Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:29:57 (2430851): wrapper (7.7.26015): starting
14:29:57 (2430851): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 14:29:57] Arguments: --nthreads 12
[2025-05-28 14:29:57] Threads: 12
[2025-05-28 14:29:57] Checking for CVMFS
[2025-05-28 14:29:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 14:29:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 14:29:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 14:29:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 14:29:57] 2.11.5.0 2364443 23527 228136 146532 2 14 37158775 45568001 9164 130560 0 213139594 99.749 168105219 14954 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 14:29:57] CVMFS is ok
[2025-05-28 14:29:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 14:29:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 14:29:57] Further information can be found at the LHC@home message board.
[2025-05-28 14:29:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 14:29:57] Checking for apptainer binary...
[2025-05-28 14:29:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 14:29:57] Running /usr/bin/apptainer --version
[2025-05-28 14:29:57] apptainer version 1.4.0-1.el9
[2025-05-28 14:29:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 14:29:57] wns0043.triumf.lcg
[2025-05-28 14:29:57] apptainer works
[2025-05-28 14:29:57] Set ATHENA_PROC_NUMBER=12
[2025-05-28 14:29:57] Set ATHENA_CORE_NUMBER=12
[2025-05-28 14:29:57] Starting ATLAS job with PandaID=6668788736
[2025-05-28 14:29:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 14:32:58]  *** The last 200 lines of the pilot log: ***
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard info from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | found no stored workdir sizes
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | WARNING  | wrong length of table data, x=[1748467828.0], y=[1204.0] (must be same and length>=4)
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . Timing measurements:
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . get job = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . initial setup = 2 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload setup = 4 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . stage-in = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload execution = 14 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . stage-out = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . log creation = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668788736/pilotlog.txt
[2025-05-28 14:32:58] 2025-05-28 21:32:43,924 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 14:32:58] - Log from pilotlog.txt -
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard info from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | found no stored workdir sizes
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | WARNING  | wrong length of table data, x=[1748467828.0], y=[1204.0] (must be same and length>=4)
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . Timing measurements:
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . get job = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . initial setup = 2 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload setup = 4 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . stage-in = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload execution = 14 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . stage-out = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . log creation = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668788736/pilotlog.txt
[2025-05-28 14:32:58] 2025-05-28 21:32:43,924 | WARNING  | 
[2025-05-28 14:32:58] [begin log extracts]
[2025-05-28 14:32:58] - Log from pilotlog.txt -
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard info from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:32:58] 2025-05-28 21:32:43,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | WARNING  | found no stored workdir sizes
[2025-05-28 14:32:58] 2025-05-28 21:32:43,910 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | WARNING  | wrong length of table data, x=[1748467828.0], y=[1204.0] (must be same and length>=4)
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . Timing measurements:
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . get job = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . initial setup = 2 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload setup = 4 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . stage-in = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,911 | INFO     | . payload execution = 14 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . stage-out = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | . log creation = 0 s
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | ..............................
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 14:32:58] 2025-05-28 21:32:43,912 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668788736/pilotlog.txt
[2025-05-28 14:32:58] [end log extracts]
[2025-05-28 14:32:58] 2025-05-28 21:32:43,924 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 14:32:58] 2025-05-28 21:32:43,925 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 14:32:58] 2025-05-28 21:32:44,277 | INFO     | 
[2025-05-28 14:32:58] 2025-05-28 21:32:44,277 | INFO     | job summary report
[2025-05-28 14:32:58] 2025-05-28 21:32:44,277 | INFO     | --------------------------------------------------
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | PanDA job id: 6668788736
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | task id: 44871837
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 14:30:35,155 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | pilot state: failed 
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | transexitcode: 65
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | exeerrorcode: 65
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | exitcode: 65
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | nevents: 0
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | neventsw: 0
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | pid: 2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | pgrp: 2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | corecount: 12
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | event service: False
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | sizes: {0: 2405004, 1: 2405259, 4: 2405465, 11: 2405493, 22: 2428734, 23: 2432969, 24: 2433125, 144: 2433267}
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | --------------------------------------------------
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | 
[2025-05-28 14:32:58] 2025-05-28 21:32:44,278 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | job 6668788736 has completed (purged errors)
[2025-05-28 14:32:58] 2025-05-28 21:32:44,293 | INFO     | overall cleanup function is called
[2025-05-28 14:32:58] 2025-05-28 21:32:45,299 | INFO     | --- collectZombieJob: --- 10, [2441815]
[2025-05-28 14:32:58] 2025-05-28 21:32:45,299 | INFO     | zombie collector waiting for pid 2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:45,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 14:32:58] 2025-05-28 21:32:45,299 | INFO     | collected zombie processes
[2025-05-28 14:32:58] 2025-05-28 21:32:45,300 | INFO     | will attempt to kill all subprocesses of pid=2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:45,421 | INFO     | process IDs to be killed: [2441815] (in reverse order)
[2025-05-28 14:32:58] 2025-05-28 21:32:45,472 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 14:32:58] 2025-05-28 21:32:45,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 14:32:58] 2025-05-28 21:32:45,478 | INFO     | did not find any defunct processes belonging to 2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:45,484 | INFO     | did not find any defunct processes belonging to 2441815
[2025-05-28 14:32:58] 2025-05-28 21:32:45,484 | INFO     | ready for new job
[2025-05-28 14:32:58] 2025-05-28 21:32:45,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 14:32:58] 2025-05-28 21:32:45,486 | INFO     | **************************************
[2025-05-28 14:32:58] 2025-05-28 21:32:45,486 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 14:32:58] 2025-05-28 21:32:45,487 | INFO     | **************************************
[2025-05-28 14:32:58] 2025-05-28 21:32:45,487 | INFO     | 
[2025-05-28 14:32:58] 2025-05-28 21:32:45,489 | INFO     | architecture information:
[2025-05-28 14:32:58] 2025-05-28 21:32:45,489 | INFO     | executing command: cat /etc/os-release
[2025-05-28 14:32:58] 2025-05-28 21:32:45,501 | INFO     | cat /etc/os-release:
[2025-05-28 14:32:58] NAME="CentOS Linux"
[2025-05-28 14:32:58] VERSION="7 (Core)"
[2025-05-28 14:32:58] ID="centos"
[2025-05-28 14:32:58] ID_LIKE="rhel fedora"
[2025-05-28 14:32:58] VERSION_ID="7"
[2025-05-28 14:32:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 14:32:58] ANSI_COLOR="0;31"
[2025-05-28 14:32:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 14:32:58] HOME_URL="https://www.centos.org/"
[2025-05-28 14:32:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 14:32:58] 
[2025-05-28 14:32:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 14:32:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 14:32:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 14:32:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 14:32:58] 
[2025-05-28 14:32:58] 2025-05-28 21:32:45,501 | INFO     | **************************************
[2025-05-28 14:32:58] 2025-05-28 21:32:46,004 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 14:32:58] 2025-05-28 21:32:46,014 | INFO     | sufficient remaining disk space (2116546461696 B)
[2025-05-28 14:32:58] 2025-05-28 21:32:46,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 14:32:58] 2025-05-28 21:32:46,015 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 14:32:58] 2025-05-28 21:32:46,015 | INFO     | update_server=False
[2025-05-28 14:32:58] 2025-05-28 21:32:46,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 14:32:58] 2025-05-28 21:32:46,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 14:32:58] 2025-05-28 21:32:46,080 | INFO     | all data control threads have been joined
[2025-05-28 14:32:58] 2025-05-28 21:32:46,284 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 14:32:58] 2025-05-28 21:32:46,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 14:32:58] 2025-05-28 21:32:46,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 14:32:58] 2025-05-28 21:32:46,399 | INFO     | all job control threads have been joined
[2025-05-28 14:32:58] 2025-05-28 21:32:46,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:32:58] 2025-05-28 21:32:46,725 | INFO     | aborting loop
[2025-05-28 14:32:58] 2025-05-28 21:32:47,020 | INFO     | [job] retrieve thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,071 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,085 | INFO     | [data] control thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,110 | INFO     | all payload control threads have been joined
[2025-05-28 14:32:58] 2025-05-28 21:32:47,193 | INFO     | [payload] validate_post thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,404 | INFO     | [job] control thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,412 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 14:32:58] 2025-05-28 21:32:47,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,730 | INFO     | [job] job monitor thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:47,824 | INFO     | [payload] failed_post thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,021 | INFO     | [data] copytool_out thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,116 | INFO     | [payload] control thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,320 | INFO     | [job] validate thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,461 | INFO     | [data] copytool_in thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,461 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:48,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:32:58] 2025-05-28 21:32:49,998 | INFO     | [job] queue monitor thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:51,544 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 14:32:58] 2025-05-28 21:32:52,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700167825216)>', '<ExcThread(monitor, started 140699034973952)>']
[2025-05-28 14:32:58] 2025-05-28 21:32:53,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 14:32:58] 2025-05-28 21:32:53,319 | INFO     | [monitor] control thread has ended
[2025-05-28 14:32:58] 2025-05-28 21:32:57,851 | INFO     | all workflow threads have been joined
[2025-05-28 14:32:58] 2025-05-28 21:32:57,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 14:32:58] 2025-05-28 21:32:57,851 | INFO     | traces error code: 0
[2025-05-28 14:32:58] 2025-05-28 21:32:57,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 14:32:58] 2025-05-28 21:32:58,008 [wrapper] ==== pilot stdout END ====
[2025-05-28 14:32:58] 2025-05-28 21:32:58,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 14:32:58] 2025-05-28 21:32:58,013 [wrapper] pilotpid: 2434869
[2025-05-28 14:32:58] 2025-05-28 21:32:58,015 [wrapper] Pilot exit status: 0
[2025-05-28 14:32:58] 2025-05-28 21:32:58,023 [wrapper] pandaids: 6668788736
[2025-05-28 14:32:58] 2025-05-28 21:32:58,055 [wrapper] cleanup supervisor_pilot 2434875 2434870
[2025-05-28 14:32:58] 2025-05-28 21:32:58,057 [wrapper] Test setup, not cleaning
[2025-05-28 14:32:58] 2025-05-28 21:32:58,059 [wrapper] apfmon messages muted
[2025-05-28 14:32:58] 2025-05-28 21:32:58,062 [wrapper] ==== wrapper stdout END ====
[2025-05-28 14:32:58] 2025-05-28 21:32:58,064 [wrapper] ==== wrapper stderr END ====
[2025-05-28 14:32:58]  *** Error codes and diagnostics ***
[2025-05-28 14:32:58]     "exeErrorCode": 65,
[2025-05-28 14:32:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 14:32:58]     "pilotErrorCode": 1305,
[2025-05-28 14:32:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 14:32:58]  *** Listing of results directory ***
[2025-05-28 14:32:58] total 222940
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc    495897 May 28 11:37 pilot3.tar.gz
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc      5111 May 28 11:42 queuedata.json
[2025-05-28 14:32:58] -rwx------. 1 boinc boinc     37140 May 28 11:43 runpilot2-wrapper.sh
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc       100 May 28 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 14:32:58] -rwxr-xr-x. 1 boinc boinc      7986 May 28 14:29 run_atlas
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc       105 May 28 14:29 job.xml
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc      6602 May 28 14:29 init_data.xml
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc 224265634 May 28 14:29 EVNT.44871834._003460.pool.root.1
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc     15093 May 28 14:29 start_atlas.sh
[2025-05-28 14:32:58] drwxrwx--x. 2 boinc boinc      4096 May 28 14:29 shared
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc    508883 May 28 14:29 input.tar.gz
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc         0 May 28 14:29 boinc_lockfile
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc      2559 May 28 14:29 pandaJob.out
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc    993435 May 28 14:30 agis_schedconf.cvmfs.json
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc   1603667 May 28 14:30 agis_ddmendpoints.agis.ALL.json
[2025-05-28 14:32:58] drwx------. 4 boinc boinc      4096 May 28 14:30 pilot3
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc       522 May 28 14:30 boinc_task_state.xml
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc       988 May 28 14:30 memory_monitor_summary.json
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc     20365 May 28 14:30 log.44871837._088862.job.log.tgz.1
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc        95 May 28 14:32 pilot_heartbeat.json
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc      8342 May 28 14:32 heartbeat.json
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc        22 May 28 14:32 wrapper_checkpoint.txt
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc      8192 May 28 14:32 boinc_mmap_file
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc      4352 May 28 14:32 pilotlog.txt
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc     72521 May 28 14:32 log.44871837._088862.job.log.1
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc       188 May 28 14:32 output.list
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc       620 May 28 14:32 runtime_log
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc    112640 May 28 14:32 result.tar.gz
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc      8484 May 28 14:32 runtime_log.err
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc       646 May 28 14:32 koaNDm5uae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIzTKDmGJ8pRn.diag
[2025-05-28 14:32:58] -rw-r--r--. 1 boinc boinc     21449 May 28 14:32 stderr.txt
[2025-05-28 14:32:58] No HITS result produced
[2025-05-28 14:32:58]  *** Contents of shared directory: ***
[2025-05-28 14:32:58] total 219640
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc 224265634 May 28 14:29 ATLAS.root_0
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc     15093 May 28 14:29 start_atlas.sh
[2025-05-28 14:32:58] -rw-r--r--. 2 boinc boinc    508883 May 28 14:29 input.tar.gz
[2025-05-28 14:32:58] -rw-------. 1 boinc boinc    112640 May 28 14:32 result.tar.gz
14:32:59 (2430851): run_atlas exited; CPU time 17.993939
14:32:59 (2430851): called boinc_finish(0)

</stderr_txt>
]]>

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