Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:15:11 (1052335): wrapper (7.7.26015): starting
09:15:11 (1052335): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 09:15:11] Arguments: --nthreads 4
[2025-06-03 09:15:11] Threads: 4
[2025-06-03 09:15:11] Checking for CVMFS
[2025-06-03 09:15:11] No cvmfs_config command found, will try listing directly
[2025-06-03 09:15:11] CVMFS is ok
[2025-06-03 09:15:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:15:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:15:11] Further information can be found at the LHC@home message board.
[2025-06-03 09:15:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:15:11] Checking for apptainer binary...
[2025-06-03 09:15:11] which: no apptainer in ((null))
[2025-06-03 09:15:11] apptainer is not installed, using version from CVMFS
[2025-06-03 09:15:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:15:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-03 09:15:11] apptainer works
[2025-06-03 09:15:11] Set ATHENA_PROC_NUMBER=4
[2025-06-03 09:15:11] Set ATHENA_CORE_NUMBER=4
[2025-06-03 09:15:11] Starting ATLAS job with PandaID=6668687847
[2025-06-03 09:15:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:54:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:54:46] 2025-06-03 10:52:58,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:54:46] 2025-06-03 10:52:58,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:54:46] 2025-06-03 10:52:58,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:54:46] 2025-06-03 10:52:58,680 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:54:46] 2025-06-03 10:52:58,680 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | sum of deviations: 23391761713.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | mean x: 1748941443.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | mean y: 2299393.7056074766
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | -- intersect: -13460269526.16279
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | intersect: -13460269526.16279
[2025-06-03 12:54:46] 2025-06-03 10:52:58,682 | INFO     | chi2: 2.404640116742714
[2025-06-03 12:54:46] 2025-06-03 10:52:58,683 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,684 | INFO     | sum of deviations: 35886792392.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,684 | INFO     | mean x: 1748941291.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,685 | INFO     | mean y: 2308365.4401913877
[2025-06-03 12:54:46] 2025-06-03 10:52:58,685 | INFO     | -- intersect: -22169572362.748806
[2025-06-03 12:54:46] 2025-06-03 10:52:58,685 | INFO     | intersect: -22169572362.748806
[2025-06-03 12:54:46] 2025-06-03 10:52:58,685 | INFO     | chi2: 1.6118926611379292
[2025-06-03 12:54:46] 2025-06-03 10:52:58,685 | INFO     | current chi2=1.6118926611379292 (change=32.967405396139995 %)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,686 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,687 | INFO     | sum of deviations: 34733842524.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,687 | INFO     | mean x: 1748941138.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,687 | INFO     | mean y: 2307478.8284313725
[2025-06-03 12:54:46] 2025-06-03 10:52:58,687 | INFO     | -- intersect: -23074170929.06403
[2025-06-03 12:54:46] 2025-06-03 10:52:58,687 | INFO     | intersect: -23074170929.06403
[2025-06-03 12:54:46] 2025-06-03 10:52:58,688 | INFO     | chi2: 1.6128319117519654
[2025-06-03 12:54:46] 2025-06-03 10:52:58,688 | INFO     | current chi2=1.6128319117519654 (change=-0.05827004717380756 %)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,688 | INFO     | right removable region: 203
[2025-06-03 12:54:46] 2025-06-03 10:52:58,688 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,689 | INFO     | sum of deviations: -10397782572.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | mean x: 1748941596.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | mean y: 2323927.2775119618
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | -- intersect: 6426370766.283661
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | intersect: 6426370766.283661
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | chi2: 0.8235806302109506
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | current chi2=0.8235806302109506 (change=65.75035804831538 %)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,690 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | sum of deviations: -10216729173.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | mean x: 1748941748.5
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | mean y: 2323772.7598039214
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | -- intersect: 6790119054.446493
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | intersect: 6790119054.446493
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | chi2: 0.8210273013075816
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | current chi2=0.8210273013075816 (change=0.310027799307884 %)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,692 | INFO     | left removable region: 20
[2025-06-03 12:54:46] 2025-06-03 10:52:58,693 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | sum of deviations: 4212640358.0000005
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | mean x: 1748941718.0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | mean y: 2331521.464480874
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | -- intersect: -3874804133.8092704
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | intersect: -3874804133.8092704
[2025-06-03 12:54:46] 2025-06-03 10:52:58,694 | INFO     | chi2: 0.00016889008843510908
[2025-06-03 12:54:46] 2025-06-03 10:52:58,695 | INFO     | -- intersect: -3874804133.8092704
[2025-06-03 12:54:46] 2025-06-03 10:52:58,695 | INFO     | current memory leak: 2.22 B/s (using 183 data points, chi2=0.00)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,695 | INFO     | ..............................
[2025-06-03 12:54:46] 2025-06-03 10:52:58,695 | INFO     | . Timing measurements:
[2025-06-03 12:54:46] 2025-06-03 10:52:58,695 | INFO     | . get job = 0 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . initial setup = 1 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . payload setup = 5 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . stage-in = 0 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . payload execution = 13023 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . stage-out = 1 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | . log creation = 0 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,696 | INFO     | ..............................
[2025-06-03 12:54:46] 2025-06-03 10:52:58,791 | INFO     | 
[2025-06-03 12:54:46] 2025-06-03 10:52:58,791 | INFO     | job summary report
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | --------------------------------------------------
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | PanDA job id: 6668687847
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | task id: 44871837
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | errors: (none)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | pilot state: finished 
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | transexitcode: 0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | exeerrorcode: 0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | exeerrordiag: 
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | exitcode: 0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | exitmsg: OK
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | cpuconsumptiontime: 50400 s
[2025-06-03 12:54:46] 2025-06-03 10:52:58,792 | INFO     | nevents: 400
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | neventsw: 0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | pid: 1063470
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | pgrp: 1063470
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | corecount: 4
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | event service: False
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | sizes: {0: 2405245, 4: 2405451, 11: 2405479, 13033: 2435220, 13035: 2444183, 13038: 2444239, 13043: 2444537}
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | --------------------------------------------------
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | 
[2025-06-03 12:54:46] 2025-06-03 10:52:58,793 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-03 12:54:46] 2025-06-03 10:52:58,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:54:46] 2025-06-03 10:52:58,815 | INFO     | job 6668687847 has completed (purged errors)
[2025-06-03 12:54:46] 2025-06-03 10:52:58,815 | INFO     | overall cleanup function is called
[2025-06-03 12:54:46] 2025-06-03 10:52:59,822 | INFO     | --- collectZombieJob: --- 10, [1063470]
[2025-06-03 12:54:46] 2025-06-03 10:52:59,823 | INFO     | zombie collector waiting for pid 1063470
[2025-06-03 12:54:46] 2025-06-03 10:52:59,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:54:46] 2025-06-03 10:52:59,823 | INFO     | collected zombie processes
[2025-06-03 12:54:46] 2025-06-03 10:52:59,823 | INFO     | will attempt to kill all subprocesses of pid=1063470
[2025-06-03 12:54:46] 2025-06-03 10:53:00,192 | INFO     | process IDs to be killed: [1063470] (in reverse order)
[2025-06-03 12:54:46] 2025-06-03 10:53:00,308 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:54:46] 2025-06-03 10:53:00,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:54:46] 2025-06-03 10:53:00,320 | INFO     | did not find any defunct processes belonging to 1063470
[2025-06-03 12:54:46] 2025-06-03 10:53:00,332 | INFO     | did not find any defunct processes belonging to 1063470
[2025-06-03 12:54:46] 2025-06-03 10:53:00,332 | INFO     | ready for new job
[2025-06-03 12:54:46] 2025-06-03 10:53:00,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:54:46] 2025-06-03 10:53:00,335 | INFO     | **************************************
[2025-06-03 12:54:46] 2025-06-03 10:53:00,335 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:54:46] 2025-06-03 10:53:00,335 | INFO     | **************************************
[2025-06-03 12:54:46] 2025-06-03 10:53:00,335 | INFO     | 
[2025-06-03 12:54:46] 2025-06-03 10:53:00,339 | INFO     | architecture information:
[2025-06-03 12:54:46] 2025-06-03 10:53:00,340 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:54:46] 2025-06-03 10:53:00,355 | INFO     | cat /etc/os-release:
[2025-06-03 12:54:46] NAME="CentOS Linux"
[2025-06-03 12:54:46] VERSION="7 (Core)"
[2025-06-03 12:54:46] ID="centos"
[2025-06-03 12:54:46] ID_LIKE="rhel fedora"
[2025-06-03 12:54:46] VERSION_ID="7"
[2025-06-03 12:54:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:54:46] ANSI_COLOR="0;31"
[2025-06-03 12:54:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:54:46] HOME_URL="https://www.centos.org/"
[2025-06-03 12:54:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:54:46] 
[2025-06-03 12:54:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:54:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:54:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:54:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:54:46] 
[2025-06-03 12:54:46] 2025-06-03 10:53:00,356 | INFO     | **************************************
[2025-06-03 12:54:46] 2025-06-03 10:53:00,859 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-03 12:54:46] 2025-06-03 10:53:00,876 | INFO     | sufficient remaining disk space (643522625536 B)
[2025-06-03 12:54:46] 2025-06-03 10:53:00,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:54:46] 2025-06-03 10:53:00,877 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:54:46] 2025-06-03 10:53:00,877 | INFO     | update_server=False
[2025-06-03 12:54:46] 2025-06-03 10:53:00,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:54:46] 2025-06-03 10:53:00,877 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:54:46] 2025-06-03 10:53:00,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:54:46] 2025-06-03 10:53:00,878 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:54:46] 2025-06-03 10:53:00,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:54:46] 2025-06-03 10:53:00,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:54:46] 2025-06-03 10:53:01,010 | INFO     | all data control threads have been joined
[2025-06-03 12:54:46] 2025-06-03 10:53:01,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:54:46] 2025-06-03 10:53:01,074 | INFO     | all payload control threads have been joined
[2025-06-03 12:54:46] 2025-06-03 10:53:01,075 | INFO     | all job control threads have been joined
[2025-06-03 12:54:46] 2025-06-03 10:53:01,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 12:54:46] 2025-06-03 10:53:01,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 12:54:46] 2025-06-03 10:53:01,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:54:46] 2025-06-03 10:53:01,126 | INFO     | will abort loop
[2025-06-03 12:54:46] 2025-06-03 10:53:01,882 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:01,956 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,015 | INFO     | [data] control thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,080 | INFO     | [payload] control thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,081 | INFO     | [job] control thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,132 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,732 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,763 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,894 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:02,955 | INFO     | [job] validate thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:03,047 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:03,102 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:03,250 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:03,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:54:46] 2025-06-03 10:53:04,805 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:04,884 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:10,942 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:54:46] 2025-06-03 10:53:11,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:54:46] 2025-06-03 10:53:13,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23225613498176)>', '<ExcThread(monitor, started 23224901433088)>']
[2025-06-03 12:54:46] 2025-06-03 10:53:13,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:54:46] 2025-06-03 10:53:13,937 | INFO     | [monitor] control thread has ended
[2025-06-03 12:54:46] 2025-06-03 10:53:18,329 | INFO     | all workflow threads have been joined
[2025-06-03 12:54:46] 2025-06-03 10:53:18,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:54:46] 2025-06-03 10:53:18,330 | INFO     | traces error code: 0
[2025-06-03 12:54:46] 2025-06-03 10:53:18,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:54:46] 2025-06-03 10:53:18,493 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:54:46] 2025-06-03 10:53:18,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:54:46] 2025-06-03 10:53:18,499 [wrapper] pilotpid: 1056027
[2025-06-03 12:54:46] 2025-06-03 10:53:18,503 [wrapper] Pilot exit status: 0
[2025-06-03 12:54:46] 2025-06-03 10:53:18,514 [wrapper] pandaids: 6668687847
[2025-06-03 12:54:46] 2025-06-03 10:53:18,584 [wrapper] cleanup supervisor_pilot 1444085 1056028
[2025-06-03 12:54:46] 2025-06-03 10:53:18,588 [wrapper] Test setup, not cleaning
[2025-06-03 12:54:46] 2025-06-03 10:53:18,591 [wrapper] apfmon messages muted
[2025-06-03 12:54:46] 2025-06-03 10:53:18,594 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:54:46] 2025-06-03 10:53:18,597 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:54:46]  *** Error codes and diagnostics ***
[2025-06-03 12:54:46]     "exeErrorCode": 0,
[2025-06-03 12:54:46]     "exeErrorDiag": "",
[2025-06-03 12:54:46]     "pilotErrorCode": 0,
[2025-06-03 12:54:46]     "pilotErrorDiag": "",
[2025-06-03 12:54:46]  *** Listing of results directory ***
[2025-06-03 12:54:46] total 413840
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc    495897 May 28 17:15 pilot3.tar.gz
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc      5111 May 28 17:57 queuedata.json
[2025-06-03 12:54:46] -rwx------ 1 boinc boinc     37140 May 28 17:58 runpilot2-wrapper.sh
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc       100 Jun  3 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:54:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 09:15 run_atlas
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc       105 Jun  3 09:15 job.xml
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc 225722918 Jun  3 09:15 EVNT.44871834._003371.pool.root.1
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc      6635 Jun  3 09:15 init_data.xml
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:15 start_atlas.sh
[2025-06-03 12:54:46] drwxrwx--x 2 boinc boinc      4096 Jun  3 09:15 shared
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc    508885 Jun  3 09:15 input.tar.gz
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc         0 Jun  3 09:15 boinc_lockfile
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc      2559 Jun  3 09:15 pandaJob.out
[2025-06-03 12:54:46] -rw------- 1 boinc boinc    986901 Jun  3 09:15 agis_schedconf.cvmfs.json
[2025-06-03 12:54:46] drwx------ 4 boinc boinc      4096 Jun  3 09:15 pilot3
[2025-06-03 12:54:46] -rw------- 1 boinc boinc 191107640 Jun  3 12:52 HITS.44871837._086559.pool.root.1
[2025-06-03 12:54:46] -rw------- 1 boinc boinc        95 Jun  3 12:52 pilot_heartbeat.json
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc       528 Jun  3 12:52 boinc_task_state.xml
[2025-06-03 12:54:46] -rw------- 1 boinc boinc      1036 Jun  3 12:52 memory_monitor_summary.json
[2025-06-03 12:54:46] -rw------- 1 boinc boinc   1603667 Jun  3 12:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:54:46] -rw------- 1 boinc boinc    325314 Jun  3 12:52 log.44871837._086559.job.log.tgz.1
[2025-06-03 12:54:46] -rw------- 1 boinc boinc      7728 Jun  3 12:52 heartbeat.json
[2025-06-03 12:54:46] -rw------- 1 boinc boinc      4744 Jun  3 12:53 pilotlog.txt
[2025-06-03 12:54:46] -rw------- 1 boinc boinc   1226448 Jun  3 12:53 log.44871837._086559.job.log.1
[2025-06-03 12:54:46] -rw------- 1 boinc boinc       357 Jun  3 12:53 output.list
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc       620 Jun  3 12:53 runtime_log
[2025-06-03 12:54:46] -rw------- 1 boinc boinc   1566720 Jun  3 12:53 result.tar.gz
[2025-06-03 12:54:46] -rw------- 1 boinc boinc       664 Jun  3 12:53 vi5MDmPLYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUcKDmJmZ9rm.diag
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc      9026 Jun  3 12:53 runtime_log.err
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc        26 Jun  3 12:54 wrapper_checkpoint.txt
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc      8192 Jun  3 12:54 boinc_mmap_file
[2025-06-03 12:54:46] -rw-r--r-- 1 boinc boinc     20585 Jun  3 12:54 stderr.txt
[2025-06-03 12:54:46] HITS file was successfully produced:
[2025-06-03 12:54:46] -rw------- 1 boinc boinc 191107640 Jun  3 12:52 shared/HITS.pool.root.1
[2025-06-03 12:54:46]  *** Contents of shared directory: ***
[2025-06-03 12:54:46] total 409124
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc 225722918 Jun  3 09:15 ATLAS.root_0
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:15 start_atlas.sh
[2025-06-03 12:54:46] -rw-r--r-- 2 boinc boinc    508885 Jun  3 09:15 input.tar.gz
[2025-06-03 12:54:46] -rw------- 1 boinc boinc 191107640 Jun  3 12:52 HITS.pool.root.1
[2025-06-03 12:54:46] -rw------- 1 boinc boinc   1566720 Jun  3 12:53 result.tar.gz
12:54:48 (1052335): run_atlas exited; CPU time 50923.718126
12:54:48 (1052335): called boinc_finish(0)

</stderr_txt>
]]>

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