Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:14 (18437): wrapper (7.7.26015): starting
09:35:14 (18437): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 09:35:14] Arguments: --nthreads 8
[2025-05-29 09:35:14] Threads: 8
[2025-05-29 09:35:14] Checking for CVMFS
[2025-05-29 09:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 09:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 09:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 09:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 09:35:15] 2.11.2.0 27995 24293 94200 146547 0 18 22962857 25165824 4636 130560 0 13290671 99.812 14495678 1753 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 09:35:15] CVMFS is ok
[2025-05-29 09:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 09:35:15] Checking for apptainer binary...
[2025-05-29 09:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 09:35:15] Running /usr/bin/apptainer --version
[2025-05-29 09:35:16] apptainer version 1.3.2-1.el7
[2025-05-29 09:35:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 10:05:41] cg-vwn460.simple-grid.lan
[2025-05-29 10:05:41] apptainer works
[2025-05-29 10:05:41] Set ATHENA_PROC_NUMBER=8
[2025-05-29 10:05:41] Set ATHENA_CORE_NUMBER=8
[2025-05-29 10:05:42] Starting ATLAS job with PandaID=6668688108
[2025-05-29 10:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 15:12:05]  *** The last 200 lines of the pilot log: ***
[2025-05-29 15:12:05] 2025-05-29 13:08:26,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 15:12:05] 2025-05-29 13:08:26,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 15:12:05] 2025-05-29 13:08:26,144 | INFO     | fitting pss+swap vs Time
[2025-05-29 15:12:05] 2025-05-29 13:08:26,145 | INFO     | sum of square deviations: 7330250928.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,148 | INFO     | sum of deviations: 142597346376.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,148 | INFO     | mean x: 1748515327.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,148 | INFO     | mean y: 2434000.8292682925
[2025-05-29 15:12:05] 2025-05-29 13:08:26,148 | INFO     | -- intersect: -34011905777.849026
[2025-05-29 15:12:05] 2025-05-29 13:08:26,149 | INFO     | intersect: -34011905777.849026
[2025-05-29 15:12:05] 2025-05-29 13:08:26,149 | INFO     | chi2: 7.44226486481943
[2025-05-29 15:12:05] 2025-05-29 13:08:26,150 | INFO     | sum of square deviations: 6953769450.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,152 | INFO     | sum of deviations: 158891653321.99994
[2025-05-29 15:12:05] 2025-05-29 13:08:26,152 | INFO     | mean x: 1748515174.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,153 | INFO     | mean y: 2440492.0283687944
[2025-05-29 15:12:05] 2025-05-29 13:08:26,153 | INFO     | -- intersect: -39950633723.70274
[2025-05-29 15:12:05] 2025-05-29 13:08:26,153 | INFO     | intersect: -39950633723.70274
[2025-05-29 15:12:05] 2025-05-29 13:08:26,153 | INFO     | chi2: 6.7200257944700885
[2025-05-29 15:12:05] 2025-05-29 13:08:26,153 | INFO     | current chi2=6.7200257944700885 (change=9.704560150277116 %)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,154 | INFO     | right removable region: 281
[2025-05-29 15:12:05] 2025-05-29 13:08:26,154 | INFO     | sum of square deviations: 6953769450.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,157 | INFO     | sum of deviations: 42012201057.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,157 | INFO     | mean x: 1748515479.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,157 | INFO     | mean y: 2474723.6063829786
[2025-05-29 15:12:05] 2025-05-29 13:08:26,157 | INFO     | -- intersect: -10561433729.185802
[2025-05-29 15:12:05] 2025-05-29 13:08:26,157 | INFO     | intersect: -10561433729.185802
[2025-05-29 15:12:05] 2025-05-29 13:08:26,158 | INFO     | chi2: 2.5446880546209973
[2025-05-29 15:12:05] 2025-05-29 13:08:26,158 | INFO     | current chi2=2.5446880546209973 (change=65.80761232175337 %)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,158 | INFO     | sum of square deviations: 6590404498.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,161 | INFO     | sum of deviations: -13985484701.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,161 | INFO     | mean x: 1748515632.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,161 | INFO     | mean y: 2498121.7436823105
[2025-05-29 15:12:05] 2025-05-29 13:08:26,161 | INFO     | -- intersect: 3713019779.1345735
[2025-05-29 15:12:05] 2025-05-29 13:08:26,162 | INFO     | intersect: 3713019779.1345735
[2025-05-29 15:12:05] 2025-05-29 13:08:26,162 | INFO     | chi2: 0.8526796503644049
[2025-05-29 15:12:05] 2025-05-29 13:08:26,162 | INFO     | current chi2=0.8526796503644049 (change=66.49178083671235 %)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,163 | INFO     | sum of square deviations: 6239923508.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,165 | INFO     | sum of deviations: -14395227648.499998
[2025-05-29 15:12:05] 2025-05-29 13:08:26,165 | INFO     | mean x: 1748515784.5
[2025-05-29 15:12:05] 2025-05-29 13:08:26,165 | INFO     | mean y: 2498267.4963235296
[2025-05-29 15:12:05] 2025-05-29 13:08:26,166 | INFO     | -- intersect: 4036246875.568694
[2025-05-29 15:12:05] 2025-05-29 13:08:26,166 | INFO     | intersect: 4036246875.568694
[2025-05-29 15:12:05] 2025-05-29 13:08:26,166 | INFO     | chi2: 0.8265296383248245
[2025-05-29 15:12:05] 2025-05-29 13:08:26,166 | INFO     | current chi2=0.8265296383248245 (change=3.0668038141176184 %)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,166 | INFO     | left removable region: 30
[2025-05-29 15:12:05] 2025-05-29 13:08:26,167 | INFO     | sum of square deviations: 4903347750.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,169 | INFO     | sum of deviations: 6263997219.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,169 | INFO     | mean x: 1748516059.0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,169 | INFO     | mean y: 2505205.621513944
[2025-05-29 15:12:05] 2025-05-29 13:08:26,169 | INFO     | -- intersect: -2231213528.880407
[2025-05-29 15:12:05] 2025-05-29 13:08:26,170 | INFO     | intersect: -2231213528.880407
[2025-05-29 15:12:05] 2025-05-29 13:08:26,170 | INFO     | chi2: 0.0009925478703625985
[2025-05-29 15:12:05] 2025-05-29 13:08:26,170 | INFO     | -- intersect: -2231213528.880407
[2025-05-29 15:12:05] 2025-05-29 13:08:26,170 | INFO     | current memory leak: 1.28 B/s (using 251 data points, chi2=0.00)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,171 | INFO     | ..............................
[2025-05-29 15:12:05] 2025-05-29 13:08:26,171 | INFO     | . Timing measurements:
[2025-05-29 15:12:05] 2025-05-29 13:08:26,171 | INFO     | . get job = 0 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,171 | INFO     | . initial setup = 10 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | . payload setup = 156 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | . stage-in = 0 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | . payload execution = 17603 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | . stage-out = 3 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | . log creation = 1 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,172 | INFO     | ..............................
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | 
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | job summary report
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | --------------------------------------------------
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | PanDA job id: 6668688108
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | task id: 44871837
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | errors: (none)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | pilot state: finished 
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | transexitcode: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | exeerrorcode: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | exeerrordiag: 
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | exitcode: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | exitmsg: OK
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | cpuconsumptiontime: 66083 s
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | nevents: 400
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | neventsw: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | pid: 17420
[2025-05-29 15:12:05] 2025-05-29 13:08:26,442 | INFO     | pgrp: 17420
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | corecount: 8
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | event service: False
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | sizes: {0: 2405007, 1: 2405262, 12: 2405262, 23: 2405290, 33: 2405318, 44: 2405374, 55: 2405530, 65: 2405558, 76: 2405586, 83: 2405848, 87: 2405904, 17763: 2437388
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | --------------------------------------------------
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | 
[2025-05-29 15:12:05] 2025-05-29 13:08:26,443 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-05-29 15:12:05] 2025-05-29 13:08:26,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 15:12:05] 2025-05-29 13:08:26,723 | INFO     | job 6668688108 has completed (purged errors)
[2025-05-29 15:12:05] 2025-05-29 13:08:26,723 | INFO     | overall cleanup function is called
[2025-05-29 15:12:05] 2025-05-29 13:08:27,732 | INFO     | --- collectZombieJob: --- 10, [17420]
[2025-05-29 15:12:05] 2025-05-29 13:08:27,732 | INFO     | zombie collector waiting for pid 17420
[2025-05-29 15:12:05] 2025-05-29 13:08:27,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 15:12:05] 2025-05-29 13:08:27,732 | INFO     | collected zombie processes
[2025-05-29 15:12:05] 2025-05-29 13:08:27,732 | INFO     | will attempt to kill all subprocesses of pid=17420
[2025-05-29 15:12:05] 2025-05-29 13:08:27,862 | INFO     | process IDs to be killed: [17420] (in reverse order)
[2025-05-29 15:12:05] 2025-05-29 13:08:28,087 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 15:12:05] 2025-05-29 13:08:28,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 15:12:05] 2025-05-29 13:08:28,091 | INFO     | did not find any defunct processes belonging to 17420
[2025-05-29 15:12:05] 2025-05-29 13:08:28,096 | INFO     | did not find any defunct processes belonging to 17420
[2025-05-29 15:12:05] 2025-05-29 13:08:28,096 | INFO     | ready for new job
[2025-05-29 15:12:05] 2025-05-29 13:08:28,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 15:12:05] 2025-05-29 13:08:28,099 | INFO     | **************************************
[2025-05-29 15:12:05] 2025-05-29 13:08:28,099 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 15:12:05] 2025-05-29 13:08:28,099 | INFO     | **************************************
[2025-05-29 15:12:05] 2025-05-29 13:08:28,099 | INFO     | 
[2025-05-29 15:12:05] 2025-05-29 13:08:28,100 | INFO     | pilot is running in a VM
[2025-05-29 15:12:05] 2025-05-29 13:08:28,100 | INFO     | architecture information:
[2025-05-29 15:12:05] 2025-05-29 13:08:28,100 | INFO     | executing command: cat /etc/os-release
[2025-05-29 15:12:05] 2025-05-29 13:08:28,313 | INFO     | cat /etc/os-release:
[2025-05-29 15:12:05] NAME="CentOS Linux"
[2025-05-29 15:12:05] VERSION="7 (Core)"
[2025-05-29 15:12:05] ID="centos"
[2025-05-29 15:12:05] ID_LIKE="rhel fedora"
[2025-05-29 15:12:05] VERSION_ID="7"
[2025-05-29 15:12:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 15:12:05] ANSI_COLOR="0;31"
[2025-05-29 15:12:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 15:12:05] HOME_URL="https://www.centos.org/"
[2025-05-29 15:12:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 15:12:05] 
[2025-05-29 15:12:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 15:12:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 15:12:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 15:12:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 15:12:05] 
[2025-05-29 15:12:05] 2025-05-29 13:08:28,313 | INFO     | **************************************
[2025-05-29 15:12:05] 2025-05-29 13:08:28,647 | INFO     | PID=8844 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-29 15:12:05] 2025-05-29 13:08:28,647 | INFO     | .. there are 9 such processes running
[2025-05-29 15:12:05] 2025-05-29 13:08:28,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-05-29 15:12:05] 2025-05-29 13:08:29,081 | INFO     | sufficient remaining disk space (496369664000 B)
[2025-05-29 15:12:05] 2025-05-29 13:08:29,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 15:12:05] 2025-05-29 13:08:29,082 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 15:12:05] 2025-05-29 13:08:29,082 | INFO     | update_server=False
[2025-05-29 15:12:05] 2025-05-29 13:08:29,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 15:12:05] 2025-05-29 13:08:29,082 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 15:12:05] 2025-05-29 13:08:29,083 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 15:12:05] 2025-05-29 13:08:29,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 15:12:05] 2025-05-29 13:08:29,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 15:12:05] 2025-05-29 13:08:29,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 15:12:05] 2025-05-29 13:08:29,084 | INFO     | aborting loop
[2025-05-29 15:12:05] 2025-05-29 13:08:29,434 | INFO     | all payload control threads have been joined
[2025-05-29 15:12:05] 2025-05-29 13:08:29,552 | INFO     | all job control threads have been joined
[2025-05-29 15:12:05] 2025-05-29 13:08:29,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 15:12:05] 2025-05-29 13:08:30,088 | INFO     | [job] retrieve thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,090 | INFO     | [job] job monitor thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,186 | INFO     | all data control threads have been joined
[2025-05-29 15:12:05] 2025-05-29 13:08:30,215 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,345 | INFO     | [payload] failed_post thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 15:12:05] 2025-05-29 13:08:30,440 | INFO     | [payload] control thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,559 | INFO     | [job] control thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,639 | INFO     | [job] validate thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:30,886 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:31,029 | INFO     | [data] copytool_in thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:31,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:31,192 | INFO     | [data] control thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:31,201 | INFO     | [payload] validate_post thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:31,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 15:12:05] 2025-05-29 13:08:31,349 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:32,337 | INFO     | [job] queue monitor thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:32,419 | INFO     | [data] copytool_out thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:33,606 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 15:12:05] 2025-05-29 13:08:33,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092673779520)>', '<ExcThread(monitor, started 140091951404800)>']
[2025-05-29 15:12:05] 2025-05-29 13:08:34,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 15:12:05] 2025-05-29 13:08:34,116 | INFO     | [monitor] control thread has ended
[2025-05-29 15:12:05] 2025-05-29 13:08:37,559 [wrapper] supervise_pilot (15 min periods counter: 21)
[2025-05-29 15:12:05] 2025-05-29 13:08:38,902 | INFO     | all workflow threads have been joined
[2025-05-29 15:12:05] 2025-05-29 13:08:38,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 15:12:05] 2025-05-29 13:08:38,902 | INFO     | traces error code: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:38,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 15:12:05] 2025-05-29 13:08:39,159 [wrapper] ==== pilot stdout END ====
[2025-05-29 15:12:05] 2025-05-29 13:08:39,190 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 15:12:05] 2025-05-29 13:08:39,261 [wrapper] pilotpid: 8844
[2025-05-29 15:12:05] 2025-05-29 13:08:39,336 [wrapper] Pilot exit status: 0
[2025-05-29 15:12:05] 2025-05-29 13:08:39,627 [wrapper] pandaids: 6668688108
[2025-05-29 15:12:05] 2025-05-29 13:08:40,081 [wrapper] cleanup supervisor_pilot 24030 8845
[2025-05-29 15:12:05] 2025-05-29 13:08:40,095 [wrapper] Test setup, not cleaning
[2025-05-29 15:12:05] 2025-05-29 13:08:40,146 [wrapper] apfmon messages muted
[2025-05-29 15:12:05] 2025-05-29 13:08:40,231 [wrapper] ==== wrapper stdout END ====
[2025-05-29 15:12:05] 2025-05-29 13:08:40,323 [wrapper] ==== wrapper stderr END ====
[2025-05-29 15:12:05]  *** Error codes and diagnostics ***
[2025-05-29 15:12:05]     "exeErrorCode": 0,
[2025-05-29 15:12:05]     "exeErrorDiag": "",
[2025-05-29 15:12:05]     "pilotErrorCode": 0,
[2025-05-29 15:12:05]     "pilotErrorDiag": "",
[2025-05-29 15:12:05]  *** Listing of results directory ***
[2025-05-29 15:12:05] total 424676
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc    495897 May 28 17:15 pilot3.tar.gz
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc      5111 May 28 18:08 queuedata.json
[2025-05-29 15:12:05] -rwx------. 1 boinc boinc     37140 May 28 18:09 runpilot2-wrapper.sh
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc       100 May 29 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 15:12:05] -rwxr-xr-x. 1 boinc boinc      7986 May 29 09:35 run_atlas
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc       105 May 29 09:35 job.xml
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc      6372 May 29 09:35 init_data.xml
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc 226113912 May 29 09:35 EVNT.44871834._003380.pool.root.1
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc     15093 May 29 09:35 start_atlas.sh
[2025-05-29 15:12:05] drwxrwx--x. 2 boinc boinc        68 May 29 09:35 shared
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc    508881 May 29 09:35 input.tar.gz
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc         0 May 29 09:35 boinc_lockfile
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc      2559 May 29 10:05 pandaJob.out
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc    993147 May 29 10:08 agis_schedconf.cvmfs.json
[2025-05-29 15:12:05] drwx------. 4 boinc boinc      4096 May 29 10:08 pilot3
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc 200987855 May 29 15:07 HITS.44871837._086796.pool.root.1
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc       530 May 29 15:07 boinc_task_state.xml
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc      1019 May 29 15:07 memory_monitor_summary.json
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc   1603667 May 29 15:07 agis_ddmendpoints.agis.ALL.json
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc    432081 May 29 15:07 log.44871837._086796.job.log.tgz.1
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc        95 May 29 15:08 pilot_heartbeat.json
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc      7692 May 29 15:08 heartbeat.json
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc      4930 May 29 15:08 pilotlog.txt
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc   1538760 May 29 15:08 log.44871837._086796.job.log.1
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc       357 May 29 15:08 output.list
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc       620 May 29 15:08 runtime_log
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc   1986560 May 29 15:08 result.tar.gz
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc      8659 May 29 15:08 runtime_log.err
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc       657 May 29 15:08 IIlKDmLWYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLYcKDmSV8BKo.diag
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc      8192 May 29 15:12 boinc_mmap_file
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc        28 May 29 15:12 wrapper_checkpoint.txt
[2025-05-29 15:12:05] -rw-r--r--. 1 boinc boinc     20626 May 29 15:12 stderr.txt
[2025-05-29 15:12:05] HITS file was successfully produced:
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc 200987855 May 29 15:07 shared/HITS.pool.root.1
[2025-05-29 15:12:05]  *** Contents of shared directory: ***
[2025-05-29 15:12:05] total 419552
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc 226113912 May 29 09:35 ATLAS.root_0
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc     15093 May 29 09:35 start_atlas.sh
[2025-05-29 15:12:05] -rw-r--r--. 2 boinc boinc    508881 May 29 09:35 input.tar.gz
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc 200987855 May 29 15:07 HITS.pool.root.1
[2025-05-29 15:12:05] -rw-------. 1 boinc boinc   1986560 May 29 15:08 result.tar.gz
15:12:07 (18437): run_atlas exited; CPU time 66308.488791
15:12:07 (18437): called boinc_finish(0)

</stderr_txt>
]]>

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