Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:55 (2105083): wrapper (7.7.26015): starting
19:50:55 (2105083): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 19:50:55] Arguments: --nthreads 9
[2025-05-28 19:50:55] Threads: 9
[2025-05-28 19:50:55] Checking for CVMFS
[2025-05-28 19:50:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 19:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 19:50:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 19:51:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 19:51:16] 2.12.6.0 8433 22104 420872 146536 2 346 35986095 40960001 17463 16776704 1 65524664 99.603 67326409 23269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 19:51:16] CVMFS is ok
[2025-05-28 19:51:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 19:51:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 19:51:16] Further information can be found at the LHC@home message board.
[2025-05-28 19:51:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 19:51:16] Checking for apptainer binary...
[2025-05-28 19:51:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 19:51:16] Running /usr/bin/apptainer --version
[2025-05-28 19:51:17] apptainer version 1.4.1-1.el9
[2025-05-28 19:51:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 19:51:18] c6-5-7-1.aglt2.org
[2025-05-28 19:51:18] apptainer works
[2025-05-28 19:51:18] Set ATHENA_PROC_NUMBER=9
[2025-05-28 19:51:18] Set ATHENA_CORE_NUMBER=9
[2025-05-28 19:51:19] Starting ATLAS job with PandaID=6668443544
[2025-05-28 19:51:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 04:12:15]  *** The last 200 lines of the pilot log: ***
[2025-05-29 04:12:15] 2025-05-29 08:11:53,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 04:12:15] 2025-05-29 08:11:53,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 04:12:15] 2025-05-29 08:11:53,223 | INFO     | fitting pss+swap vs Time
[2025-05-29 04:12:15] 2025-05-29 08:11:53,224 | INFO     | sum of square deviations: 35813169246.91587
[2025-05-29 04:12:15] 2025-05-29 08:11:53,229 | INFO     | sum of deviations: 132009530635.1172
[2025-05-29 04:12:15] 2025-05-29 08:11:53,229 | INFO     | mean x: 1748491398.7433264
[2025-05-29 04:12:15] 2025-05-29 08:11:53,229 | INFO     | mean y: 2150061.112936345
[2025-05-29 04:12:15] 2025-05-29 08:11:53,230 | INFO     | -- intersect: -6442896097.082724
[2025-05-29 04:12:15] 2025-05-29 08:11:53,230 | INFO     | intersect: -6442896097.082724
[2025-05-29 04:12:15] 2025-05-29 08:11:53,230 | INFO     | chi2: 3.8852186723312165
[2025-05-29 04:12:15] 2025-05-29 08:11:53,231 | INFO     | sum of square deviations: 34721406342.12447
[2025-05-29 04:12:15] 2025-05-29 08:11:53,236 | INFO     | sum of deviations: 158118590580.36517
[2025-05-29 04:12:15] 2025-05-29 08:11:53,236 | INFO     | mean x: 1748491246.2489626
[2025-05-29 04:12:15] 2025-05-29 08:11:53,236 | INFO     | mean y: 2153687.730290456
[2025-05-29 04:12:15] 2025-05-29 08:11:53,236 | INFO     | -- intersect: -7960339788.911418
[2025-05-29 04:12:15] 2025-05-29 08:11:53,236 | INFO     | intersect: -7960339788.911418
[2025-05-29 04:12:15] 2025-05-29 08:11:53,237 | INFO     | chi2: 3.571720034737163
[2025-05-29 04:12:15] 2025-05-29 08:11:53,237 | INFO     | current chi2=3.571720034737163 (change=8.069008826366716 %)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,237 | INFO     | right removable region: 481
[2025-05-29 04:12:15] 2025-05-29 08:11:53,238 | INFO     | sum of square deviations: 34721244814.12449
[2025-05-29 04:12:15] 2025-05-29 08:11:53,242 | INFO     | sum of deviations: 17707003563.44814
[2025-05-29 04:12:15] 2025-05-29 08:11:53,242 | INFO     | mean x: 1748491551.2489626
[2025-05-29 04:12:15] 2025-05-29 08:11:53,243 | INFO     | mean y: 2166002.8962655603
[2025-05-29 04:12:15] 2025-05-29 08:11:53,243 | INFO     | -- intersect: -889522826.0719199
[2025-05-29 04:12:15] 2025-05-29 08:11:53,243 | INFO     | intersect: -889522826.0719199
[2025-05-29 04:12:15] 2025-05-29 08:11:53,243 | INFO     | chi2: 1.095241569793375
[2025-05-29 04:12:15] 2025-05-29 08:11:53,244 | INFO     | current chi2=1.095241569793375 (change=71.81004051089342 %)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,244 | INFO     | sum of square deviations: 33651710003.790363
[2025-05-29 04:12:15] 2025-05-29 08:11:53,248 | INFO     | sum of deviations: -23976713854.111107
[2025-05-29 04:12:15] 2025-05-29 08:11:53,249 | INFO     | mean x: 1748491703.7568135
[2025-05-29 04:12:15] 2025-05-29 08:11:53,249 | INFO     | mean y: 2171938.111111111
[2025-05-29 04:12:15] 2025-05-29 08:11:53,249 | INFO     | -- intersect: 1247965547.188995
[2025-05-29 04:12:15] 2025-05-29 08:11:53,249 | INFO     | intersect: 1247965547.188995
[2025-05-29 04:12:15] 2025-05-29 08:11:53,250 | INFO     | chi2: 0.7222945324245511
[2025-05-29 04:12:15] 2025-05-29 08:11:53,250 | INFO     | current chi2=0.7222945324245511 (change=34.051577994723395 %)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,250 | INFO     | sum of square deviations: 32604361655.896255
[2025-05-29 04:12:15] 2025-05-29 08:11:53,255 | INFO     | sum of deviations: -37559744539.76904
[2025-05-29 04:12:15] 2025-05-29 08:11:53,255 | INFO     | mean x: 1748491856.2648306
[2025-05-29 04:12:15] 2025-05-29 08:11:53,255 | INFO     | mean y: 2173915.5741525423
[2025-05-29 04:12:15] 2025-05-29 08:11:53,255 | INFO     | -- intersect: 2016410788.0601118
[2025-05-29 04:12:15] 2025-05-29 08:11:53,255 | INFO     | intersect: 2016410788.0601118
[2025-05-29 04:12:15] 2025-05-29 08:11:53,256 | INFO     | chi2: 0.6791207333553253
[2025-05-29 04:12:15] 2025-05-29 08:11:53,256 | INFO     | current chi2=0.6791207333553253 (change=5.9773121809883865 %)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,256 | INFO     | left removable region: 30
[2025-05-29 04:12:15] 2025-05-29 08:11:53,257 | INFO     | sum of square deviations: 28442902421.56532
[2025-05-29 04:12:15] 2025-05-29 08:11:53,260 | INFO     | sum of deviations: -8530487520.689551
[2025-05-29 04:12:15] 2025-05-29 08:11:53,261 | INFO     | mean x: 1748492130.7871397
[2025-05-29 04:12:15] 2025-05-29 08:11:53,261 | INFO     | mean y: 2177435.2949002218
[2025-05-29 04:12:15] 2025-05-29 08:11:53,261 | INFO     | -- intersect: 526578569.9130994
[2025-05-29 04:12:15] 2025-05-29 08:11:53,261 | INFO     | intersect: 526578569.9130994
[2025-05-29 04:12:15] 2025-05-29 08:11:53,262 | INFO     | chi2: 0.3033359121908313
[2025-05-29 04:12:15] 2025-05-29 08:11:53,262 | INFO     | -- intersect: 526578569.9130994
[2025-05-29 04:12:15] 2025-05-29 08:11:53,262 | INFO     | current memory leak: -0.30 B/s (using 451 data points, chi2=0.30)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,263 | INFO     | ..............................
[2025-05-29 04:12:15] 2025-05-29 08:11:53,263 | INFO     | . Timing measurements:
[2025-05-29 04:12:15] 2025-05-29 08:11:53,263 | INFO     | . get job = 1 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,263 | INFO     | . initial setup = 8 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,263 | INFO     | . payload setup = 75 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,264 | INFO     | . stage-in = 0 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,264 | INFO     | . payload execution = 29746 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,264 | INFO     | . stage-out = 3 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,264 | INFO     | . log creation = 0 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,264 | INFO     | ..............................
[2025-05-29 04:12:15] 2025-05-29 08:11:53,369 | INFO     | 
[2025-05-29 04:12:15] 2025-05-29 08:11:53,370 | INFO     | job summary report
[2025-05-29 04:12:15] 2025-05-29 08:11:53,371 | INFO     | --------------------------------------------------
[2025-05-29 04:12:15] 2025-05-29 08:11:53,371 | INFO     | PanDA job id: 6668443544
[2025-05-29 04:12:15] 2025-05-29 08:11:53,371 | INFO     | task id: 44871837
[2025-05-29 04:12:15] 2025-05-29 08:11:53,372 | INFO     | errors: (none)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,372 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 04:12:15] 2025-05-29 08:11:53,372 | INFO     | pilot state: finished 
[2025-05-29 04:12:15] 2025-05-29 08:11:53,372 | INFO     | transexitcode: 0
[2025-05-29 04:12:15] 2025-05-29 08:11:53,372 | INFO     | exeerrorcode: 0
[2025-05-29 04:12:15] 2025-05-29 08:11:53,374 | INFO     | exeerrordiag: 
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | exitcode: 0
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | exitmsg: OK
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | cpuconsumptiontime: 56424 s
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | nevents: 400
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | neventsw: 0
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | pid: 2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | pgrp: 2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:53,375 | INFO     | corecount: 9
[2025-05-29 04:12:15] 2025-05-29 08:11:53,376 | INFO     | event service: False
[2025-05-29 04:12:15] 2025-05-29 08:11:53,376 | INFO     | sizes: {0: 2404406, 1: 2405007, 2: 2405119, 3: 2405318, 15: 2405318, 26: 2405346, 38: 2405502, 45: 2405736, 49: 2405764, 29825: 2442997, 29829: 2451966, 29830: 245
[2025-05-29 04:12:15] 2025-05-29 08:11:53,376 | INFO     | --------------------------------------------------
[2025-05-29 04:12:15] 2025-05-29 08:11:53,376 | INFO     | 
[2025-05-29 04:12:15] 2025-05-29 08:11:53,377 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 04:12:15] 2025-05-29 08:11:53,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 04:12:15] 2025-05-29 08:11:53,457 | INFO     | job 6668443544 has completed (purged errors)
[2025-05-29 04:12:15] 2025-05-29 08:11:53,457 | INFO     | overall cleanup function is called
[2025-05-29 04:12:15] 2025-05-29 08:11:53,511 | INFO     | PID=2115450 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 04:12:15] 2025-05-29 08:11:53,511 | INFO     | .. there are 17 such processes running
[2025-05-29 04:12:15] 2025-05-29 08:11:54,471 | INFO     | --- collectZombieJob: --- 10, [2127750]
[2025-05-29 04:12:15] 2025-05-29 08:11:54,472 | INFO     | zombie collector waiting for pid 2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:54,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 04:12:15] 2025-05-29 08:11:54,472 | INFO     | collected zombie processes
[2025-05-29 04:12:15] 2025-05-29 08:11:54,472 | INFO     | will attempt to kill all subprocesses of pid=2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:54,517 | INFO     | 29965s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-29 04:12:15] 2025-05-29 08:11:55,278 | INFO     | process IDs to be killed: [2127750] (in reverse order)
[2025-05-29 04:12:15] 2025-05-29 08:11:55,548 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 04:12:15] 2025-05-29 08:11:55,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 04:12:15] 2025-05-29 08:11:55,565 | INFO     | did not find any defunct processes belonging to 2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:55,588 | INFO     | did not find any defunct processes belonging to 2127750
[2025-05-29 04:12:15] 2025-05-29 08:11:55,588 | INFO     | ready for new job
[2025-05-29 04:12:15] 2025-05-29 08:11:55,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 04:12:15] 2025-05-29 08:11:55,596 | INFO     | **************************************
[2025-05-29 04:12:15] 2025-05-29 08:11:55,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 04:12:15] 2025-05-29 08:11:55,596 | INFO     | **************************************
[2025-05-29 04:12:15] 2025-05-29 08:11:55,596 | INFO     | 
[2025-05-29 04:12:15] 2025-05-29 08:11:55,604 | INFO     | architecture information:
[2025-05-29 04:12:15] 2025-05-29 08:11:55,604 | INFO     | executing command: cat /etc/os-release
[2025-05-29 04:12:15] 2025-05-29 08:11:55,651 | INFO     | cat /etc/os-release:
[2025-05-29 04:12:15] NAME="CentOS Linux"
[2025-05-29 04:12:15] VERSION="7 (Core)"
[2025-05-29 04:12:15] ID="centos"
[2025-05-29 04:12:15] ID_LIKE="rhel fedora"
[2025-05-29 04:12:15] VERSION_ID="7"
[2025-05-29 04:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 04:12:15] ANSI_COLOR="0;31"
[2025-05-29 04:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 04:12:15] HOME_URL="https://www.centos.org/"
[2025-05-29 04:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 04:12:15] 
[2025-05-29 04:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 04:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 04:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 04:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 04:12:15] 
[2025-05-29 04:12:15] 2025-05-29 08:11:55,654 | INFO     | **************************************
[2025-05-29 04:12:15] 2025-05-29 08:11:56,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 04:12:15] 2025-05-29 08:11:56,218 | INFO     | sufficient remaining disk space (74304192512 B)
[2025-05-29 04:12:15] 2025-05-29 08:11:56,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 04:12:15] 2025-05-29 08:11:56,218 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 04:12:15] 2025-05-29 08:11:56,219 | INFO     | update_server=False
[2025-05-29 04:12:15] 2025-05-29 08:11:56,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 04:12:15] 2025-05-29 08:11:56,219 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 04:12:15] 2025-05-29 08:11:56,220 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 04:12:15] 2025-05-29 08:11:56,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 04:12:15] 2025-05-29 08:11:56,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 04:12:15] 2025-05-29 08:11:56,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:12:15] 2025-05-29 08:11:56,246 | INFO     | aborting loop
[2025-05-29 04:12:15] 2025-05-29 08:11:56,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 04:12:15] 2025-05-29 08:11:56,305 | INFO     | all job control threads have been joined
[2025-05-29 04:12:15] 2025-05-29 08:11:56,391 | INFO     | all payload control threads have been joined
[2025-05-29 04:12:15] 2025-05-29 08:11:56,395 | INFO     | all data control threads have been joined
[2025-05-29 04:12:15] 2025-05-29 08:11:56,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 04:12:15] 2025-05-29 08:11:57,225 | INFO     | [job] retrieve thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,252 | INFO     | [job] job monitor thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,292 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,311 | INFO     | [job] control thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,397 | INFO     | [payload] control thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,416 | INFO     | [data] control thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:57,567 | INFO     | [job] validate thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,099 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,100 | INFO     | [payload] validate_post thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,265 | INFO     | [data] copytool_out thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:12:15] 2025-05-29 08:11:58,603 | INFO     | [payload] failed_post thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,608 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:58,642 | INFO     | [data] copytool_in thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:11:59,390 | INFO     | [job] queue monitor thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:12:00,886 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:12:06,593 | INFO     | job.realtimelogging is not enabled
[2025-05-29 04:12:15] 2025-05-29 08:12:07,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 04:12:15] 2025-05-29 08:12:09,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619121026880)>', '<ExcThread(monitor, started 140618462373632)>']
[2025-05-29 04:12:15] 2025-05-29 08:12:09,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 04:12:15] 2025-05-29 08:12:09,346 | INFO     | [monitor] control thread has ended
[2025-05-29 04:12:15] 2025-05-29 08:12:14,172 | INFO     | all workflow threads have been joined
[2025-05-29 04:12:15] 2025-05-29 08:12:14,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 04:12:15] 2025-05-29 08:12:14,215 | INFO     | traces error code: 0
[2025-05-29 04:12:15] 2025-05-29 08:12:14,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 04:12:15] 2025-05-29 08:12:14,824 [wrapper] ==== pilot stdout END ====
[2025-05-29 04:12:15] 2025-05-29 08:12:14,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 04:12:15] 2025-05-29 08:12:14,847 [wrapper] pilotpid: 2115450
[2025-05-29 04:12:15] 2025-05-29 08:12:14,850 [wrapper] Pilot exit status: 0
[2025-05-29 04:12:15] 2025-05-29 08:12:14,928 [wrapper] pandaids: 6668443544
[2025-05-29 04:12:15] 2025-05-29 08:12:15,030 [wrapper] cleanup supervisor_pilot 3735777 2115451
[2025-05-29 04:12:15] 2025-05-29 08:12:15,034 [wrapper] Test setup, not cleaning
[2025-05-29 04:12:15] 2025-05-29 08:12:15,037 [wrapper] apfmon messages muted
[2025-05-29 04:12:15] 2025-05-29 08:12:15,040 [wrapper] ==== wrapper stdout END ====
[2025-05-29 04:12:15] 2025-05-29 08:12:15,043 [wrapper] ==== wrapper stderr END ====
[2025-05-29 04:12:15]  *** Error codes and diagnostics ***
[2025-05-29 04:12:15]     "exeErrorCode": 0,
[2025-05-29 04:12:15]     "exeErrorDiag": "",
[2025-05-29 04:12:15]     "pilotErrorCode": 0,
[2025-05-29 04:12:15]     "pilotErrorDiag": "",
[2025-05-29 04:12:15]  *** Listing of results directory ***
[2025-05-29 04:12:15] total 424680
[2025-05-29 04:12:15] -rwx------. 1 boincer umatlas     37140 May 28 09:15 runpilot2-wrapper.sh
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:15 queuedata.json
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas       100 May 28 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 04:12:15] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 19:50 run_atlas
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas       105 May 28 19:50 job.xml
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas 224874881 May 28 19:50 EVNT.44871834._003312.pool.root.1
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 19:50 start_atlas.sh
[2025-05-29 04:12:15] drwxrwx--x. 2 boincer umatlas      4096 May 28 19:50 shared
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas    508875 May 28 19:50 input.tar.gz
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas         0 May 28 19:50 boinc_lockfile
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas      2559 May 28 19:51 pandaJob.out
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas    993733 May 28 19:52 agis_schedconf.cvmfs.json
[2025-05-29 04:12:15] drwx------. 4 boincer umatlas      4096 May 28 19:52 pilot3
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas      6839 May 29 04:10 init_data.xml
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas 200192965 May 29 04:10 HITS.44871837._084887.pool.root.1
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas       531 May 29 04:10 boinc_task_state.xml
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas      1040 May 29 04:11 memory_monitor_summary.json
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas   1603667 May 29 04:11 agis_ddmendpoints.agis.ALL.json
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas    551004 May 29 04:11 log.44871837._084887.job.log.tgz.1
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas      7722 May 29 04:11 heartbeat.json
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas        95 May 29 04:11 pilot_heartbeat.json
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas      8192 May 29 04:12 boinc_mmap_file
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas        28 May 29 04:12 wrapper_checkpoint.txt
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas      4548 May 29 04:12 pilotlog.txt
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas   2425474 May 29 04:12 log.44871837._084887.job.log.1
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas       357 May 29 04:12 output.list
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas       620 May 29 04:12 runtime_log
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas   3000320 May 29 04:12 result.tar.gz
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas       657 May 29 04:12 TCXMDmOoVe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeYTKDm78KPQn.diag
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas      8660 May 29 04:12 runtime_log.err
[2025-05-29 04:12:15] -rw-r--r--. 1 boincer umatlas     21072 May 29 04:12 stderr.txt
[2025-05-29 04:12:15] HITS file was successfully produced:
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas 200192965 May 29 04:10 shared/HITS.pool.root.1
[2025-05-29 04:12:15]  *** Contents of shared directory: ***
[2025-05-29 04:12:15] total 418564
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas 224874881 May 28 19:50 ATLAS.root_0
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 19:50 start_atlas.sh
[2025-05-29 04:12:15] -rw-r--r--. 2 boincer umatlas    508875 May 28 19:50 input.tar.gz
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas 200192965 May 29 04:10 HITS.pool.root.1
[2025-05-29 04:12:15] -rw-------. 1 boincer umatlas   3000320 May 29 04:12 result.tar.gz
04:12:16 (2105083): run_atlas exited; CPU time 57305.244607
04:12:16 (2105083): called boinc_finish(0)

</stderr_txt>
]]>

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