 | INFO     | mean x: 1748534312.234657
[2025-05-29 16:51:21] 2025-05-29 20:51:01,728 | INFO     | mean y: 2459549.1407942236
[2025-05-29 16:51:21] 2025-05-29 20:51:01,729 | INFO     | -- intersect: -11967065949.495895
[2025-05-29 16:51:21] 2025-05-29 20:51:01,729 | INFO     | intersect: -11967065949.495895
[2025-05-29 16:51:21] 2025-05-29 20:51:01,730 | INFO     | chi2: 4.486131237730239
[2025-05-29 16:51:21] 2025-05-29 20:51:01,730 | INFO     | current chi2=4.486131237730239 (change=-0.0010541643151698373 %)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,730 | INFO     | right removable region: 553
[2025-05-29 16:51:21] 2025-05-29 20:51:01,731 | INFO     | sum of square deviations: 54168646218.90519
[2025-05-29 16:51:21] 2025-05-29 20:51:01,739 | INFO     | sum of deviations: 117136160237.85889
[2025-05-29 16:51:21] 2025-05-29 20:51:01,740 | INFO     | mean x: 1748534769.742397
[2025-05-29 16:51:21] 2025-05-29 20:51:01,740 | INFO     | mean y: 2470783.672629696
[2025-05-29 16:51:21] 2025-05-29 20:51:01,740 | INFO     | -- intersect: -3778621476.6418037
[2025-05-29 16:51:21] 2025-05-29 20:51:01,740 | INFO     | intersect: -3778621476.6418037
[2025-05-29 16:51:21] 2025-05-29 20:51:01,741 | INFO     | chi2: 2.4165547195140835
[2025-05-29 16:51:21] 2025-05-29 20:51:01,741 | INFO     | current chi2=2.4165547195140835 (change=59.919786142312184 %)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,742 | INFO     | sum of square deviations: 52728089645.12132
[2025-05-29 16:51:21] 2025-05-29 20:51:01,750 | INFO     | sum of deviations: 44895818958.70215
[2025-05-29 16:51:21] 2025-05-29 20:51:01,751 | INFO     | mean x: 1748534922.2472925
[2025-05-29 16:51:21] 2025-05-29 20:51:01,751 | INFO     | mean y: 2478422.3014440434
[2025-05-29 16:51:21] 2025-05-29 20:51:01,751 | INFO     | -- intersect: -1486327787.8330092
[2025-05-29 16:51:21] 2025-05-29 20:51:01,751 | INFO     | intersect: -1486327787.8330092
[2025-05-29 16:51:21] 2025-05-29 20:51:01,752 | INFO     | chi2: 1.808739033675299
[2025-05-29 16:51:21] 2025-05-29 20:51:01,752 | INFO     | current chi2=1.808739033675299 (change=25.15215901922564 %)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,753 | INFO     | sum of square deviations: 51313301118.309586
[2025-05-29 16:51:21] 2025-05-29 20:51:01,761 | INFO     | sum of deviations: 6420088106.067459
[2025-05-29 16:51:21] 2025-05-29 20:51:01,761 | INFO     | mean x: 1748535074.752277
[2025-05-29 16:51:21] 2025-05-29 20:51:01,762 | INFO     | mean y: 2482565.3460837887
[2025-05-29 16:51:21] 2025-05-29 20:51:01,762 | INFO     | -- intersect: -216286233.2267545
[2025-05-29 16:51:21] 2025-05-29 20:51:01,762 | INFO     | intersect: -216286233.2267545
[2025-05-29 16:51:21] 2025-05-29 20:51:01,763 | INFO     | chi2: 1.6442073006746456
[2025-05-29 16:51:21] 2025-05-29 20:51:01,763 | INFO     | current chi2=1.6442073006746456 (change=9.096488212914295 %)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,763 | INFO     | left removable region: 30
[2025-05-29 16:51:21] 2025-05-29 20:51:01,764 | INFO     | sum of square deviations: 44362900101.54101
[2025-05-29 16:51:21] 2025-05-29 20:51:01,771 | INFO     | sum of deviations: 48422515542.6482
[2025-05-29 16:51:21] 2025-05-29 20:51:01,772 | INFO     | mean x: 1748535196.7667303
[2025-05-29 16:51:21] 2025-05-29 20:51:01,772 | INFO     | mean y: 2493657.554493308
[2025-05-29 16:51:21] 2025-05-29 20:51:01,772 | INFO     | -- intersect: -1906048672.8276305
[2025-05-29 16:51:21] 2025-05-29 20:51:01,772 | INFO     | intersect: -1906048672.8276305
[2025-05-29 16:51:21] 2025-05-29 20:51:01,773 | INFO     | chi2: 0.001525058837373579
[2025-05-29 16:51:21] 2025-05-29 20:51:01,773 | INFO     | -- intersect: -1906048672.8276305
[2025-05-29 16:51:21] 2025-05-29 20:51:01,773 | INFO     | current memory leak: 1.09 B/s (using 523 data points, chi2=0.00)
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | ..............................
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . Timing measurements:
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . get job = 0 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . initial setup = 5 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . payload setup = 65 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . stage-in = 0 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,775 | INFO     | . payload execution = 34419 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,776 | INFO     | . stage-out = 7 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,776 | INFO     | . log creation = 1 s
[2025-05-29 16:51:21] 2025-05-29 20:51:01,776 | INFO     | ..............................
[2025-05-29 16:51:21] 2025-05-29 20:51:02,573 | INFO     | 
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | job summary report
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | --------------------------------------------------
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | PanDA job id: 6668728486
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | task id: 44871837
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | errors: (none)
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 16:51:21] 2025-05-29 20:51:02,574 | INFO     | pilot state: finished 
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | transexitcode: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | exeerrorcode: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | exeerrordiag: 
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | exitcode: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | exitmsg: OK
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | cpuconsumptiontime: 75166 s
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | nevents: 400
[2025-05-29 16:51:21] 2025-05-29 20:51:02,575 | INFO     | neventsw: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:02,592 | INFO     | pid: 41548
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | pgrp: 41548
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | corecount: 8
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | event service: False
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | sizes: {0: 2404962, 1: 2405161, 12: 2405161, 23: 2405189, 33: 2405423, 34: 2405479, 34489: 2444843, 34498: 2453812, 34502: 2453868, 34552: 2454038}
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | --------------------------------------------------
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | 
[2025-05-29 16:51:21] 2025-05-29 20:51:02,593 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-29 16:51:21] 2025-05-29 20:51:02,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 16:51:21] 2025-05-29 20:51:02,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 16:51:21] 2025-05-29 20:51:02,982 | INFO     | job 6668728486 has completed (purged errors)
[2025-05-29 16:51:21] 2025-05-29 20:51:02,982 | INFO     | overall cleanup function is called
[2025-05-29 16:51:21] 2025-05-29 20:51:04,015 | INFO     | --- collectZombieJob: --- 10, [41548]
[2025-05-29 16:51:21] 2025-05-29 20:51:04,016 | INFO     | zombie collector waiting for pid 41548
[2025-05-29 16:51:21] 2025-05-29 20:51:04,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 16:51:21] 2025-05-29 20:51:04,016 | INFO     | collected zombie processes
[2025-05-29 16:51:21] 2025-05-29 20:51:04,016 | INFO     | will attempt to kill all subprocesses of pid=41548
[2025-05-29 16:51:21] 2025-05-29 20:51:05,638 | INFO     | process IDs to be killed: [41548] (in reverse order)
[2025-05-29 16:51:21] 2025-05-29 20:51:05,885 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 16:51:21] 2025-05-29 20:51:05,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 16:51:21] 2025-05-29 20:51:05,891 | INFO     | did not find any defunct processes belonging to 41548
[2025-05-29 16:51:21] 2025-05-29 20:51:05,897 | INFO     | did not find any defunct processes belonging to 41548
[2025-05-29 16:51:21] 2025-05-29 20:51:05,897 | INFO     | ready for new job
[2025-05-29 16:51:21] 2025-05-29 20:51:05,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 16:51:21] 2025-05-29 20:51:05,971 | INFO     | **************************************
[2025-05-29 16:51:21] 2025-05-29 20:51:05,971 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 16:51:21] 2025-05-29 20:51:05,972 | INFO     | **************************************
[2025-05-29 16:51:21] 2025-05-29 20:51:05,972 | INFO     | 
[2025-05-29 16:51:21] 2025-05-29 20:51:05,991 | INFO     | architecture information:
[2025-05-29 16:51:21] 2025-05-29 20:51:05,991 | INFO     | executing command: cat /etc/os-release
[2025-05-29 16:51:21] 2025-05-29 20:51:06,209 | INFO     | cat /etc/os-release:
[2025-05-29 16:51:21] NAME="CentOS Linux"
[2025-05-29 16:51:21] VERSION="7 (Core)"
[2025-05-29 16:51:21] ID="centos"
[2025-05-29 16:51:21] ID_LIKE="rhel fedora"
[2025-05-29 16:51:21] VERSION_ID="7"
[2025-05-29 16:51:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 16:51:21] ANSI_COLOR="0;31"
[2025-05-29 16:51:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 16:51:21] HOME_URL="https://www.centos.org/"
[2025-05-29 16:51:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 16:51:21] 
[2025-05-29 16:51:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 16:51:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 16:51:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 16:51:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 16:51:21] 
[2025-05-29 16:51:21] 2025-05-29 20:51:06,210 | INFO     | **************************************
[2025-05-29 16:51:21] 2025-05-29 20:51:06,713 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-29 16:51:21] 2025-05-29 20:51:06,816 | INFO     | sufficient remaining disk space (56045338624 B)
[2025-05-29 16:51:21] 2025-05-29 20:51:06,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 16:51:21] 2025-05-29 20:51:06,817 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 16:51:21] 2025-05-29 20:51:06,817 | INFO     | update_server=False
[2025-05-29 16:51:21] 2025-05-29 20:51:06,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 16:51:21] 2025-05-29 20:51:06,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 16:51:21] 2025-05-29 20:51:06,920 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 16:51:21] 2025-05-29 20:51:06,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 16:51:21] 2025-05-29 20:51:06,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 16:51:21] 2025-05-29 20:51:06,945 | INFO     | all data control threads have been joined
[2025-05-29 16:51:21] 2025-05-29 20:51:07,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:51:21] 2025-05-29 20:51:07,075 | INFO     | aborting loop
[2025-05-29 16:51:21] 2025-05-29 20:51:07,276 | INFO     | all payload control threads have been joined
[2025-05-29 16:51:21] 2025-05-29 20:51:07,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:51:21] 2025-05-29 20:51:07,823 | INFO     | [job] retrieve thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:07,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 16:51:21] 2025-05-29 20:51:07,951 | INFO     | [data] control thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,081 | INFO     | [job] job monitor thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,209 | INFO     | all job control threads have been joined
[2025-05-29 16:51:21] 2025-05-29 20:51:08,282 | INFO     | [payload] control thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,502 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,508 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,539 | INFO     | [job] validate thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,561 | INFO     | [job] queue monitor thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,744 | INFO     | [payload] validate_post thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:08,825 | INFO     | [data] copytool_out thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:09,126 | INFO     | [payload] failed_post thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:09,216 | INFO     | [job] control thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:09,224 | INFO     | [data] copytool_in thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:09,229 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:09,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:11,896 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 16:51:21] 2025-05-29 20:51:13,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620022437696)>', '<ExcThread(monitor, started 140619208963840)>']
[2025-05-29 16:51:21] 2025-05-29 20:51:13,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 16:51:21] 2025-05-29 20:51:13,992 | INFO     | [monitor] control thread has ended
[2025-05-29 16:51:21] 2025-05-29 20:51:18,363 | INFO     | all workflow threads have been joined
[2025-05-29 16:51:21] 2025-05-29 20:51:18,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 16:51:21] 2025-05-29 20:51:18,364 | INFO     | traces error code: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:18,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 16:51:21] 2025-05-29 20:51:19,236 [wrapper] ==== pilot stdout END ====
[2025-05-29 16:51:21] 2025-05-29 20:51:19,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 16:51:21] 2025-05-29 20:51:19,338 [wrapper] pilotpid: 18669
[2025-05-29 16:51:21] 2025-05-29 20:51:19,386 [wrapper] Pilot exit status: 0
[2025-05-29 16:51:21] 2025-05-29 20:51:19,586 [wrapper] pandaids: 6668728486 6668728486
[2025-05-29 16:51:21] 2025-05-29 20:51:19,920 [wrapper] cleanup supervisor_pilot 29720 18670
[2025-05-29 16:51:21] 2025-05-29 20:51:19,959 [wrapper] Test setup, not cleaning
[2025-05-29 16:51:21] 2025-05-29 20:51:19,987 [wrapper] apfmon messages muted
[2025-05-29 16:51:21] 2025-05-29 20:51:20,005 [wrapper] ==== wrapper stdout END ====
[2025-05-29 16:51:21] 2025-05-29 20:51:20,028 [wrapper] ==== wrapper stderr END ====
[2025-05-29 16:51:21]  *** Error codes and diagnostics ***
[2025-05-29 16:51:21]     "exeErrorCode": 0,
[2025-05-29 16:51:21]     "exeErrorDiag": "",
[2025-05-29 16:51:21]     "pilotErrorCode": 0,
[2025-05-29 16:51:21]     "pilotErrorDiag": "",
[2025-05-29 16:51:21]  *** Listing of results directory ***
[2025-05-29 16:51:21] total 642120
[2025-05-29 16:51:21] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas    495897 May 28 13:15 pilot3.tar.gz
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas      5111 May 28 13:24 queuedata.json
[2025-05-29 16:51:21] -rwx------ 1 boincer umatlas     37140 May 28 13:24 runpilot2-wrapper.sh
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas       100 May 28 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 16:51:21] -rwxr-xr-x 1 boincer umatlas      7986 May 28 19:31 run_atlas
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas       105 May 28 19:31 job.xml
[2025-05-29 16:51:21] -rw-r--r-- 3 boincer umatlas 224152010 May 28 19:31 EVNT.44871834._001916.pool.root.1
[2025-05-29 16:51:21] -rw-r--r-- 3 boincer umatlas 224152010 May 28 19:31 ATLAS.root_0
[2025-05-29 16:51:21] -rw-r--r-- 2 boincer umatlas     15093 May 28 19:31 start_atlas.sh
[2025-05-29 16:51:21] drwxrwx--x 2 boincer umatlas      4096 May 28 19:31 shared
[2025-05-29 16:51:21] -rw-r--r-- 2 boincer umatlas    508884 May 28 19:31 input.tar.gz
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas         0 May 28 19:31 boinc_lockfile
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas      2558 May 29 07:13 pandaJob.out
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas    993012 May 29 07:13 agis_schedconf.cvmfs.json
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas      6132 May 29 16:46 init_data.xml
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas 198698163 May 29 16:48 HITS.44871837._087857.pool.root.1
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas       532 May 29 16:48 boinc_task_state.xml
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas      1063 May 29 16:49 memory_monitor_summary.json
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas   1603667 May 29 16:50 agis_ddmendpoints.agis.ALL.json
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas    570514 May 29 16:50 log.44871837._087857.job.log.tgz.1
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas        96 May 29 16:50 pilot_heartbeat.json
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas      7756 May 29 16:51 heartbeat.json
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas      8192 May 29 16:51 boinc_mmap_file
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas        29 May 29 16:51 wrapper_checkpoint.txt
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas      4353 May 29 16:51 pilotlog.txt
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas   2773007 May 29 16:51 log.44871837._087857.job.log.1
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas       357 May 29 16:51 output.list
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas       620 May 29 16:51 runtime_log
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas   3358720 May 29 16:51 result.tar.gz
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas      8740 May 29 16:51 runtime_log.err
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas       787 May 29 16:51 d00MDmNhZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqrTKDmc9Ev2m.diag
[2025-05-29 16:51:21] -rw-r--r-- 1 boincer umatlas     22968 May 29 16:51 stderr.txt
[2025-05-29 16:51:21] HITS file was successfully produced:
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas 198698163 May 29 16:48 shared/HITS.pool.root.1
[2025-05-29 16:51:21]  *** Contents of shared directory: ***
[2025-05-29 16:51:21] total 416744
[2025-05-29 16:51:21] -rw-r--r-- 3 boincer umatlas 224152010 May 28 19:31 ATLAS.root_0
[2025-05-29 16:51:21] -rw-r--r-- 2 boincer umatlas     15093 May 28 19:31 start_atlas.sh
[2025-05-29 16:51:21] -rw-r--r-- 2 boincer umatlas    508884 May 28 19:31 input.tar.gz
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas 198698163 May 29 16:48 HITS.pool.root.1
[2025-05-29 16:51:21] -rw------- 1 boincer umatlas   3358720 May 29 16:51 result.tar.gz
16:51:22 (7601): run_atlas exited; CPU time 76019.268101
16:51:22 (7601): called boinc_finish(0)

</stderr_txt>
]]>

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