Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:07 (2904819): wrapper (7.7.26015): starting
20:56:07 (2904819): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 20:56:07] Arguments: --nthreads 9
[2025-05-28 20:56:07] Threads: 9
[2025-05-28 20:56:07] Checking for CVMFS
[2025-05-28 20:56:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 20:56:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 20:56:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 20:56:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 20:56:07] 2.12.6.0 34032 22107 313008 146537 0 400 22066583 29414401 15878 16776704 0 62828726 99.462 86868430 32518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 20:56:07] CVMFS is ok
[2025-05-28 20:56:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 20:56:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 20:56:07] Further information can be found at the LHC@home message board.
[2025-05-28 20:56:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 20:56:07] Checking for apptainer binary...
[2025-05-28 20:56:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 20:56:07] Running /usr/bin/apptainer --version
[2025-05-28 20:56:07] apptainer version 1.4.1-1.el9
[2025-05-28 20:56:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 20:56:08] c6-5-37-4.aglt2.org
[2025-05-28 20:56:08] apptainer works
[2025-05-28 20:56:08] Set ATHENA_PROC_NUMBER=9
[2025-05-28 20:56:08] Set ATHENA_CORE_NUMBER=9
[2025-05-28 20:56:08] Starting ATLAS job with PandaID=6668689982
[2025-05-28 20:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 01:41:40]  *** The last 200 lines of the pilot log: ***
[2025-05-29 01:41:40] 2025-05-29 05:41:24,205 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668689982/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,206 | INFO     | extracted standard info from prmon json
[2025-05-29 01:41:40] 2025-05-29 05:41:24,206 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 01:41:40] 2025-05-29 05:41:24,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 01:41:40] 2025-05-29 05:41:24,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 01:41:40] 2025-05-29 05:41:24,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 01:41:40] 2025-05-29 05:41:24,251 | INFO     | fitting pss+swap vs Time
[2025-05-29 01:41:40] 2025-05-29 05:41:24,252 | INFO     | sum of square deviations: 6662013025.482057
[2025-05-29 01:41:40] 2025-05-29 05:41:24,260 | INFO     | sum of deviations: -28798328928.41008
[2025-05-29 01:41:40] 2025-05-29 05:41:24,260 | INFO     | mean x: 1748488721.9568346
[2025-05-29 01:41:40] 2025-05-29 05:41:24,261 | INFO     | mean y: 2137582.215827338
[2025-05-29 01:41:40] 2025-05-29 05:41:24,261 | INFO     | -- intersect: 7560446632.3373165
[2025-05-29 01:41:40] 2025-05-29 05:41:24,261 | INFO     | intersect: 7560446632.3373165
[2025-05-29 01:41:40] 2025-05-29 05:41:24,261 | INFO     | chi2: 2.9302804193540335
[2025-05-29 01:41:40] 2025-05-29 05:41:24,262 | INFO     | sum of square deviations: 6308995867.846171
[2025-05-29 01:41:40] 2025-05-29 05:41:24,296 | INFO     | sum of deviations: 852403855.0000157
[2025-05-29 01:41:40] 2025-05-29 05:41:24,296 | INFO     | mean x: 1748488569.4615386
[2025-05-29 01:41:40] 2025-05-29 05:41:24,296 | INFO     | mean y: 2150297.476190476
[2025-05-29 01:41:40] 2025-05-29 05:41:24,296 | INFO     | -- intersect: -234086724.7460625
[2025-05-29 01:41:40] 2025-05-29 05:41:24,297 | INFO     | intersect: -234086724.7460625
[2025-05-29 01:41:40] 2025-05-29 05:41:24,297 | INFO     | chi2: 2.053817242961287
[2025-05-29 01:41:40] 2025-05-29 05:41:24,297 | INFO     | current chi2=2.053817242961287 (change=29.910556361904728 %)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,298 | INFO     | sum of square deviations: 5968626297.46272
[2025-05-29 01:41:40] 2025-05-29 05:41:24,306 | INFO     | sum of deviations: 7861830333.746272
[2025-05-29 01:41:40] 2025-05-29 05:41:24,306 | INFO     | mean x: 1748488416.9552238
[2025-05-29 01:41:40] 2025-05-29 05:41:24,307 | INFO     | mean y: 2153430.895522388
[2025-05-29 01:41:40] 2025-05-29 05:41:24,307 | INFO     | -- intersect: -2300942556.277636
[2025-05-29 01:41:40] 2025-05-29 05:41:24,307 | INFO     | intersect: -2300942556.277636
[2025-05-29 01:41:40] 2025-05-29 05:41:24,307 | INFO     | chi2: 2.0247783295413546
[2025-05-29 01:41:40] 2025-05-29 05:41:24,323 | INFO     | current chi2=2.0247783295413546 (change=1.4138995823242213 %)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,323 | INFO     | right removable region: 267
[2025-05-29 01:41:40] 2025-05-29 05:41:24,323 | INFO     | sum of square deviations: 6308935111.919464
[2025-05-29 01:41:40] 2025-05-29 05:41:24,345 | INFO     | sum of deviations: -67966254647.63364
[2025-05-29 01:41:40] 2025-05-29 05:41:24,345 | INFO     | mean x: 1748488874.4652014
[2025-05-29 01:41:40] 2025-05-29 05:41:24,345 | INFO     | mean y: 2154392.249084249
[2025-05-29 01:41:40] 2025-05-29 05:41:24,345 | INFO     | -- intersect: 18838651833.14608
[2025-05-29 01:41:40] 2025-05-29 05:41:24,345 | INFO     | intersect: 18838651833.14608
[2025-05-29 01:41:40] 2025-05-29 05:41:24,346 | INFO     | chi2: 1.4331942311368469
[2025-05-29 01:41:40] 2025-05-29 05:41:24,346 | INFO     | current chi2=1.4331942311368469 (change=51.090202095648316 %)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,346 | INFO     | sum of square deviations: 5968571763.761216
[2025-05-29 01:41:40] 2025-05-29 05:41:24,369 | INFO     | sum of deviations: -60817385282.791016
[2025-05-29 01:41:40] 2025-05-29 05:41:24,369 | INFO     | mean x: 1748489026.9701493
[2025-05-29 01:41:40] 2025-05-29 05:41:24,369 | INFO     | mean y: 2151161.276119403
[2025-05-29 01:41:40] 2025-05-29 05:41:24,369 | INFO     | -- intersect: 17818562695.71071
[2025-05-29 01:41:40] 2025-05-29 05:41:24,369 | INFO     | intersect: 17818562695.71071
[2025-05-29 01:41:40] 2025-05-29 05:41:24,370 | INFO     | chi2: 1.4021946446315428
[2025-05-29 01:41:40] 2025-05-29 05:41:24,370 | INFO     | current chi2=1.4021946446315428 (change=2.162971761386063 %)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,370 | INFO     | left removable region: 20
[2025-05-29 01:41:40] 2025-05-29 05:41:24,370 | INFO     | sum of square deviations: 4672607415.303668
[2025-05-29 01:41:40] 2025-05-29 05:41:24,372 | INFO     | sum of deviations: 3681088219.2348166
[2025-05-29 01:41:40] 2025-05-29 05:41:24,372 | INFO     | mean x: 1748488996.45749
[2025-05-29 01:41:40] 2025-05-29 05:41:24,372 | INFO     | mean y: 2154522.927125506
[2025-05-29 01:41:40] 2025-05-29 05:41:24,372 | INFO     | -- intersect: -1375308138.5498781
[2025-05-29 01:41:40] 2025-05-29 05:41:24,372 | INFO     | intersect: -1375308138.5498781
[2025-05-29 01:41:40] 2025-05-29 05:41:24,412 | INFO     | chi2: 0.24547533660819326
[2025-05-29 01:41:40] 2025-05-29 05:41:24,412 | INFO     | -- intersect: -1375308138.5498781
[2025-05-29 01:41:40] 2025-05-29 05:41:24,412 | INFO     | current memory leak: 0.79 B/s (using 247 data points, chi2=0.25)
[2025-05-29 01:41:40] 2025-05-29 05:41:24,413 | INFO     | ..............................
[2025-05-29 01:41:40] 2025-05-29 05:41:24,413 | INFO     | . Timing measurements:
[2025-05-29 01:41:40] 2025-05-29 05:41:24,413 | INFO     | . get job = 0 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,413 | INFO     | . initial setup = 4 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,413 | INFO     | . payload setup = 22 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,414 | INFO     | . stage-in = 0 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,414 | INFO     | . payload execution = 16971 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,414 | INFO     | . stage-out = 7 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,414 | INFO     | . log creation = 1 s
[2025-05-29 01:41:40] 2025-05-29 05:41:24,414 | INFO     | ..............................
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | 
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | job summary report
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | --------------------------------------------------
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | PanDA job id: 6668689982
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | task id: 44871837
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | errors: (none)
[2025-05-29 01:41:40] 2025-05-29 05:41:25,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | pilot state: finished 
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | transexitcode: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | exeerrorcode: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | exeerrordiag: 
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | exitcode: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | exitmsg: OK
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | cpuconsumptiontime: 51736 s
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | nevents: 400
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | neventsw: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:25,118 | INFO     | pid: 2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | pgrp: 2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | corecount: 9
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | event service: False
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | sizes: {0: 2405063, 1: 2405262, 12: 2405262, 16: 2405496, 23: 2405524, 16999: 2437103, 17000: 2437230, 17008: 2446227, 17012: 2446283, 17048: 2446453}
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | --------------------------------------------------
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | 
[2025-05-29 01:41:40] 2025-05-29 05:41:25,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-29 01:41:40] 2025-05-29 05:41:25,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | job 6668689982 has completed (purged errors)
[2025-05-29 01:41:40] 2025-05-29 05:41:25,233 | INFO     | overall cleanup function is called
[2025-05-29 01:41:40] 2025-05-29 05:41:26,246 | INFO     | --- collectZombieJob: --- 10, [2917863]
[2025-05-29 01:41:40] 2025-05-29 05:41:26,246 | INFO     | zombie collector waiting for pid 2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:26,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 01:41:40] 2025-05-29 05:41:26,246 | INFO     | collected zombie processes
[2025-05-29 01:41:40] 2025-05-29 05:41:26,246 | INFO     | will attempt to kill all subprocesses of pid=2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:26,862 | INFO     | process IDs to be killed: [2917863] (in reverse order)
[2025-05-29 01:41:40] 2025-05-29 05:41:26,974 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 01:41:40] 2025-05-29 05:41:26,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 01:41:40] 2025-05-29 05:41:26,987 | INFO     | did not find any defunct processes belonging to 2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:26,999 | INFO     | did not find any defunct processes belonging to 2917863
[2025-05-29 01:41:40] 2025-05-29 05:41:27,000 | INFO     | ready for new job
[2025-05-29 01:41:40] 2025-05-29 05:41:27,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 01:41:40] 2025-05-29 05:41:27,003 | INFO     | **************************************
[2025-05-29 01:41:40] 2025-05-29 05:41:27,003 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 01:41:40] 2025-05-29 05:41:27,003 | INFO     | **************************************
[2025-05-29 01:41:40] 2025-05-29 05:41:27,003 | INFO     | 
[2025-05-29 01:41:40] 2025-05-29 05:41:27,044 | INFO     | architecture information:
[2025-05-29 01:41:40] 2025-05-29 05:41:27,044 | INFO     | executing command: cat /etc/os-release
[2025-05-29 01:41:40] 2025-05-29 05:41:27,211 | INFO     | cat /etc/os-release:
[2025-05-29 01:41:40] NAME="CentOS Linux"
[2025-05-29 01:41:40] VERSION="7 (Core)"
[2025-05-29 01:41:40] ID="centos"
[2025-05-29 01:41:40] ID_LIKE="rhel fedora"
[2025-05-29 01:41:40] VERSION_ID="7"
[2025-05-29 01:41:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 01:41:40] ANSI_COLOR="0;31"
[2025-05-29 01:41:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 01:41:40] HOME_URL="https://www.centos.org/"
[2025-05-29 01:41:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 01:41:40] 
[2025-05-29 01:41:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 01:41:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 01:41:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 01:41:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 01:41:40] 
[2025-05-29 01:41:40] 2025-05-29 05:41:27,211 | INFO     | **************************************
[2025-05-29 01:41:40] 2025-05-29 05:41:27,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-29 01:41:40] 2025-05-29 05:41:27,781 | INFO     | sufficient remaining disk space (74265395200 B)
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | INFO     | update_server=False
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 01:41:40] 2025-05-29 05:41:27,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 01:41:40] 2025-05-29 05:41:27,783 | INFO     | aborting loop
[2025-05-29 01:41:40] 2025-05-29 05:41:28,030 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 01:41:40] 2025-05-29 05:41:28,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 01:41:40] 2025-05-29 05:41:28,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 01:41:40] 2025-05-29 05:41:28,055 | INFO     | all data control threads have been joined
[2025-05-29 01:41:40] 2025-05-29 05:41:28,093 | INFO     | all payload control threads have been joined
[2025-05-29 01:41:40] 2025-05-29 05:41:28,449 | INFO     | all job control threads have been joined
[2025-05-29 01:41:40] 2025-05-29 05:41:28,791 | INFO     | [job] retrieve thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:28,791 | INFO     | [job] job monitor thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:28,831 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:28,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 01:41:40] 2025-05-29 05:41:28,892 | INFO     | [payload] failed_post thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:28,901 | INFO     | [payload] validate_post thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,061 | INFO     | [data] control thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,113 | INFO     | [payload] control thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,339 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,455 | INFO     | [job] control thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,609 | INFO     | [job] validate thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:29,863 | INFO     | [data] copytool_in thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:30,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 01:41:40] 2025-05-29 05:41:30,216 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:30,864 | INFO     | [data] copytool_out thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:31,172 | INFO     | [job] queue monitor thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:31,799 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 01:41:40] 2025-05-29 05:41:32,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231319394112)>', '<ExcThread(monitor, started 140230564747008)>']
[2025-05-29 01:41:40] 2025-05-29 05:41:33,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 01:41:40] 2025-05-29 05:41:33,073 | INFO     | [monitor] control thread has ended
[2025-05-29 01:41:40] 2025-05-29 05:41:37,811 | INFO     | all workflow threads have been joined
[2025-05-29 01:41:40] 2025-05-29 05:41:37,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 01:41:40] 2025-05-29 05:41:37,811 | INFO     | traces error code: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:37,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 01:41:40] 2025-05-29 05:41:38,537 [wrapper] ==== pilot stdout END ====
[2025-05-29 01:41:40] 2025-05-29 05:41:38,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 01:41:40] 2025-05-29 05:41:38,641 [wrapper] pilotpid: 2909639
[2025-05-29 01:41:40] 2025-05-29 05:41:38,679 [wrapper] Pilot exit status: 0
[2025-05-29 01:41:40] 2025-05-29 05:41:38,870 [wrapper] pandaids: 6668689982
[2025-05-29 01:41:40] 2025-05-29 05:41:38,981 [wrapper] supervise_pilot (15 min periods counter: 20)
[2025-05-29 01:41:40] 2025-05-29 05:41:39,885 [wrapper] cleanup supervisor_pilot 3887081 2909640
[2025-05-29 01:41:40] 2025-05-29 05:41:39,909 [wrapper] Test setup, not cleaning
[2025-05-29 01:41:40] 2025-05-29 05:41:39,925 [wrapper] apfmon messages muted
[2025-05-29 01:41:40] 2025-05-29 05:41:39,968 [wrapper] ==== wrapper stdout END ====
[2025-05-29 01:41:40] 2025-05-29 05:41:40,026 [wrapper] ==== wrapper stderr END ====
[2025-05-29 01:41:40]  *** Error codes and diagnostics ***
[2025-05-29 01:41:40]     "exeErrorCode": 0,
[2025-05-29 01:41:40]     "exeErrorDiag": "",
[2025-05-29 01:41:40]     "pilotErrorCode": 0,
[2025-05-29 01:41:40]     "pilotErrorDiag": "",
[2025-05-29 01:41:40]  *** Listing of results directory ***
[2025-05-29 01:41:40] total 417232
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:15 pilot3.tar.gz
[2025-05-29 01:41:40] -rwx------. 1 boincer umatlas     37140 May 28 13:16 runpilot2-wrapper.sh
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas      5111 May 28 13:16 queuedata.json
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas       100 May 28 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 01:41:40] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 20:56 run_atlas
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas       105 May 28 20:56 job.xml
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas 225461519 May 28 20:56 EVNT.44871834._003412.pool.root.1
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas     15093 May 28 20:56 start_atlas.sh
[2025-05-29 01:41:40] drwxrwx--x. 2 boincer umatlas      4096 May 28 20:56 shared
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas    508880 May 28 20:56 input.tar.gz
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas         0 May 28 20:56 boinc_lockfile
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas      2559 May 28 20:56 pandaJob.out
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas    993399 May 28 20:56 agis_schedconf.cvmfs.json
[2025-05-29 01:41:40] drwx------. 4 boincer umatlas      4096 May 28 20:56 pilot3
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas      6841 May 29 01:36 init_data.xml
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas 194314039 May 29 01:38 HITS.44871837._087585.pool.root.1
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas       531 May 29 01:38 boinc_task_state.xml
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas      1042 May 29 01:40 memory_monitor_summary.json
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas   1603667 May 29 01:40 agis_ddmendpoints.agis.ALL.json
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas    426134 May 29 01:40 log.44871837._087585.job.log.tgz.1
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas        95 May 29 01:41 pilot_heartbeat.json
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas      7720 May 29 01:41 heartbeat.json
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas      4353 May 29 01:41 pilotlog.txt
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas        28 May 29 01:41 wrapper_checkpoint.txt
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas   1385566 May 29 01:41 log.44871837._087585.job.log.1
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas       357 May 29 01:41 output.list
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas       620 May 29 01:41 runtime_log
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas   1832960 May 29 01:41 result.tar.gz
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas      8665 May 29 01:41 runtime_log.err
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas       657 May 29 01:41 kxHMDmPZZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtpTKDmQm0HEo.diag
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas      8192 May 29 01:41 boinc_mmap_file
[2025-05-29 01:41:40] -rw-r--r--. 1 boincer umatlas     20931 May 29 01:41 stderr.txt
[2025-05-29 01:41:40] HITS file was successfully produced:
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas 194314039 May 29 01:38 shared/HITS.pool.root.1
[2025-05-29 01:41:40]  *** Contents of shared directory: ***
[2025-05-29 01:41:40] total 412252
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas 225461519 May 28 20:56 ATLAS.root_0
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas     15093 May 28 20:56 start_atlas.sh
[2025-05-29 01:41:40] -rw-r--r--. 2 boincer umatlas    508880 May 28 20:56 input.tar.gz
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas 194314039 May 29 01:38 HITS.pool.root.1
[2025-05-29 01:41:40] -rw-------. 1 boincer umatlas   1832960 May 29 01:41 result.tar.gz
01:42:02 (2904819): run_atlas exited; CPU time 52123.808309
01:42:02 (2904819): called boinc_finish(0)

</stderr_txt>
]]>

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