Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:03:00 (21053): wrapper (7.7.26015): starting
11:03:00 (21053): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 11:03:00] Arguments: --nthreads 8
[2025-05-29 11:03:00] Threads: 8
[2025-05-29 11:03:00] Checking for CVMFS
[2025-05-29 11:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 11:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 11:03:01] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 11:03:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 11:03:02] 2.11.2.0 1855 24369 95468 146550 3 14 21933488 25165824 4639 130560 0 13700884 99.812 14518272 1817 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 11:03:02] CVMFS is ok
[2025-05-29 11:03:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 11:03:02] Checking for apptainer binary...
[2025-05-29 11:03:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 11:03:02] Running /usr/bin/apptainer --version
[2025-05-29 11:03:02] apptainer version 1.3.2-1.el7
[2025-05-29 11:03:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 11:03:14] cg-vwn348.simple-grid.lan
[2025-05-29 11:03:14] apptainer works
[2025-05-29 11:03:14] Set ATHENA_PROC_NUMBER=8
[2025-05-29 11:03:14] Set ATHENA_CORE_NUMBER=8
[2025-05-29 11:03:14] Starting ATLAS job with PandaID=6668687881
[2025-05-29 11:03:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 16:41:16]  *** The last 200 lines of the pilot log: ***
[2025-05-29 16:41:16] 2025-05-29 14:33:29,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 16:41:16] 2025-05-29 14:33:29,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 16:41:16] 2025-05-29 14:33:29,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 16:41:16] 2025-05-29 14:33:29,701 | INFO     | fitting pss+swap vs Time
[2025-05-29 16:41:16] 2025-05-29 14:33:29,701 | INFO     | sum of square deviations: 9417545878.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,705 | INFO     | sum of deviations: 166742753756.49997
[2025-05-29 16:41:16] 2025-05-29 14:33:29,705 | INFO     | mean x: 1748519579.5
[2025-05-29 16:41:16] 2025-05-29 14:33:29,705 | INFO     | mean y: 2441539.7852564105
[2025-05-29 16:41:16] 2025-05-29 14:33:29,705 | INFO     | -- intersect: -30956045252.838085
[2025-05-29 16:41:16] 2025-05-29 14:33:29,705 | INFO     | intersect: -30956045252.838085
[2025-05-29 16:41:16] 2025-05-29 14:33:29,706 | INFO     | chi2: 6.8676209092128895
[2025-05-29 16:41:16] 2025-05-29 14:33:29,706 | INFO     | sum of square deviations: 8971993338.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,709 | INFO     | sum of deviations: 185542140961.99997
[2025-05-29 16:41:16] 2025-05-29 14:33:29,709 | INFO     | mean x: 1748519427.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,710 | INFO     | mean y: 2447877.2182410425
[2025-05-29 16:41:16] 2025-05-29 14:33:29,710 | INFO     | -- intersect: -36157190876.09683
[2025-05-29 16:41:16] 2025-05-29 14:33:29,710 | INFO     | intersect: -36157190876.09683
[2025-05-29 16:41:16] 2025-05-29 14:33:29,710 | INFO     | chi2: 6.0543878934251545
[2025-05-29 16:41:16] 2025-05-29 14:33:29,710 | INFO     | current chi2=6.0543878934251545 (change=11.841553669579893 %)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,718 | INFO     | right removable region: 306
[2025-05-29 16:41:16] 2025-05-29 14:33:29,718 | INFO     | sum of square deviations: 8971993338.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,721 | INFO     | sum of deviations: 61105998662.99999
[2025-05-29 16:41:16] 2025-05-29 14:33:29,722 | INFO     | mean x: 1748519732.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,722 | INFO     | mean y: 2477671.7719869707
[2025-05-29 16:41:16] 2025-05-29 14:33:29,722 | INFO     | -- intersect: -11906252125.572975
[2025-05-29 16:41:16] 2025-05-29 14:33:29,722 | INFO     | intersect: -11906252125.572975
[2025-05-29 16:41:16] 2025-05-29 14:33:29,722 | INFO     | chi2: 2.4038818531588846
[2025-05-29 16:41:16] 2025-05-29 14:33:29,723 | INFO     | current chi2=2.4038818531588846 (change=64.99687613895394 %)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,723 | INFO     | sum of square deviations: 8540720135.5
[2025-05-29 16:41:16] 2025-05-29 14:33:29,726 | INFO     | sum of deviations: 3649049432.499981
[2025-05-29 16:41:16] 2025-05-29 14:33:29,726 | INFO     | mean x: 1748519884.5
[2025-05-29 16:41:16] 2025-05-29 14:33:29,726 | INFO     | mean y: 2497915.5993377483
[2025-05-29 16:41:16] 2025-05-29 14:33:29,726 | INFO     | -- intersect: -744562682.4559722
[2025-05-29 16:41:16] 2025-05-29 14:33:29,726 | INFO     | intersect: -744562682.4559722
[2025-05-29 16:41:16] 2025-05-29 14:33:29,727 | INFO     | chi2: 0.9825297804238544
[2025-05-29 16:41:16] 2025-05-29 14:33:29,727 | INFO     | current chi2=0.9825297804238544 (change=59.12736813031243 %)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,728 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,730 | INFO     | sum of deviations: -13235598220.000002
[2025-05-29 16:41:16] 2025-05-29 14:33:29,731 | INFO     | mean x: 1748520037.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,731 | INFO     | mean y: 2504088.4242424243
[2025-05-29 16:41:16] 2025-05-29 14:33:29,731 | INFO     | -- intersect: 2851365615.400086
[2025-05-29 16:41:16] 2025-05-29 14:33:29,731 | INFO     | intersect: 2851365615.400086
[2025-05-29 16:41:16] 2025-05-29 14:33:29,731 | INFO     | chi2: 0.8766860857289389
[2025-05-29 16:41:16] 2025-05-29 14:33:29,732 | INFO     | current chi2=0.8766860857289389 (change=10.772568608480801 %)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,732 | INFO     | left removable region: 30
[2025-05-29 16:41:16] 2025-05-29 14:33:29,732 | INFO     | sum of square deviations: 6519285025.0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,734 | INFO     | sum of deviations: 5193187572.5
[2025-05-29 16:41:16] 2025-05-29 14:33:29,735 | INFO     | mean x: 1748520311.5
[2025-05-29 16:41:16] 2025-05-29 14:33:29,735 | INFO     | mean y: 2512685.612318841
[2025-05-29 16:41:16] 2025-05-29 14:33:29,735 | INFO     | -- intersect: -1390338511.585587
[2025-05-29 16:41:16] 2025-05-29 14:33:29,735 | INFO     | intersect: -1390338511.585587
[2025-05-29 16:41:16] 2025-05-29 14:33:29,735 | INFO     | chi2: 0.005405990360325688
[2025-05-29 16:41:16] 2025-05-29 14:33:29,736 | INFO     | -- intersect: -1390338511.585587
[2025-05-29 16:41:16] 2025-05-29 14:33:29,736 | INFO     | current memory leak: 0.80 B/s (using 276 data points, chi2=0.01)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | ..............................
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . Timing measurements:
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . get job = 0 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . initial setup = 10 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . payload setup = 156 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . stage-in = 0 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . payload execution = 19167 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . stage-out = 4 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | . log creation = 1 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,737 | INFO     | ..............................
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | 
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | job summary report
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | --------------------------------------------------
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | PanDA job id: 6668687881
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | task id: 44871837
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | errors: (none)
[2025-05-29 16:41:16] 2025-05-29 14:33:29,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | pilot state: finished 
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | transexitcode: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | exeerrorcode: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | exeerrordiag: 
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | exitcode: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | exitmsg: OK
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | cpuconsumptiontime: 71291 s
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | nevents: 400
[2025-05-29 16:41:16] 2025-05-29 14:33:29,883 | INFO     | neventsw: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | pid: 3103
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | pgrp: 3103
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | corecount: 8
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | event service: False
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | sizes: {0: 2405008, 1: 2405263, 12: 2405263, 23: 2405291, 34: 2405319, 44: 2405347, 55: 2405503, 66: 2405531, 76: 2405559, 87: 2405615, 93: 2405849, 98: 2406157, 1
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | --------------------------------------------------
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | 
[2025-05-29 16:41:16] 2025-05-29 14:33:29,884 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-29 16:41:16] 2025-05-29 14:33:30,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 16:41:16] 2025-05-29 14:33:30,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 16:41:16] 2025-05-29 14:33:30,346 | INFO     | job 6668687881 has completed (purged errors)
[2025-05-29 16:41:16] 2025-05-29 14:33:30,346 | INFO     | overall cleanup function is called
[2025-05-29 16:41:16] 2025-05-29 14:33:30,826 | INFO     | PID=28906 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-29 16:41:16] 2025-05-29 14:33:30,826 | INFO     | .. there are 9 such processes running
[2025-05-29 16:41:16] 2025-05-29 14:33:31,355 | INFO     | --- collectZombieJob: --- 10, [3103]
[2025-05-29 16:41:16] 2025-05-29 14:33:31,355 | INFO     | zombie collector waiting for pid 3103
[2025-05-29 16:41:16] 2025-05-29 14:33:31,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 16:41:16] 2025-05-29 14:33:31,355 | INFO     | collected zombie processes
[2025-05-29 16:41:16] 2025-05-29 14:33:31,355 | INFO     | will attempt to kill all subprocesses of pid=3103
[2025-05-29 16:41:16] 2025-05-29 14:33:31,499 | INFO     | process IDs to be killed: [3103] (in reverse order)
[2025-05-29 16:41:16] 2025-05-29 14:33:32,560 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 16:41:16] 2025-05-29 14:33:32,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 16:41:16] 2025-05-29 14:33:32,564 | INFO     | did not find any defunct processes belonging to 3103
[2025-05-29 16:41:16] 2025-05-29 14:33:32,567 | INFO     | did not find any defunct processes belonging to 3103
[2025-05-29 16:41:16] 2025-05-29 14:33:32,568 | INFO     | ready for new job
[2025-05-29 16:41:16] 2025-05-29 14:33:32,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 16:41:16] 2025-05-29 14:33:32,573 | INFO     | **************************************
[2025-05-29 16:41:16] 2025-05-29 14:33:32,573 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 16:41:16] 2025-05-29 14:33:32,573 | INFO     | **************************************
[2025-05-29 16:41:16] 2025-05-29 14:33:32,574 | INFO     | 
[2025-05-29 16:41:16] 2025-05-29 14:33:32,574 | INFO     | pilot is running in a VM
[2025-05-29 16:41:16] 2025-05-29 14:33:32,574 | INFO     | architecture information:
[2025-05-29 16:41:16] 2025-05-29 14:33:32,590 | INFO     | executing command: cat /etc/os-release
[2025-05-29 16:41:16] 2025-05-29 14:33:32,884 | INFO     | cat /etc/os-release:
[2025-05-29 16:41:16] NAME="CentOS Linux"
[2025-05-29 16:41:16] VERSION="7 (Core)"
[2025-05-29 16:41:16] ID="centos"
[2025-05-29 16:41:16] ID_LIKE="rhel fedora"
[2025-05-29 16:41:16] VERSION_ID="7"
[2025-05-29 16:41:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 16:41:16] ANSI_COLOR="0;31"
[2025-05-29 16:41:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 16:41:16] HOME_URL="https://www.centos.org/"
[2025-05-29 16:41:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 16:41:16] 
[2025-05-29 16:41:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 16:41:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 16:41:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 16:41:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 16:41:16] 
[2025-05-29 16:41:16] 2025-05-29 14:33:32,884 | INFO     | **************************************
[2025-05-29 16:41:16] 2025-05-29 14:33:33,388 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-29 16:41:16] 2025-05-29 14:33:33,662 | INFO     | sufficient remaining disk space (496077111296 B)
[2025-05-29 16:41:16] 2025-05-29 14:33:33,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 16:41:16] 2025-05-29 14:33:33,662 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 16:41:16] 2025-05-29 14:33:33,662 | INFO     | update_server=False
[2025-05-29 16:41:16] 2025-05-29 14:33:33,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 16:41:16] 2025-05-29 14:33:33,664 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 16:41:16] 2025-05-29 14:33:33,664 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 16:41:16] 2025-05-29 14:33:33,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 16:41:16] 2025-05-29 14:33:33,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 16:41:16] 2025-05-29 14:33:33,745 | INFO     | all payload control threads have been joined
[2025-05-29 16:41:16] 2025-05-29 14:33:34,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 16:41:16] 2025-05-29 14:33:34,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 16:41:16] 2025-05-29 14:33:34,417 | INFO     | all data control threads have been joined
[2025-05-29 16:41:16] 2025-05-29 14:33:34,563 | INFO     | all job control threads have been joined
[2025-05-29 16:41:16] 2025-05-29 14:33:34,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:41:16] 2025-05-29 14:33:34,647 | INFO     | aborting loop
[2025-05-29 16:41:16] 2025-05-29 14:33:34,669 | INFO     | [job] retrieve thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:34,751 | INFO     | [payload] control thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:34,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:41:16] 2025-05-29 14:33:34,974 | INFO     | [payload] validate_post thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:34,991 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,380 | INFO     | [payload] failed_post thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,422 | INFO     | [data] control thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,569 | INFO     | [job] control thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,653 | INFO     | [job] job monitor thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,880 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:35,904 | INFO     | [job] queue monitor thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:36,015 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:36,147 | INFO     | [job] validate thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:36,147 | INFO     | [data] copytool_in thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:36,226 | INFO     | [data] copytool_out thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:38,098 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 16:41:16] 2025-05-29 14:33:38,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951904274240)>', '<ExcThread(monitor, started 139951098291968)>']
[2025-05-29 16:41:16] 2025-05-29 14:33:38,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 16:41:16] 2025-05-29 14:33:38,693 | INFO     | [monitor] control thread has ended
[2025-05-29 16:41:16] 2025-05-29 14:33:43,533 | INFO     | all workflow threads have been joined
[2025-05-29 16:41:16] 2025-05-29 14:33:43,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 16:41:16] 2025-05-29 14:33:43,533 | INFO     | traces error code: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:43,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 16:41:16] 2025-05-29 14:33:43,755 [wrapper] ==== pilot stdout END ====
[2025-05-29 16:41:16] 2025-05-29 14:33:43,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 16:41:16] 2025-05-29 14:33:43,838 [wrapper] pilotpid: 28906
[2025-05-29 16:41:16] 2025-05-29 14:33:43,883 [wrapper] Pilot exit status: 0
[2025-05-29 16:41:16] 2025-05-29 14:33:44,217 [wrapper] pandaids: 6668687881
[2025-05-29 16:41:16] 2025-05-29 14:33:44,802 [wrapper] cleanup supervisor_pilot 22974 28907
[2025-05-29 16:41:16] 2025-05-29 14:33:44,873 [wrapper] Test setup, not cleaning
[2025-05-29 16:41:16] 2025-05-29 14:33:44,940 [wrapper] apfmon messages muted
[2025-05-29 16:41:16] 2025-05-29 14:33:44,986 [wrapper] ==== wrapper stdout END ====
[2025-05-29 16:41:16] 2025-05-29 14:33:45,017 [wrapper] ==== wrapper stderr END ====
[2025-05-29 16:41:16]  *** Error codes and diagnostics ***
[2025-05-29 16:41:16]     "exeErrorCode": 0,
[2025-05-29 16:41:16]     "exeErrorDiag": "",
[2025-05-29 16:41:16]     "pilotErrorCode": 0,
[2025-05-29 16:41:16]     "pilotErrorDiag": "",
[2025-05-29 16:41:16]  *** Listing of results directory ***
[2025-05-29 16:41:16] total 413832
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc    495897 May 28 17:15 pilot3.tar.gz
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc      5111 May 28 17:59 queuedata.json
[2025-05-29 16:41:16] -rwx------. 1 boinc boinc     37140 May 28 18:00 runpilot2-wrapper.sh
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc       100 May 29 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 16:41:16] -rwxr-xr-x. 1 boinc boinc      7986 May 29 11:02 run_atlas
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc       105 May 29 11:02 job.xml
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc      6372 May 29 11:03 init_data.xml
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc 222632274 May 29 11:03 EVNT.44871834._003372.pool.root.1
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc     15093 May 29 11:03 start_atlas.sh
[2025-05-29 16:41:16] drwxrwx--x. 2 boinc boinc        68 May 29 11:03 shared
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc    508883 May 29 11:03 input.tar.gz
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc         0 May 29 11:03 boinc_lockfile
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc      2559 May 29 11:03 pandaJob.out
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc    993309 May 29 11:06 agis_schedconf.cvmfs.json
[2025-05-29 16:41:16] drwx------. 4 boinc boinc      4096 May 29 11:06 pilot3
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc 193095149 May 29 16:30 HITS.44871837._086593.pool.root.1
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc       531 May 29 16:31 boinc_task_state.xml
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc      1019 May 29 16:31 memory_monitor_summary.json
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc   1603667 May 29 16:31 agis_ddmendpoints.agis.ALL.json
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc    439794 May 29 16:31 log.44871837._086593.job.log.tgz.1
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc        95 May 29 16:33 pilot_heartbeat.json
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc      7710 May 29 16:33 heartbeat.json
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc      4540 May 29 16:33 pilotlog.txt
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc   1660832 May 29 16:33 log.44871837._086593.job.log.1
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc       357 May 29 16:33 output.list
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc       620 May 29 16:33 runtime_log
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc   2119680 May 29 16:33 result.tar.gz
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc       657 May 29 16:33 RwfKDmWNYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCVcKDm19kHMm.diag
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc      8673 May 29 16:33 runtime_log.err
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc      8192 May 29 16:41 boinc_mmap_file
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc        28 May 29 16:41 wrapper_checkpoint.txt
[2025-05-29 16:41:16] -rw-r--r--. 1 boinc boinc     20633 May 29 16:41 stderr.txt
[2025-05-29 16:41:16] HITS file was successfully produced:
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc 193095149 May 29 16:30 shared/HITS.pool.root.1
[2025-05-29 16:41:16]  *** Contents of shared directory: ***
[2025-05-29 16:41:16] total 408576
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc 222632274 May 29 11:03 ATLAS.root_0
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc     15093 May 29 11:03 start_atlas.sh
[2025-05-29 16:41:16] -rw-r--r--. 2 boinc boinc    508883 May 29 11:03 input.tar.gz
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc 193095149 May 29 16:30 HITS.pool.root.1
[2025-05-29 16:41:16] -rw-------. 1 boinc boinc   2119680 May 29 16:33 result.tar.gz
16:41:18 (21053): run_atlas exited; CPU time 71556.019972
16:41:18 (21053): called boinc_finish(0)

</stderr_txt>
]]>

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