Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:29:21 (1754033): wrapper (7.7.26015): starting
13:29:21 (1754033): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 13:29:21] Arguments: --nthreads 4
[2025-06-03 13:29:21] Threads: 4
[2025-06-03 13:29:21] Checking for CVMFS
[2025-06-03 13:29:21] No cvmfs_config command found, will try listing directly
[2025-06-03 13:29:21] CVMFS is ok
[2025-06-03 13:29:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:29:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:29:21] Further information can be found at the LHC@home message board.
[2025-06-03 13:29:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:29:21] Checking for apptainer binary...
[2025-06-03 13:29:21] which: no apptainer in ((null))
[2025-06-03 13:29:21] apptainer is not installed, using version from CVMFS
[2025-06-03 13:29:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:29:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-03 13:29:21] apptainer works
[2025-06-03 13:29:21] Set ATHENA_PROC_NUMBER=4
[2025-06-03 13:29:21] Set ATHENA_CORE_NUMBER=4
[2025-06-03 13:29:21] Starting ATLAS job with PandaID=6668690135
[2025-06-03 13:29:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:30:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:30:29] 2025-06-03 15:27:55,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:30:29] 2025-06-03 15:27:57,601 | INFO     | monitor loop #1032: job 0:6668690135 is in state 'finished'
[2025-06-03 17:30:29] 2025-06-03 15:27:57,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:30:29] 2025-06-03 15:27:57,640 | INFO     | 14306s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 17:30:29] 2025-06-03 15:27:59,857 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 17:30:29] 2025-06-03 15:27:59,857 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668690135/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:30:29] 2025-06-03 15:27:59,858 | INFO     | extracted standard info from prmon json
[2025-06-03 17:30:29] 2025-06-03 15:27:59,858 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:30:29] 2025-06-03 15:27:59,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:30:29] 2025-06-03 15:27:59,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:30:29] 2025-06-03 15:27:59,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:30:29] 2025-06-03 15:27:59,864 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:30:29] 2025-06-03 15:27:59,865 | INFO     | sum of square deviations: 3972995422.5
[2025-06-03 17:30:29] 2025-06-03 15:27:59,866 | INFO     | sum of deviations: -28137126264.999996
[2025-06-03 17:30:29] 2025-06-03 15:27:59,866 | INFO     | mean x: 1748957311.5
[2025-06-03 17:30:29] 2025-06-03 15:27:59,866 | INFO     | mean y: 2383577.076923077
[2025-06-03 17:30:29] 2025-06-03 15:27:59,867 | INFO     | -- intersect: 12388663316.308218
[2025-06-03 17:30:29] 2025-06-03 15:27:59,867 | INFO     | intersect: 12388663316.308218
[2025-06-03 17:30:29] 2025-06-03 15:27:59,867 | INFO     | chi2: 1.5881430593493688
[2025-06-03 17:30:29] 2025-06-03 15:27:59,868 | INFO     | sum of square deviations: 3723716330.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,869 | INFO     | sum of deviations: -26802625970.999996
[2025-06-03 17:30:29] 2025-06-03 15:27:59,869 | INFO     | mean x: 1748957159.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,869 | INFO     | mean y: 2384393.5982532753
[2025-06-03 17:30:29] 2025-06-03 15:27:59,870 | INFO     | -- intersect: 12591056681.634697
[2025-06-03 17:30:29] 2025-06-03 15:27:59,870 | INFO     | intersect: 12591056681.634697
[2025-06-03 17:30:29] 2025-06-03 15:27:59,870 | INFO     | chi2: 1.5873079267741736
[2025-06-03 17:30:29] 2025-06-03 15:27:59,870 | INFO     | current chi2=1.5873079267741736 (change=0.05258547523655224 %)
[2025-06-03 17:30:29] 2025-06-03 15:27:59,870 | INFO     | right removable region: 228
[2025-06-03 17:30:29] 2025-06-03 15:27:59,871 | INFO     | sum of square deviations: 3723716330.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,872 | INFO     | sum of deviations: -61697944615.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,872 | INFO     | mean x: 1748957464.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,872 | INFO     | mean y: 2403893.135371179
[2025-06-03 17:30:29] 2025-06-03 15:27:59,873 | INFO     | -- intersect: 28980733922.872856
[2025-06-03 17:30:29] 2025-06-03 15:27:59,873 | INFO     | intersect: 28980733922.872856
[2025-06-03 17:30:29] 2025-06-03 15:27:59,873 | INFO     | chi2: 0.08194287557383179
[2025-06-03 17:30:29] 2025-06-03 15:27:59,873 | INFO     | current chi2=0.08194287557383179 (change=94.84033411905585 %)
[2025-06-03 17:30:29] 2025-06-03 15:27:59,874 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,875 | INFO     | sum of deviations: -55649444200.5
[2025-06-03 17:30:29] 2025-06-03 15:27:59,875 | INFO     | mean x: 1748957616.5
[2025-06-03 17:30:29] 2025-06-03 15:27:59,875 | INFO     | mean y: 2400011.1383928573
[2025-06-03 17:30:29] 2025-06-03 15:27:59,875 | INFO     | -- intersect: 27929529120.124672
[2025-06-03 17:30:29] 2025-06-03 15:27:59,876 | INFO     | intersect: 27929529120.124672
[2025-06-03 17:30:29] 2025-06-03 15:27:59,876 | INFO     | chi2: 0.07530901671572324
[2025-06-03 17:30:29] 2025-06-03 15:27:59,876 | INFO     | current chi2=0.07530901671572324 (change=8.095711569374131 %)
[2025-06-03 17:30:29] 2025-06-03 15:27:59,876 | INFO     | left removable region: 20
[2025-06-03 17:30:29] 2025-06-03 15:27:59,876 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,878 | INFO     | sum of deviations: -36684223432.0
[2025-06-03 17:30:29] 2025-06-03 15:27:59,878 | INFO     | mean x: 1748957738.5
[2025-06-03 17:30:29] 2025-06-03 15:27:59,878 | INFO     | mean y: 2389349.951923077
[2025-06-03 17:30:29] 2025-06-03 15:27:59,878 | INFO     | -- intersect: 22995633711.2829
[2025-06-03 17:30:29] 2025-06-03 15:27:59,878 | INFO     | intersect: 22995633711.2829
[2025-06-03 17:30:29] 2025-06-03 15:27:59,879 | INFO     | chi2: 0.028603412841440953
[2025-06-03 17:30:29] 2025-06-03 15:27:59,879 | INFO     | -- intersect: 22995633711.2829
[2025-06-03 17:30:29] 2025-06-03 15:27:59,879 | INFO     | current memory leak: -13.15 B/s (using 208 data points, chi2=0.03)
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | ..............................
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . Timing measurements:
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . get job = 0 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . initial setup = 1 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . payload setup = 8 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . stage-in = 0 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . payload execution = 14268 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . stage-out = 1 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | . log creation = 0 s
[2025-06-03 17:30:29] 2025-06-03 15:27:59,880 | INFO     | ..............................
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | 
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | job summary report
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | --------------------------------------------------
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | PanDA job id: 6668690135
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | task id: 44871837
[2025-06-03 17:30:29] 2025-06-03 15:28:00,325 | INFO     | errors: (none)
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | pilot state: finished 
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | transexitcode: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | exeerrorcode: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | exeerrordiag: 
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | exitcode: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | exitmsg: OK
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | cpuconsumptiontime: 54875 s
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | nevents: 400
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | neventsw: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | pid: 1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | pgrp: 1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | corecount: 4
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | event service: False
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | sizes: {0: 2404406, 1: 2405273, 6: 2405479, 12: 2405507, 14281: 2435584, 14282: 2444731, 14290: 2444845}
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | --------------------------------------------------
[2025-06-03 17:30:29] 2025-06-03 15:28:00,326 | INFO     | 
[2025-06-03 17:30:29] 2025-06-03 15:28:00,327 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-03 17:30:29] 2025-06-03 15:28:00,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:30:29] 2025-06-03 15:28:00,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:30:29] 2025-06-03 15:28:00,350 | INFO     | job 6668690135 has completed (purged errors)
[2025-06-03 17:30:29] 2025-06-03 15:28:00,350 | INFO     | overall cleanup function is called
[2025-06-03 17:30:29] 2025-06-03 15:28:01,145 | INFO     | PID=1758294 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 17:30:29] 2025-06-03 15:28:01,145 | INFO     | .. there are 8 such processes running
[2025-06-03 17:30:29] 2025-06-03 15:28:01,358 | INFO     | --- collectZombieJob: --- 10, [1766921]
[2025-06-03 17:30:29] 2025-06-03 15:28:01,358 | INFO     | zombie collector waiting for pid 1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:01,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:30:29] 2025-06-03 15:28:01,359 | INFO     | collected zombie processes
[2025-06-03 17:30:29] 2025-06-03 15:28:01,359 | INFO     | will attempt to kill all subprocesses of pid=1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:01,715 | INFO     | process IDs to be killed: [1766921] (in reverse order)
[2025-06-03 17:30:29] 2025-06-03 15:28:01,826 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:30:29] 2025-06-03 15:28:01,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:30:29] 2025-06-03 15:28:01,838 | INFO     | did not find any defunct processes belonging to 1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:01,850 | INFO     | did not find any defunct processes belonging to 1766921
[2025-06-03 17:30:29] 2025-06-03 15:28:01,851 | INFO     | ready for new job
[2025-06-03 17:30:29] 2025-06-03 15:28:01,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:30:29] 2025-06-03 15:28:01,854 | INFO     | **************************************
[2025-06-03 17:30:29] 2025-06-03 15:28:01,854 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:30:29] 2025-06-03 15:28:01,854 | INFO     | **************************************
[2025-06-03 17:30:29] 2025-06-03 15:28:01,854 | INFO     | 
[2025-06-03 17:30:29] 2025-06-03 15:28:01,858 | INFO     | architecture information:
[2025-06-03 17:30:29] 2025-06-03 15:28:01,858 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:30:29] 2025-06-03 15:28:01,873 | INFO     | cat /etc/os-release:
[2025-06-03 17:30:29] NAME="CentOS Linux"
[2025-06-03 17:30:29] VERSION="7 (Core)"
[2025-06-03 17:30:29] ID="centos"
[2025-06-03 17:30:29] ID_LIKE="rhel fedora"
[2025-06-03 17:30:29] VERSION_ID="7"
[2025-06-03 17:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:30:29] ANSI_COLOR="0;31"
[2025-06-03 17:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:30:29] HOME_URL="https://www.centos.org/"
[2025-06-03 17:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:30:29] 
[2025-06-03 17:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:30:29] 
[2025-06-03 17:30:29] 2025-06-03 15:28:01,874 | INFO     | **************************************
[2025-06-03 17:30:29] 2025-06-03 15:28:02,376 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-03 17:30:29] 2025-06-03 15:28:02,393 | INFO     | sufficient remaining disk space (641423376384 B)
[2025-06-03 17:30:29] 2025-06-03 15:28:02,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:30:29] 2025-06-03 15:28:02,393 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:30:29] 2025-06-03 15:28:02,393 | INFO     | update_server=False
[2025-06-03 17:30:29] 2025-06-03 15:28:02,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:30:29] 2025-06-03 15:28:02,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:30:29] 2025-06-03 15:28:02,607 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:30:29] 2025-06-03 15:28:02,607 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:30:29] 2025-06-03 15:28:02,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:30:29] 2025-06-03 15:28:02,608 | INFO     | will abort loop
[2025-06-03 17:30:29] 2025-06-03 15:28:02,744 | INFO     | all job control threads have been joined
[2025-06-03 17:30:29] 2025-06-03 15:28:02,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:30:29] 2025-06-03 15:28:03,150 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:30:29] 2025-06-03 15:28:03,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:30:29] 2025-06-03 15:28:03,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:30:29] 2025-06-03 15:28:03,243 | INFO     | all payload control threads have been joined
[2025-06-03 17:30:29] 2025-06-03 15:28:03,398 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:03,445 | INFO     | all data control threads have been joined
[2025-06-03 17:30:29] 2025-06-03 15:28:03,484 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:03,532 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:03,613 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:03,749 | INFO     | [job] control thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,235 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,248 | INFO     | [payload] control thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,290 | INFO     | [job] validate thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,427 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,450 | INFO     | [data] control thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,552 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,824 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,889 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:04,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:30:29] 2025-06-03 15:28:05,998 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:06,770 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:30:29] 2025-06-03 15:28:07,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22803823486784)>', '<ExcThread(monitor, started 22803512268544)>']
[2025-06-03 17:30:29] 2025-06-03 15:28:08,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:30:29] 2025-06-03 15:28:08,175 | INFO     | [monitor] control thread has ended
[2025-06-03 17:30:29] 2025-06-03 15:28:12,689 | INFO     | all workflow threads have been joined
[2025-06-03 17:30:29] 2025-06-03 15:28:12,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:30:29] 2025-06-03 15:28:12,690 | INFO     | traces error code: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:12,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:30:29] 2025-06-03 15:28:12,875 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:30:29] 2025-06-03 15:28:12,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:30:29] 2025-06-03 15:28:12,880 [wrapper] pilotpid: 1758294
[2025-06-03 17:30:29] 2025-06-03 15:28:12,883 [wrapper] Pilot exit status: 0
[2025-06-03 17:30:29] 2025-06-03 15:28:12,894 [wrapper] pandaids: 6668690135
[2025-06-03 17:30:29] 2025-06-03 15:28:12,964 [wrapper] cleanup supervisor_pilot 2155012 1758295
[2025-06-03 17:30:29] 2025-06-03 15:28:12,967 [wrapper] Test setup, not cleaning
[2025-06-03 17:30:29] 2025-06-03 15:28:12,970 [wrapper] apfmon messages muted
[2025-06-03 17:30:29] 2025-06-03 15:28:12,975 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:30:29] 2025-06-03 15:28:12,979 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:30:29]  *** Error codes and diagnostics ***
[2025-06-03 17:30:29]     "exeErrorCode": 0,
[2025-06-03 17:30:29]     "exeErrorDiag": "",
[2025-06-03 17:30:29]     "pilotErrorCode": 0,
[2025-06-03 17:30:29]     "pilotErrorDiag": "",
[2025-06-03 17:30:29]  *** Listing of results directory ***
[2025-06-03 17:30:29] total 420552
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc    495897 May 28 19:15 pilot3.tar.gz
[2025-06-03 17:30:29] -rwx------ 1 boinc boinc     37140 May 28 19:20 runpilot2-wrapper.sh
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc      5111 May 28 19:20 queuedata.json
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc       100 Jun  3 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:30:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 13:29 run_atlas
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc       105 Jun  3 13:29 job.xml
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc      6636 Jun  3 13:29 init_data.xml
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc 224165342 Jun  3 13:29 EVNT.44871834._003418.pool.root.1
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 17:30:29] drwxrwx--x 2 boinc boinc      4096 Jun  3 13:29 shared
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:29 input.tar.gz
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc         0 Jun  3 13:29 boinc_lockfile
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc      2559 Jun  3 13:29 pandaJob.out
[2025-06-03 17:30:29] -rw------- 1 boinc boinc    982666 Jun  3 13:29 agis_schedconf.cvmfs.json
[2025-06-03 17:30:29] drwx------ 4 boinc boinc      4096 Jun  3 13:29 pilot3
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc       528 Jun  3 17:27 boinc_task_state.xml
[2025-06-03 17:30:29] -rw------- 1 boinc boinc 199338848 Jun  3 17:27 HITS.44871837._087738.pool.root.1
[2025-06-03 17:30:29] -rw------- 1 boinc boinc      1036 Jun  3 17:27 memory_monitor_summary.json
[2025-06-03 17:30:29] -rw------- 1 boinc boinc   1603667 Jun  3 17:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:30:29] -rw------- 1 boinc boinc    339571 Jun  3 17:27 log.44871837._087738.job.log.tgz.1
[2025-06-03 17:30:29] -rw------- 1 boinc boinc        95 Jun  3 17:27 pilot_heartbeat.json
[2025-06-03 17:30:29] -rw------- 1 boinc boinc      7733 Jun  3 17:27 heartbeat.json
[2025-06-03 17:30:29] -rw------- 1 boinc boinc      4549 Jun  3 17:28 pilotlog.txt
[2025-06-03 17:30:29] -rw------- 1 boinc boinc   1318199 Jun  3 17:28 log.44871837._087738.job.log.1
[2025-06-03 17:30:29] -rw------- 1 boinc boinc       357 Jun  3 17:28 output.list
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc       620 Jun  3 17:28 runtime_log
[2025-06-03 17:30:29] -rw------- 1 boinc boinc   1679360 Jun  3 17:28 result.tar.gz
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc      9026 Jun  3 17:28 runtime_log.err
[2025-06-03 17:30:29] -rw------- 1 boinc boinc       666 Jun  3 17:28 WRzLDmDdZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVqTKDmLhIUCo.diag
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc        26 Jun  3 17:30 wrapper_checkpoint.txt
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc      8192 Jun  3 17:30 boinc_mmap_file
[2025-06-03 17:30:29] -rw-r--r-- 1 boinc boinc     20933 Jun  3 17:30 stderr.txt
[2025-06-03 17:30:29] HITS file was successfully produced:
[2025-06-03 17:30:29] -rw------- 1 boinc boinc 199338848 Jun  3 17:27 shared/HITS.pool.root.1
[2025-06-03 17:30:29]  *** Contents of shared directory: ***
[2025-06-03 17:30:29] total 415740
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc 224165342 Jun  3 13:29 ATLAS.root_0
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 17:30:29] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:29 input.tar.gz
[2025-06-03 17:30:29] -rw------- 1 boinc boinc 199338848 Jun  3 17:27 HITS.pool.root.1
[2025-06-03 17:30:29] -rw------- 1 boinc boinc   1679360 Jun  3 17:28 result.tar.gz
17:30:31 (1754033): run_atlas exited; CPU time 55383.342119
17:30:31 (1754033): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN