Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:37:14 (2785061): wrapper (7.7.26015): starting
15:37:14 (2785061): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:37:14] Arguments: --nthreads 4
[2025-06-04 15:37:14] Threads: 4
[2025-06-04 15:37:14] Checking for CVMFS
[2025-06-04 15:37:14] No cvmfs_config command found, will try listing directly
[2025-06-04 15:37:14] CVMFS is ok
[2025-06-04 15:37:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:37:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:37:14] Further information can be found at the LHC@home message board.
[2025-06-04 15:37:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:37:14] Checking for apptainer binary...
[2025-06-04 15:37:14] which: no apptainer in ((null))
[2025-06-04 15:37:14] apptainer is not installed, using version from CVMFS
[2025-06-04 15:37:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:37:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-04 15:37:14] apptainer works
[2025-06-04 15:37:14] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:37:14] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:37:14] Starting ATLAS job with PandaID=6668443444
[2025-06-04 15:37:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:48:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:48:13] 2025-06-04 16:47:46,860 | WARNING  | process 2796820 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 18:48:13] 2025-06-04 16:47:46,860 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6668443444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:48:13] 2025-06-04 16:47:47,538 | INFO     | number of running child processes to parent process 2796820: 1
[2025-06-04 18:48:13] 2025-06-04 16:47:47,539 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:48:13] 2025-06-04 16:47:50,041 | INFO     | monitor loop #790: job 0:6668443444 is in state 'finished'
[2025-06-04 18:48:13] 2025-06-04 16:47:50,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,246 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 18:48:13] 2025-06-04 16:47:51,246 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6668443444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,247 | INFO     | extracted standard info from prmon json
[2025-06-04 18:48:13] 2025-06-04 16:47:51,248 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:48:13] 2025-06-04 16:47:51,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:48:13] 2025-06-04 16:47:51,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:48:13] 2025-06-04 16:47:51,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:48:13] 2025-06-04 16:47:51,253 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:48:13] 2025-06-04 16:47:51,253 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,254 | INFO     | sum of deviations: -2726918624.000002
[2025-06-04 18:48:13] 2025-06-04 16:47:51,254 | INFO     | mean x: 1749049955.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,254 | INFO     | mean y: 2342582.320855615
[2025-06-04 18:48:13] 2025-06-04 16:47:51,255 | INFO     | -- intersect: 2354593072.334085
[2025-06-04 18:48:13] 2025-06-04 16:47:51,255 | INFO     | intersect: 2354593072.334085
[2025-06-04 18:48:13] 2025-06-04 16:47:51,255 | INFO     | chi2: 1.5568218349668752
[2025-06-04 18:48:13] 2025-06-04 16:47:51,255 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 18:48:13] 2025-06-04 16:47:51,256 | INFO     | sum of deviations: -2541206502.9999976
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | mean x: 1749049802.5
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | mean y: 2342761.285714286
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | -- intersect: 2380073417.729526
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | intersect: 2380073417.729526
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | chi2: 1.5567514079402942
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | current chi2=1.5567514079402942 (change=0.004523769194340577 %)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,257 | INFO     | right removable region: 181
[2025-06-04 18:48:13] 2025-06-04 16:47:51,258 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | sum of deviations: -27227424054.000008
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | mean x: 1749050107.5
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | mean y: 2365834.5494505493
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | -- intersect: 25478253796.45269
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | intersect: 25478253796.45269
[2025-06-04 18:48:13] 2025-06-04 16:47:51,259 | INFO     | chi2: 0.12106171382601186
[2025-06-04 18:48:13] 2025-06-04 16:47:51,260 | INFO     | current chi2=0.12106171382601186 (change=92.22379137375165 %)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,260 | INFO     | sum of square deviations: 1719429448.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | sum of deviations: -21730610903.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | mean x: 1749050260.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | mean y: 2360219.293785311
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | -- intersect: 22107326895.339096
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | intersect: 22107326895.339096
[2025-06-04 18:48:13] 2025-06-04 16:47:51,261 | INFO     | chi2: 0.10506981106759404
[2025-06-04 18:48:13] 2025-06-04 16:47:51,262 | INFO     | current chi2=0.10506981106759404 (change=13.20971119027866 %)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,262 | INFO     | left removable region: 20
[2025-06-04 18:48:13] 2025-06-04 16:47:51,262 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | sum of deviations: -7103044838.000006
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | mean x: 1749050382.0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | mean y: 2344566.4223602484
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | -- intersect: 9603148012.517788
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | intersect: 9603148012.517788
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | chi2: 0.016222719604918015
[2025-06-04 18:48:13] 2025-06-04 16:47:51,263 | INFO     | -- intersect: 9603148012.517788
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | current memory leak: -5.49 B/s (using 161 data points, chi2=0.02)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | ..............................
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . Timing measurements:
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . get job = 0 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . initial setup = 1 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . payload setup = 9 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . stage-in = 0 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,264 | INFO     | . payload execution = 11383 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,265 | INFO     | . stage-out = 1 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,265 | INFO     | . log creation = 0 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,265 | INFO     | ..............................
[2025-06-04 18:48:13] 2025-06-04 16:47:51,425 | INFO     | 
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | job summary report
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | --------------------------------------------------
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | PanDA job id: 6668443444
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | task id: 44871837
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | errors: (none)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | pilot state: finished 
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | transexitcode: 0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | exeerrorcode: 0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | exeerrordiag: 
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | exitcode: 0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | exitmsg: OK
[2025-06-04 18:48:13] 2025-06-04 16:47:51,428 | INFO     | cpuconsumptiontime: 43576 s
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | nevents: 400
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | neventsw: 0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | pid: 2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | pgrp: 2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | corecount: 4
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | event service: False
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | sizes: {0: 2397403, 1: 2397431, 7: 2397637, 11: 2397665, 11396: 2427271, 11398: 2436234, 11399: 2436418, 11406: 2436588}
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | --------------------------------------------------
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | 
[2025-06-04 18:48:13] 2025-06-04 16:47:51,429 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-06-04 18:48:13] 2025-06-04 16:47:51,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | job 6668443444 has completed (purged errors)
[2025-06-04 18:48:13] 2025-06-04 16:47:51,458 | INFO     | overall cleanup function is called
[2025-06-04 18:48:13] 2025-06-04 16:47:52,467 | INFO     | --- collectZombieJob: --- 10, [2796820]
[2025-06-04 18:48:13] 2025-06-04 16:47:52,468 | INFO     | zombie collector waiting for pid 2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:52,468 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:48:13] 2025-06-04 16:47:52,468 | INFO     | collected zombie processes
[2025-06-04 18:48:13] 2025-06-04 16:47:52,468 | INFO     | will attempt to kill all subprocesses of pid=2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:53,088 | INFO     | process IDs to be killed: [2796820] (in reverse order)
[2025-06-04 18:48:13] 2025-06-04 16:47:53,313 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:48:13] 2025-06-04 16:47:53,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:48:13] 2025-06-04 16:47:53,338 | INFO     | did not find any defunct processes belonging to 2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:53,358 | INFO     | did not find any defunct processes belonging to 2796820
[2025-06-04 18:48:13] 2025-06-04 16:47:53,358 | INFO     | ready for new job
[2025-06-04 18:48:13] 2025-06-04 16:47:53,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:48:13] 2025-06-04 16:47:53,360 | INFO     | **************************************
[2025-06-04 18:48:13] 2025-06-04 16:47:53,360 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:48:13] 2025-06-04 16:47:53,360 | INFO     | **************************************
[2025-06-04 18:48:13] 2025-06-04 16:47:53,360 | INFO     | 
[2025-06-04 18:48:13] 2025-06-04 16:47:53,369 | INFO     | architecture information:
[2025-06-04 18:48:13] 2025-06-04 16:47:53,369 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:48:13] 2025-06-04 16:47:53,386 | INFO     | cat /etc/os-release:
[2025-06-04 18:48:13] NAME="CentOS Linux"
[2025-06-04 18:48:13] VERSION="7 (Core)"
[2025-06-04 18:48:13] ID="centos"
[2025-06-04 18:48:13] ID_LIKE="rhel fedora"
[2025-06-04 18:48:13] VERSION_ID="7"
[2025-06-04 18:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:48:13] ANSI_COLOR="0;31"
[2025-06-04 18:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:48:13] HOME_URL="https://www.centos.org/"
[2025-06-04 18:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:48:13] 
[2025-06-04 18:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:48:13] 
[2025-06-04 18:48:13] 2025-06-04 16:47:53,387 | INFO     | **************************************
[2025-06-04 18:48:13] 2025-06-04 16:47:53,890 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-06-04 18:48:13] 2025-06-04 16:47:53,916 | INFO     | sufficient remaining disk space (3242703454208 B)
[2025-06-04 18:48:13] 2025-06-04 16:47:53,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:48:13] 2025-06-04 16:47:53,916 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:48:13] 2025-06-04 16:47:53,916 | INFO     | update_server=False
[2025-06-04 18:48:13] 2025-06-04 16:47:53,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:48:13] 2025-06-04 16:47:53,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:48:13] 2025-06-04 16:47:53,917 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:48:13] 2025-06-04 16:47:53,917 | INFO     | aborting loop
[2025-06-04 18:48:13] 2025-06-04 16:47:53,917 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:48:13] 2025-06-04 16:47:53,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:48:13] 2025-06-04 16:47:53,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:48:13] 2025-06-04 16:47:54,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:48:13] 2025-06-04 16:47:54,570 | INFO     | all data control threads have been joined
[2025-06-04 18:48:13] 2025-06-04 16:47:54,608 | INFO     | all job control threads have been joined
[2025-06-04 18:48:13] 2025-06-04 16:47:54,650 | INFO     | all payload control threads have been joined
[2025-06-04 18:48:13] 2025-06-04 16:47:54,921 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:54,922 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:54,946 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:48:13] 2025-06-04 16:47:55,520 | INFO     | [job] validate thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,576 | INFO     | [data] control thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,614 | INFO     | [job] control thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,655 | INFO     | [payload] control thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,729 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,944 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:55,951 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:56,072 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:56,336 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:56,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:48:13] 2025-06-04 16:47:56,505 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:57,375 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:47:59,493 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:48:04,874 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:48:13] 2025-06-04 16:48:05,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:48:13] 2025-06-04 16:48:07,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22956084455232)>', '<ExcThread(monitor, started 22955840984832)>']
[2025-06-04 18:48:13] 2025-06-04 16:48:07,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:48:13] 2025-06-04 16:48:07,985 | INFO     | [monitor] control thread has ended
[2025-06-04 18:48:13] 2025-06-04 16:48:12,835 | INFO     | all workflow threads have been joined
[2025-06-04 18:48:13] 2025-06-04 16:48:12,835 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:48:13] 2025-06-04 16:48:12,836 | INFO     | traces error code: 0
[2025-06-04 18:48:13] 2025-06-04 16:48:12,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:48:13] 2025-06-04 16:48:12,966 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:48:13] 2025-06-04 16:48:12,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:48:13] 2025-06-04 16:48:12,973 [wrapper] pilotpid: 2788970
[2025-06-04 18:48:13] 2025-06-04 16:48:12,977 [wrapper] Pilot exit status: 0
[2025-06-04 18:48:13] 2025-06-04 16:48:12,992 [wrapper] pandaids: 6668443444
[2025-06-04 18:48:13] 2025-06-04 16:48:13,153 [wrapper] cleanup supervisor_pilot 3337889 2788971
[2025-06-04 18:48:13] 2025-06-04 16:48:13,157 [wrapper] Test setup, not cleaning
[2025-06-04 18:48:13] 2025-06-04 16:48:13,161 [wrapper] apfmon messages muted
[2025-06-04 18:48:13] 2025-06-04 16:48:13,165 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:48:13] 2025-06-04 16:48:13,169 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:48:13]  *** Error codes and diagnostics ***
[2025-06-04 18:48:13]     "exeErrorCode": 0,
[2025-06-04 18:48:13]     "exeErrorDiag": "",
[2025-06-04 18:48:13]     "pilotErrorCode": 0,
[2025-06-04 18:48:13]     "pilotErrorDiag": "",
[2025-06-04 18:48:13]  *** Listing of results directory ***
[2025-06-04 18:48:13] total 411804
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc    495897 May 28 15:01 pilot3.tar.gz
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc      5111 May 28 15:13 queuedata.json
[2025-06-04 18:48:13] -rwx------ 1 boinc boinc     37140 May 28 15:14 runpilot2-wrapper.sh
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:48:13] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:37 run_atlas
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:37 job.xml
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc      6685 Jun  4 15:37 init_data.xml
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc 223336259 Jun  4 15:37 EVNT.44871834._003308.pool.root.1
[2025-06-04 18:48:13] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:37 shared
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:37 input.tar.gz
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:37 start_atlas.sh
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:37 boinc_lockfile
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc      2559 Jun  4 15:37 pandaJob.out
[2025-06-04 18:48:13] -rw------- 1 boinc boinc    986819 Jun  4 15:37 agis_schedconf.cvmfs.json
[2025-06-04 18:48:13] drwx------ 4 boinc boinc      4096 Jun  4 15:37 pilot3
[2025-06-04 18:48:13] -rw------- 1 boinc boinc        95 Jun  4 18:47 pilot_heartbeat.json
[2025-06-04 18:48:13] -rw------- 1 boinc boinc 191766995 Jun  4 18:47 HITS.44871837._084787.pool.root.1
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc       530 Jun  4 18:47 boinc_task_state.xml
[2025-06-04 18:48:13] -rw------- 1 boinc boinc      1031 Jun  4 18:47 memory_monitor_summary.json
[2025-06-04 18:48:13] -rw------- 1 boinc boinc   1598969 Jun  4 18:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:48:13] -rw------- 1 boinc boinc    317178 Jun  4 18:47 log.44871837._084787.job.log.tgz.1
[2025-06-04 18:48:13] -rw------- 1 boinc boinc      7706 Jun  4 18:47 heartbeat.json
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:48 boinc_mmap_file
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:48 wrapper_checkpoint.txt
[2025-06-04 18:48:13] -rw------- 1 boinc boinc      4559 Jun  4 18:48 pilotlog.txt
[2025-06-04 18:48:13] -rw------- 1 boinc boinc   1060708 Jun  4 18:48 log.44871837._084787.job.log.1
[2025-06-04 18:48:13] -rw------- 1 boinc boinc       357 Jun  4 18:48 output.list
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:48 runtime_log
[2025-06-04 18:48:13] -rw------- 1 boinc boinc   1392640 Jun  4 18:48 result.tar.gz
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc      9026 Jun  4 18:48 runtime_log.err
[2025-06-04 18:48:13] -rw------- 1 boinc boinc       665 Jun  4 18:48 TJTKDmkmVe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDYTKDmgks4tm.diag
[2025-06-04 18:48:13] -rw-r--r-- 1 boinc boinc     20897 Jun  4 18:48 stderr.txt
[2025-06-04 18:48:13] HITS file was successfully produced:
[2025-06-04 18:48:13] -rw------- 1 boinc boinc 191766995 Jun  4 18:47 shared/HITS.pool.root.1
[2025-06-04 18:48:13]  *** Contents of shared directory: ***
[2025-06-04 18:48:13] total 407264
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc 223336259 Jun  4 15:37 ATLAS.root_0
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:37 input.tar.gz
[2025-06-04 18:48:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:37 start_atlas.sh
[2025-06-04 18:48:13] -rw------- 1 boinc boinc 191766995 Jun  4 18:47 HITS.pool.root.1
[2025-06-04 18:48:13] -rw------- 1 boinc boinc   1392640 Jun  4 18:48 result.tar.gz
18:48:14 (2785061): run_atlas exited; CPU time 44256.382161
18:48:14 (2785061): called boinc_finish(0)

</stderr_txt>
]]>

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