Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:07:28 (2950300): wrapper (7.7.26015): starting
06:07:28 (2950300): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 06:07:28] Arguments: --nthreads 4
[2025-06-04 06:07:28] Threads: 4
[2025-06-04 06:07:28] Checking for CVMFS
[2025-06-04 06:07:28] No cvmfs_config command found, will try listing directly
[2025-06-04 06:07:28] CVMFS is ok
[2025-06-04 06:07:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:07:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:07:28] Further information can be found at the LHC@home message board.
[2025-06-04 06:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:07:28] Checking for apptainer binary...
[2025-06-04 06:07:28] which: no apptainer in ((null))
[2025-06-04 06:07:28] apptainer is not installed, using version from CVMFS
[2025-06-04 06:07:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:07:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-04 06:07:28] apptainer works
[2025-06-04 06:07:28] Set ATHENA_PROC_NUMBER=4
[2025-06-04 06:07:28] Set ATHENA_CORE_NUMBER=4
[2025-06-04 06:07:28] Starting ATLAS job with PandaID=6668688933
[2025-06-04 06:07:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:12:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:12:25] 2025-06-04 08:09:52,803 | INFO     | executing command: lscpu
[2025-06-04 10:12:25] 2025-06-04 08:09:52,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:12:25] 2025-06-04 08:09:53,216 | INFO     | monitor loop #1065: job 0:6668688933 is in state 'finished'
[2025-06-04 10:12:25] 2025-06-04 08:09:53,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:12:25] 2025-06-04 08:09:53,255 | INFO     | PID=2953883 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:12:25] 2025-06-04 08:09:53,256 | INFO     | .. there are 4 such processes running
[2025-06-04 10:12:25] 2025-06-04 08:09:55,719 | INFO     | monitor loop #1066: job 0:6668688933 is in state 'finished'
[2025-06-04 10:12:25] 2025-06-04 08:09:55,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,060 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:12:25] 2025-06-04 08:09:56,061 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6668688933/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,061 | INFO     | extracted standard info from prmon json
[2025-06-04 10:12:25] 2025-06-04 08:09:56,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:12:25] 2025-06-04 08:09:56,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:12:25] 2025-06-04 08:09:56,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:12:25] 2025-06-04 08:09:56,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:12:25] 2025-06-04 08:09:56,067 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:12:25] 2025-06-04 08:09:56,068 | INFO     | sum of square deviations: 4180243959.5
[2025-06-04 10:12:25] 2025-06-04 08:09:56,070 | INFO     | sum of deviations: 6815778422.5
[2025-06-04 10:12:25] 2025-06-04 08:09:56,070 | INFO     | mean x: 1749017311.5
[2025-06-04 10:12:25] 2025-06-04 08:09:56,070 | INFO     | mean y: 2349967.794117647
[2025-06-04 10:12:25] 2025-06-04 08:09:56,070 | INFO     | -- intersect: -2849377005.032254
[2025-06-04 10:12:25] 2025-06-04 08:09:56,070 | INFO     | intersect: -2849377005.032254
[2025-06-04 10:12:25] 2025-06-04 08:09:56,071 | INFO     | chi2: 1.7716291247847213
[2025-06-04 10:12:25] 2025-06-04 08:09:56,071 | INFO     | sum of square deviations: 3922276332.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,073 | INFO     | sum of deviations: 6721105537.9999895
[2025-06-04 10:12:25] 2025-06-04 08:09:56,073 | INFO     | mean x: 1749017159.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,073 | INFO     | mean y: 2349911.819742489
[2025-06-04 10:12:25] 2025-06-04 08:09:56,074 | INFO     | -- intersect: -2994718096.2412224
[2025-06-04 10:12:25] 2025-06-04 08:09:56,074 | INFO     | intersect: -2994718096.2412224
[2025-06-04 10:12:25] 2025-06-04 08:09:56,074 | INFO     | chi2: 1.772118197681366
[2025-06-04 10:12:25] 2025-06-04 08:09:56,074 | INFO     | current chi2=1.772118197681366 (change=-0.027605828432297405 %)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,075 | INFO     | right removable region: 232
[2025-06-04 10:12:25] 2025-06-04 08:09:56,075 | INFO     | sum of square deviations: 3922276332.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,077 | INFO     | sum of deviations: -32550917905.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,077 | INFO     | mean x: 1749017464.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,077 | INFO     | mean y: 2373055.939914163
[2025-06-04 10:12:25] 2025-06-04 08:09:56,077 | INFO     | -- intersect: 14517445189.076733
[2025-06-04 10:12:25] 2025-06-04 08:09:56,078 | INFO     | intersect: 14517445189.076733
[2025-06-04 10:12:25] 2025-06-04 08:09:56,078 | INFO     | chi2: 0.11484252819947806
[2025-06-04 10:12:25] 2025-06-04 08:09:56,078 | INFO     | current chi2=0.11484252819947806 (change=93.51768795213088 %)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,078 | INFO     | sum of square deviations: 3675146117.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,080 | INFO     | sum of deviations: -30804731386.499996
[2025-06-04 10:12:25] 2025-06-04 08:09:56,080 | INFO     | mean x: 1749017616.5
[2025-06-04 10:12:25] 2025-06-04 08:09:56,080 | INFO     | mean y: 2371963.197368421
[2025-06-04 10:12:25] 2025-06-04 08:09:56,080 | INFO     | -- intersect: 14662474215.273067
[2025-06-04 10:12:25] 2025-06-04 08:09:56,080 | INFO     | intersect: 14662474215.273067
[2025-06-04 10:12:25] 2025-06-04 08:09:56,081 | INFO     | chi2: 0.11166287371331009
[2025-06-04 10:12:25] 2025-06-04 08:09:56,081 | INFO     | current chi2=0.11166287371331009 (change=2.768708192007934 %)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,081 | INFO     | left removable region: 20
[2025-06-04 10:12:25] 2025-06-04 08:09:56,081 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,083 | INFO     | sum of deviations: -20598691730.999992
[2025-06-04 10:12:25] 2025-06-04 08:09:56,083 | INFO     | mean x: 1749017738.5
[2025-06-04 10:12:25] 2025-06-04 08:09:56,083 | INFO     | mean y: 2365924.169811321
[2025-06-04 10:12:25] 2025-06-04 08:09:56,083 | INFO     | -- intersect: 12196683712.313381
[2025-06-04 10:12:25] 2025-06-04 08:09:56,083 | INFO     | intersect: 12196683712.313381
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | chi2: 0.09642752256774736
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | -- intersect: 12196683712.313381
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | current memory leak: -6.97 B/s (using 212 data points, chi2=0.10)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | ..............................
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | . Timing measurements:
[2025-06-04 10:12:25] 2025-06-04 08:09:56,084 | INFO     | . get job = 0 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . initial setup = 1 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . payload setup = 6 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . stage-in = 0 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . payload execution = 14505 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . stage-out = 1 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | . log creation = 0 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,085 | INFO     | ..............................
[2025-06-04 10:12:25] 2025-06-04 08:09:56,356 | INFO     | 
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | job summary report
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | --------------------------------------------------
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | PanDA job id: 6668688933
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | task id: 44871837
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | errors: (none)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | pilot state: finished 
[2025-06-04 10:12:25] 2025-06-04 08:09:56,357 | INFO     | transexitcode: 0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | exeerrorcode: 0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | exeerrordiag: 
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | exitcode: 0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | exitmsg: OK
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | cpuconsumptiontime: 56032 s
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | nevents: 400
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | neventsw: 0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,358 | INFO     | pid: 2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | pgrp: 2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | corecount: 4
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | event service: False
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | sizes: {0: 2405245, 4: 2405451, 11: 2405479, 14515: 2436066, 14516: 2445029, 14520: 2445085, 14523: 2445383}
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | --------------------------------------------------
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | 
[2025-06-04 10:12:25] 2025-06-04 08:09:56,359 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-04 10:12:25] 2025-06-04 08:09:56,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | job 6668688933 has completed (purged errors)
[2025-06-04 10:12:25] 2025-06-04 08:09:56,383 | INFO     | overall cleanup function is called
[2025-06-04 10:12:25] 2025-06-04 08:09:57,391 | INFO     | --- collectZombieJob: --- 10, [2960727]
[2025-06-04 10:12:25] 2025-06-04 08:09:57,391 | INFO     | zombie collector waiting for pid 2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:57,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:12:25] 2025-06-04 08:09:57,392 | INFO     | collected zombie processes
[2025-06-04 10:12:25] 2025-06-04 08:09:57,392 | INFO     | will attempt to kill all subprocesses of pid=2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:57,697 | INFO     | process IDs to be killed: [2960727] (in reverse order)
[2025-06-04 10:12:25] 2025-06-04 08:09:57,778 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:12:25] 2025-06-04 08:09:57,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:12:25] 2025-06-04 08:09:57,786 | INFO     | did not find any defunct processes belonging to 2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:57,794 | INFO     | did not find any defunct processes belonging to 2960727
[2025-06-04 10:12:25] 2025-06-04 08:09:57,794 | INFO     | ready for new job
[2025-06-04 10:12:25] 2025-06-04 08:09:57,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:12:25] 2025-06-04 08:09:57,797 | INFO     | **************************************
[2025-06-04 10:12:25] 2025-06-04 08:09:57,797 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:12:25] 2025-06-04 08:09:57,797 | INFO     | **************************************
[2025-06-04 10:12:25] 2025-06-04 08:09:57,797 | INFO     | 
[2025-06-04 10:12:25] 2025-06-04 08:09:57,800 | INFO     | architecture information:
[2025-06-04 10:12:25] 2025-06-04 08:09:57,800 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:12:25] 2025-06-04 08:09:57,812 | INFO     | cat /etc/os-release:
[2025-06-04 10:12:25] NAME="CentOS Linux"
[2025-06-04 10:12:25] VERSION="7 (Core)"
[2025-06-04 10:12:25] ID="centos"
[2025-06-04 10:12:25] ID_LIKE="rhel fedora"
[2025-06-04 10:12:25] VERSION_ID="7"
[2025-06-04 10:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:12:25] ANSI_COLOR="0;31"
[2025-06-04 10:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:12:25] HOME_URL="https://www.centos.org/"
[2025-06-04 10:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:12:25] 
[2025-06-04 10:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:12:25] 
[2025-06-04 10:12:25] 2025-06-04 08:09:57,813 | INFO     | **************************************
[2025-06-04 10:12:25] 2025-06-04 08:09:58,316 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-04 10:12:25] 2025-06-04 08:09:58,329 | INFO     | sufficient remaining disk space (1647600205824 B)
[2025-06-04 10:12:25] 2025-06-04 08:09:58,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:12:25] 2025-06-04 08:09:58,329 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:12:25] 2025-06-04 08:09:58,329 | INFO     | update_server=False
[2025-06-04 10:12:25] 2025-06-04 08:09:58,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:12:25] 2025-06-04 08:09:58,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:12:25] 2025-06-04 08:09:59,069 | INFO     | all payload control threads have been joined
[2025-06-04 10:12:25] 2025-06-04 08:09:59,097 | INFO     | all data control threads have been joined
[2025-06-04 10:12:25] 2025-06-04 08:09:59,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:25] 2025-06-04 08:09:59,224 | INFO     | aborting loop
[2025-06-04 10:12:25] 2025-06-04 08:09:59,268 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:12:25] 2025-06-04 08:09:59,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:12:25] 2025-06-04 08:09:59,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:12:25] 2025-06-04 08:09:59,335 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:09:59,398 | INFO     | [job] validate thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:09:59,448 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:09:59,693 | INFO     | all job control threads have been joined
[2025-06-04 10:12:25] 2025-06-04 08:09:59,792 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:09:59,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:12:25] 2025-06-04 08:10:00,054 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,075 | INFO     | [payload] control thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,103 | INFO     | [data] control thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,229 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,477 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,620 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,698 | INFO     | [job] control thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:00,735 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:01,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:25] 2025-06-04 08:10:01,830 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:02,200 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:02,720 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:12:25] 2025-06-04 08:10:03,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22465308546880)>', '<ExcThread(monitor, started 22465069676288)>']
[2025-06-04 10:12:25] 2025-06-04 08:10:03,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:12:25] 2025-06-04 08:10:03,285 | INFO     | [monitor] control thread has ended
[2025-06-04 10:12:25] 2025-06-04 08:10:08,195 | INFO     | all workflow threads have been joined
[2025-06-04 10:12:25] 2025-06-04 08:10:08,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:12:25] 2025-06-04 08:10:08,196 | INFO     | traces error code: 0
[2025-06-04 10:12:25] 2025-06-04 08:10:08,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:12:25] 2025-06-04 08:10:08,325 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:12:25] 2025-06-04 08:10:08,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:12:25] 2025-06-04 08:10:08,331 [wrapper] pilotpid: 2953883
[2025-06-04 10:12:25] 2025-06-04 08:10:08,333 [wrapper] Pilot exit status: 0
[2025-06-04 10:12:25] 2025-06-04 08:10:08,343 [wrapper] pandaids: 6668688933
[2025-06-04 10:12:25] 2025-06-04 08:10:08,397 [wrapper] cleanup supervisor_pilot 3198616 2953884
[2025-06-04 10:12:25] 2025-06-04 08:10:08,400 [wrapper] Test setup, not cleaning
[2025-06-04 10:12:25] 2025-06-04 08:10:08,403 [wrapper] apfmon messages muted
[2025-06-04 10:12:25] 2025-06-04 08:10:08,405 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:12:25] 2025-06-04 08:10:08,408 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:12:25]  *** Error codes and diagnostics ***
[2025-06-04 10:12:25]     "exeErrorCode": 0,
[2025-06-04 10:12:25]     "exeErrorDiag": "",
[2025-06-04 10:12:25]     "pilotErrorCode": 0,
[2025-06-04 10:12:25]     "pilotErrorDiag": "",
[2025-06-04 10:12:25]  *** Listing of results directory ***
[2025-06-04 10:12:25] total 417228
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc    495897 May 28 18:21 pilot3.tar.gz
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc      5111 May 28 18:36 queuedata.json
[2025-06-04 10:12:25] -rwx------ 1 boinc boinc     37140 May 28 18:37 runpilot2-wrapper.sh
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:12:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:07 run_atlas
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:07 job.xml
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc      6419 Jun  4 06:07 init_data.xml
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc 223455509 Jun  4 06:07 EVNT.44871834._003398.pool.root.1
[2025-06-04 10:12:25] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:07 shared
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc    508883 Jun  4 06:07 input.tar.gz
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:07 start_atlas.sh
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:07 boinc_lockfile
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc      2559 Jun  4 06:07 pandaJob.out
[2025-06-04 10:12:25] -rw------- 1 boinc boinc    986077 Jun  4 06:07 agis_schedconf.cvmfs.json
[2025-06-04 10:12:25] drwx------ 4 boinc boinc      4096 Jun  4 06:07 pilot3
[2025-06-04 10:12:25] -rw------- 1 boinc boinc 196565810 Jun  4 10:09 HITS.44871837._087232.pool.root.1
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:09 boinc_task_state.xml
[2025-06-04 10:12:25] -rw------- 1 boinc boinc        95 Jun  4 10:09 pilot_heartbeat.json
[2025-06-04 10:12:25] -rw------- 1 boinc boinc      1036 Jun  4 10:09 memory_monitor_summary.json
[2025-06-04 10:12:25] -rw------- 1 boinc boinc   1603667 Jun  4 10:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:12:25] -rw------- 1 boinc boinc    334878 Jun  4 10:09 log.44871837._087232.job.log.tgz.1
[2025-06-04 10:12:25] -rw------- 1 boinc boinc      7731 Jun  4 10:09 heartbeat.json
[2025-06-04 10:12:25] -rw------- 1 boinc boinc      4364 Jun  4 10:10 pilotlog.txt
[2025-06-04 10:12:25] -rw------- 1 boinc boinc   1359541 Jun  4 10:10 log.44871837._087232.job.log.1
[2025-06-04 10:12:25] -rw------- 1 boinc boinc       357 Jun  4 10:10 output.list
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:10 runtime_log
[2025-06-04 10:12:25] -rw------- 1 boinc boinc   1710080 Jun  4 10:10 result.tar.gz
[2025-06-04 10:12:25] -rw------- 1 boinc boinc       664 Jun  4 10:10 FueNDmQxYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIccKDmEZqPBn.diag
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc      9026 Jun  4 10:10 runtime_log.err
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc        26 Jun  4 10:12 wrapper_checkpoint.txt
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:12 boinc_mmap_file
[2025-06-04 10:12:25] -rw-r--r-- 1 boinc boinc     21002 Jun  4 10:12 stderr.txt
[2025-06-04 10:12:25] HITS file was successfully produced:
[2025-06-04 10:12:25] -rw------- 1 boinc boinc 196565810 Jun  4 10:09 shared/HITS.pool.root.1
[2025-06-04 10:12:25]  *** Contents of shared directory: ***
[2025-06-04 10:12:25] total 412376
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc 223455509 Jun  4 06:07 ATLAS.root_0
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc    508883 Jun  4 06:07 input.tar.gz
[2025-06-04 10:12:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:07 start_atlas.sh
[2025-06-04 10:12:25] -rw------- 1 boinc boinc 196565810 Jun  4 10:09 HITS.pool.root.1
[2025-06-04 10:12:25] -rw------- 1 boinc boinc   1710080 Jun  4 10:10 result.tar.gz
10:12:27 (2950300): run_atlas exited; CPU time 56617.965492
10:12:27 (2950300): called boinc_finish(0)

</stderr_txt>
]]>

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