Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:20 (2589565): wrapper (7.7.26015): starting
19:31:20 (2589565): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 19:31:20] Arguments: --nthreads 9
[2025-05-28 19:31:20] Threads: 9
[2025-05-28 19:31:20] Checking for CVMFS
[2025-05-28 19:31:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 19:31:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 19:31:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 19:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 19:31:22] 2.12.6.0 34032 22022 308144 146536 0 290 21612341 29414400 15731 16776704 0 62581775 99.454 86509728 32446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 19:31:22] CVMFS is ok
[2025-05-28 19:31:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 19:31:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 19:31:22] Further information can be found at the LHC@home message board.
[2025-05-28 19:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 19:31:22] Checking for apptainer binary...
[2025-05-28 19:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 19:31:22] Running /usr/bin/apptainer --version
[2025-05-28 19:31:22] apptainer version 1.4.1-1.el9
[2025-05-28 19:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 19:31:23] c6-5-37-4.aglt2.org
[2025-05-28 19:31:23] apptainer works
[2025-05-28 19:31:23] Set ATHENA_PROC_NUMBER=9
[2025-05-28 19:31:23] Set ATHENA_CORE_NUMBER=9
[2025-05-28 19:31:23] Starting ATLAS job with PandaID=6668688152
[2025-05-28 19:31:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 00:37:27]  *** The last 200 lines of the pilot log: ***
[2025-05-29 00:37:27] 2025-05-29 04:37:04,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 00:37:27] 2025-05-29 04:37:06,561 | INFO     | monitor loop #1134: job 0:6668688152 is in state 'finished'
[2025-05-29 00:37:27] 2025-05-29 04:37:06,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 00:37:27] 2025-05-29 04:37:09,066 | INFO     | monitor loop #1135: job 0:6668688152 is in state 'finished'
[2025-05-29 00:37:27] 2025-05-29 04:37:09,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 00:37:27] 2025-05-29 04:37:11,572 | INFO     | monitor loop #1136: job 0:6668688152 is in state 'finished'
[2025-05-29 00:37:27] 2025-05-29 04:37:11,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,845 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 00:37:27] 2025-05-29 04:37:12,845 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6668688152/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,846 | INFO     | extracted standard info from prmon json
[2025-05-29 00:37:27] 2025-05-29 04:37:12,846 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 00:37:27] 2025-05-29 04:37:12,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 00:37:27] 2025-05-29 04:37:12,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 00:37:27] 2025-05-29 04:37:12,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 00:37:27] 2025-05-29 04:37:12,910 | INFO     | fitting pss+swap vs Time
[2025-05-29 00:37:27] 2025-05-29 04:37:12,910 | INFO     | sum of square deviations: 8205427200.979853
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | sum of deviations: -76784782061.08728
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | mean x: 1748484329.899329
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | mean y: 2190372.063758389
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | -- intersect: 16364164577.686335
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | intersect: 16364164577.686335
[2025-05-29 00:37:27] 2025-05-29 04:37:12,925 | INFO     | chi2: 3.7629399157597248
[2025-05-29 00:37:27] 2025-05-29 04:37:12,926 | INFO     | sum of square deviations: 7799307042.668908
[2025-05-29 00:37:27] 2025-05-29 04:37:12,954 | INFO     | sum of deviations: -56383104414.77473
[2025-05-29 00:37:27] 2025-05-29 04:37:12,954 | INFO     | mean x: 1748484177.4061434
[2025-05-29 00:37:27] 2025-05-29 04:37:12,954 | INFO     | mean y: 2197950.208191126
[2025-05-29 00:37:27] 2025-05-29 04:37:12,954 | INFO     | -- intersect: 12642419113.82281
[2025-05-29 00:37:27] 2025-05-29 04:37:12,955 | INFO     | intersect: 12642419113.82281
[2025-05-29 00:37:27] 2025-05-29 04:37:12,955 | INFO     | chi2: 3.1098671505808584
[2025-05-29 00:37:27] 2025-05-29 04:37:12,955 | INFO     | current chi2=3.1098671505808584 (change=17.35538647438151 %)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,955 | INFO     | right removable region: 292
[2025-05-29 00:37:27] 2025-05-29 04:37:12,955 | INFO     | sum of square deviations: 7799234452.66891
[2025-05-29 00:37:27] 2025-05-29 04:37:12,957 | INFO     | sum of deviations: -132919610565.66904
[2025-05-29 00:37:27] 2025-05-29 04:37:12,957 | INFO     | mean x: 1748484482.4061434
[2025-05-29 00:37:27] 2025-05-29 04:37:12,957 | INFO     | mean y: 2211362.593856655
[2025-05-29 00:37:27] 2025-05-29 04:37:12,958 | INFO     | -- intersect: 29801017629.02295
[2025-05-29 00:37:27] 2025-05-29 04:37:12,958 | INFO     | intersect: 29801017629.02295
[2025-05-29 00:37:27] 2025-05-29 04:37:12,958 | INFO     | chi2: 1.6658769269112863
[2025-05-29 00:37:27] 2025-05-29 04:37:12,958 | INFO     | current chi2=1.6658769269112863 (change=55.729377449415075 %)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,959 | INFO     | sum of square deviations: 7406669866.829819
[2025-05-29 00:37:27] 2025-05-29 04:37:12,960 | INFO     | sum of deviations: -131036012372.5104
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | mean x: 1748484634.9131944
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | mean y: 2210583.7395833335
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | -- intersect: 30935741897.144077
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | intersect: 30935741897.144077
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | chi2: 1.5734647896850211
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | current chi2=1.5734647896850211 (change=5.547356814504127 %)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,961 | INFO     | left removable region: 20
[2025-05-29 00:37:27] 2025-05-29 04:37:12,962 | INFO     | sum of square deviations: 6239422663.9375
[2025-05-29 00:37:27] 2025-05-29 04:37:12,963 | INFO     | sum of deviations: -80897205620.50003
[2025-05-29 00:37:27] 2025-05-29 04:37:12,963 | INFO     | mean x: 1748484756.9375
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | mean y: 2206526.382352941
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | -- intersect: 22672177535.69044
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | intersect: 22672177535.69044
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | chi2: 0.8054875369734692
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | -- intersect: 22672177535.69044
[2025-05-29 00:37:27] 2025-05-29 04:37:12,964 | INFO     | current memory leak: -12.97 B/s (using 272 data points, chi2=0.81)
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | ..............................
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . Timing measurements:
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . get job = 0 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . initial setup = 5 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . payload setup = 45 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . stage-in = 0 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . payload execution = 18154 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . stage-out = 3 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | . log creation = 0 s
[2025-05-29 00:37:27] 2025-05-29 04:37:12,965 | INFO     | ..............................
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | 
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | job summary report
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | --------------------------------------------------
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | PanDA job id: 6668688152
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | task id: 44871837
[2025-05-29 00:37:27] 2025-05-29 04:37:13,062 | INFO     | errors: (none)
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | pilot state: finished 
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | transexitcode: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | exeerrorcode: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | exeerrordiag: 
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | exitcode: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | exitmsg: OK
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | cpuconsumptiontime: 49138 s
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | nevents: 400
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | neventsw: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | pid: 2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | pgrp: 2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | corecount: 9
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | event service: False
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | sizes: {0: 2405063, 1: 2405262, 12: 2405262, 23: 2405290, 30: 2405524, 34: 2405552, 18203: 2437650, 18207: 2446647, 18232: 2446761}
[2025-05-29 00:37:27] 2025-05-29 04:37:13,063 | INFO     | --------------------------------------------------
[2025-05-29 00:37:27] 2025-05-29 04:37:13,064 | INFO     | 
[2025-05-29 00:37:27] 2025-05-29 04:37:13,064 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-29 00:37:27] 2025-05-29 04:37:13,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | job 6668688152 has completed (purged errors)
[2025-05-29 00:37:27] 2025-05-29 04:37:13,209 | INFO     | overall cleanup function is called
[2025-05-29 00:37:27] 2025-05-29 04:37:14,247 | INFO     | --- collectZombieJob: --- 10, [2603684]
[2025-05-29 00:37:27] 2025-05-29 04:37:14,251 | INFO     | zombie collector waiting for pid 2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:14,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 00:37:27] 2025-05-29 04:37:14,251 | INFO     | collected zombie processes
[2025-05-29 00:37:27] 2025-05-29 04:37:14,252 | INFO     | will attempt to kill all subprocesses of pid=2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:16,436 | INFO     | process IDs to be killed: [2603684] (in reverse order)
[2025-05-29 00:37:27] 2025-05-29 04:37:16,701 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 00:37:27] 2025-05-29 04:37:16,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 00:37:27] 2025-05-29 04:37:16,795 | INFO     | did not find any defunct processes belonging to 2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:16,873 | INFO     | did not find any defunct processes belonging to 2603684
[2025-05-29 00:37:27] 2025-05-29 04:37:16,873 | INFO     | ready for new job
[2025-05-29 00:37:27] 2025-05-29 04:37:16,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 00:37:27] 2025-05-29 04:37:16,909 | INFO     | **************************************
[2025-05-29 00:37:27] 2025-05-29 04:37:16,910 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 00:37:27] 2025-05-29 04:37:16,910 | INFO     | **************************************
[2025-05-29 00:37:27] 2025-05-29 04:37:16,910 | INFO     | 
[2025-05-29 00:37:27] 2025-05-29 04:37:16,912 | INFO     | architecture information:
[2025-05-29 00:37:27] 2025-05-29 04:37:16,951 | INFO     | executing command: cat /etc/os-release
[2025-05-29 00:37:27] 2025-05-29 04:37:17,067 | INFO     | cat /etc/os-release:
[2025-05-29 00:37:27] NAME="CentOS Linux"
[2025-05-29 00:37:27] VERSION="7 (Core)"
[2025-05-29 00:37:27] ID="centos"
[2025-05-29 00:37:27] ID_LIKE="rhel fedora"
[2025-05-29 00:37:27] VERSION_ID="7"
[2025-05-29 00:37:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 00:37:27] ANSI_COLOR="0;31"
[2025-05-29 00:37:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 00:37:27] HOME_URL="https://www.centos.org/"
[2025-05-29 00:37:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 00:37:27] 
[2025-05-29 00:37:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 00:37:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 00:37:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 00:37:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 00:37:27] 
[2025-05-29 00:37:27] 2025-05-29 04:37:17,067 | INFO     | **************************************
[2025-05-29 00:37:27] 2025-05-29 04:37:17,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-29 00:37:27] 2025-05-29 04:37:17,713 | INFO     | sufficient remaining disk space (74180460544 B)
[2025-05-29 00:37:27] 2025-05-29 04:37:17,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 00:37:27] 2025-05-29 04:37:17,714 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 00:37:27] 2025-05-29 04:37:17,714 | INFO     | update_server=False
[2025-05-29 00:37:27] 2025-05-29 04:37:17,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 00:37:27] 2025-05-29 04:37:17,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 00:37:27] 2025-05-29 04:37:17,727 | INFO     | aborting loop
[2025-05-29 00:37:27] 2025-05-29 04:37:17,729 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 00:37:27] 2025-05-29 04:37:17,729 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 00:37:27] 2025-05-29 04:37:17,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 00:37:27] 2025-05-29 04:37:17,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 00:37:27] 2025-05-29 04:37:17,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 00:37:27] 2025-05-29 04:37:17,854 | INFO     | all data control threads have been joined
[2025-05-29 00:37:27] 2025-05-29 04:37:18,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 00:37:27] 2025-05-29 04:37:18,720 | INFO     | [job] retrieve thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:18,733 | INFO     | [job] job monitor thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:18,786 | INFO     | [payload] failed_post thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:18,860 | INFO     | [data] control thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:18,881 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:18,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 00:37:27] 2025-05-29 04:37:18,965 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,130 | INFO     | [job] queue monitor thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,139 | INFO     | all payload control threads have been joined
[2025-05-29 00:37:27] 2025-05-29 04:37:19,227 | INFO     | [payload] validate_post thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,234 | INFO     | [job] validate thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,251 | INFO     | all job control threads have been joined
[2025-05-29 00:37:27] 2025-05-29 04:37:19,539 | INFO     | [data] copytool_in thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,730 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:19,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:20,158 | INFO     | [payload] control thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:20,261 | INFO     | [job] control thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:20,916 | INFO     | [data] copytool_out thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:21,752 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 00:37:27] 2025-05-29 04:37:22,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560610944832)>', '<ExcThread(monitor, started 140559826011904)>']
[2025-05-29 00:37:27] 2025-05-29 04:37:22,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 00:37:27] 2025-05-29 04:37:22,762 | INFO     | [monitor] control thread has ended
[2025-05-29 00:37:27] 2025-05-29 04:37:27,149 | INFO     | all workflow threads have been joined
[2025-05-29 00:37:27] 2025-05-29 04:37:27,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 00:37:27] 2025-05-29 04:37:27,149 | INFO     | traces error code: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:27,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 00:37:27] 2025-05-29 04:37:27,396 [wrapper] ==== pilot stdout END ====
[2025-05-29 00:37:27] 2025-05-29 04:37:27,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 00:37:27] 2025-05-29 04:37:27,468 [wrapper] pilotpid: 2593916
[2025-05-29 00:37:27] 2025-05-29 04:37:27,480 [wrapper] Pilot exit status: 0
[2025-05-29 00:37:27] 2025-05-29 04:37:27,497 [wrapper] pandaids: 6668688152
[2025-05-29 00:37:27] 2025-05-29 04:37:27,565 [wrapper] cleanup supervisor_pilot 3658345 2593917
[2025-05-29 00:37:27] 2025-05-29 04:37:27,569 [wrapper] Test setup, not cleaning
[2025-05-29 00:37:27] 2025-05-29 04:37:27,572 [wrapper] apfmon messages muted
[2025-05-29 00:37:27] 2025-05-29 04:37:27,575 [wrapper] ==== wrapper stdout END ====
[2025-05-29 00:37:27] 2025-05-29 04:37:27,577 [wrapper] ==== wrapper stderr END ====
[2025-05-29 00:37:27]  *** Error codes and diagnostics ***
[2025-05-29 00:37:27]     "exeErrorCode": 0,
[2025-05-29 00:37:27]     "exeErrorDiag": "",
[2025-05-29 00:37:27]     "pilotErrorCode": 0,
[2025-05-29 00:37:27]     "pilotErrorDiag": "",
[2025-05-29 00:37:27]  *** Listing of results directory ***
[2025-05-29 00:37:27] total 417624
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-05-29 00:37:27] -rwx------. 1 boincer umatlas     37140 May 28 12:10 runpilot2-wrapper.sh
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:10 queuedata.json
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas       100 May 28 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 00:37:27] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 19:31 run_atlas
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas       105 May 28 19:31 job.xml
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas 225028242 May 28 19:31 EVNT.44871834._003382.pool.root.1
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas     15093 May 28 19:31 start_atlas.sh
[2025-05-29 00:37:27] drwxrwx--x. 2 boincer umatlas      4096 May 28 19:31 shared
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas    508878 May 28 19:31 input.tar.gz
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas         0 May 28 19:31 boinc_lockfile
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas      2559 May 28 19:31 pandaJob.out
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas    993733 May 28 19:32 agis_schedconf.cvmfs.json
[2025-05-29 00:37:27] drwx------. 4 boincer umatlas      4096 May 28 19:32 pilot3
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas      6841 May 29 00:31 init_data.xml
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas 194922636 May 29 00:35 HITS.44871837._086840.pool.root.1
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas       531 May 29 00:36 boinc_task_state.xml
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas        95 May 29 00:36 pilot_heartbeat.json
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas      1042 May 29 00:36 memory_monitor_summary.json
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas   1603667 May 29 00:36 agis_ddmendpoints.agis.ALL.json
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas    443721 May 29 00:36 log.44871837._086840.job.log.tgz.1
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas      7727 May 29 00:37 heartbeat.json
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas        28 May 29 00:37 wrapper_checkpoint.txt
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas      4476 May 29 00:37 pilotlog.txt
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas   1482619 May 29 00:37 log.44871837._086840.job.log.1
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas       357 May 29 00:37 output.list
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas       620 May 29 00:37 runtime_log
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas   1945600 May 29 00:37 result.tar.gz
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas      8665 May 29 00:37 runtime_log.err
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas       659 May 29 00:37 iDMMDmcXYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfYcKDm4bz28m.diag
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas      8192 May 29 00:37 boinc_mmap_file
[2025-05-29 00:37:27] -rw-r--r--. 1 boincer umatlas     21142 May 29 00:37 stderr.txt
[2025-05-29 00:37:27] HITS file was successfully produced:
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas 194922636 May 29 00:35 shared/HITS.pool.root.1
[2025-05-29 00:37:27]  *** Contents of shared directory: ***
[2025-05-29 00:37:27] total 412536
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas 225028242 May 28 19:31 ATLAS.root_0
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas     15093 May 28 19:31 start_atlas.sh
[2025-05-29 00:37:27] -rw-r--r--. 2 boincer umatlas    508878 May 28 19:31 input.tar.gz
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas 194922636 May 29 00:35 HITS.pool.root.1
[2025-05-29 00:37:27] -rw-------. 1 boincer umatlas   1945600 May 29 00:37 result.tar.gz
00:37:49 (2589565): run_atlas exited; CPU time 49644.605773
00:37:49 (2589565): called boinc_finish(0)

</stderr_txt>
]]>

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