Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:59:49 (27197): wrapper (7.7.26015): starting
08:59:49 (27197): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 08:59:49] Arguments: --nthreads 8
[2025-05-29 08:59:49] Threads: 8
[2025-05-29 08:59:49] Checking for CVMFS
[2025-05-29 08:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 08:59:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 08:59:51] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 08:59:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 08:59:53] 2.11.2.0 16148 24246 93248 146546 0 60 13545844 25165825 4637 130560 0 13895474 99.788 14895290 1762 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 08:59:53] CVMFS is ok
[2025-05-29 08:59:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 08:59:53] Checking for apptainer binary...
[2025-05-29 08:59:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 08:59:53] Running /usr/bin/apptainer --version
[2025-05-29 08:59:53] apptainer version 1.3.2-1.el7
[2025-05-29 08:59:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 09:00:01] cg-vwn372.simple-grid.lan
[2025-05-29 09:00:01] apptainer works
[2025-05-29 09:00:01] Set ATHENA_PROC_NUMBER=8
[2025-05-29 09:00:01] Set ATHENA_CORE_NUMBER=8
[2025-05-29 09:00:01] Starting ATLAS job with PandaID=6668532483
[2025-05-29 09:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:38:14]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:38:14] 2025-05-29 12:23:56,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 14:38:14] 2025-05-29 12:23:56,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 14:38:14] 2025-05-29 12:23:56,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 14:38:14] 2025-05-29 12:23:56,316 | INFO     | fitting pss+swap vs Time
[2025-05-29 14:38:14] 2025-05-29 12:23:56,317 | INFO     | sum of square deviations: 8971993338.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,320 | INFO     | sum of deviations: 116013460183.00003
[2025-05-29 14:38:14] 2025-05-29 12:23:56,320 | INFO     | mean x: 1748512001.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,320 | INFO     | mean y: 2429195.9120521173
[2025-05-29 14:38:14] 2025-05-29 12:23:56,320 | INFO     | -- intersect: -22606919670.67214
[2025-05-29 14:38:14] 2025-05-29 12:23:56,321 | INFO     | intersect: -22606919670.67214
[2025-05-29 14:38:14] 2025-05-29 12:23:56,321 | INFO     | chi2: 7.430048833941373
[2025-05-29 14:38:14] 2025-05-29 12:23:56,322 | INFO     | sum of square deviations: 8540720135.5
[2025-05-29 14:38:14] 2025-05-29 12:23:56,324 | INFO     | sum of deviations: 155325616441.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,325 | INFO     | mean x: 1748511848.5
[2025-05-29 14:38:14] 2025-05-29 12:23:56,325 | INFO     | mean y: 2442952.582781457
[2025-05-29 14:38:14] 2025-05-29 12:23:56,325 | INFO     | -- intersect: -31796828820.03751
[2025-05-29 14:38:14] 2025-05-29 12:23:56,325 | INFO     | intersect: -31796828820.03751
[2025-05-29 14:38:14] 2025-05-29 12:23:56,326 | INFO     | chi2: 5.867085288837637
[2025-05-29 14:38:14] 2025-05-29 12:23:56,326 | INFO     | current chi2=5.867085288837637 (change=21.035710262951802 %)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,326 | INFO     | right removable region: 301
[2025-05-29 14:38:14] 2025-05-29 12:23:56,326 | INFO     | sum of square deviations: 8540720135.5
[2025-05-29 14:38:14] 2025-05-29 12:23:56,329 | INFO     | sum of deviations: 10575504638.500008
[2025-05-29 14:38:14] 2025-05-29 12:23:56,330 | INFO     | mean x: 1748512153.5
[2025-05-29 14:38:14] 2025-05-29 12:23:56,330 | INFO     | mean y: 2466454.1026490065
[2025-05-29 14:38:14] 2025-05-29 12:23:56,330 | INFO     | -- intersect: -2162620107.2696543
[2025-05-29 14:38:14] 2025-05-29 12:23:56,330 | INFO     | intersect: -2162620107.2696543
[2025-05-29 14:38:14] 2025-05-29 12:23:56,330 | INFO     | chi2: 2.8265515089585596
[2025-05-29 14:38:14] 2025-05-29 12:23:56,331 | INFO     | current chi2=2.8265515089585596 (change=61.957834031365635 %)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,331 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,334 | INFO     | sum of deviations: -35866147491.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,334 | INFO     | mean x: 1748512306.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,334 | INFO     | mean y: 2483341.6565656564
[2025-05-29 14:38:14] 2025-05-29 12:23:56,334 | INFO     | -- intersect: 7722363791.008731
[2025-05-29 14:38:14] 2025-05-29 12:23:56,335 | INFO     | intersect: 7722363791.008731
[2025-05-29 14:38:14] 2025-05-29 12:23:56,335 | INFO     | chi2: 1.7274282095641253
[2025-05-29 14:38:14] 2025-05-29 12:23:56,335 | INFO     | current chi2=1.7274282095641253 (change=38.88566318041043 %)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,336 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,339 | INFO     | sum of deviations: -31264706674.999996
[2025-05-29 14:38:14] 2025-05-29 12:23:56,339 | INFO     | mean x: 1748512458.5
[2025-05-29 14:38:14] 2025-05-29 12:23:56,339 | INFO     | mean y: 2481581.6506849313
[2025-05-29 14:38:14] 2025-05-29 12:23:56,339 | INFO     | -- intersect: 7083589362.98089
[2025-05-29 14:38:14] 2025-05-29 12:23:56,339 | INFO     | intersect: 7083589362.98089
[2025-05-29 14:38:14] 2025-05-29 12:23:56,340 | INFO     | chi2: 1.7057933354441999
[2025-05-29 14:38:14] 2025-05-29 12:23:56,340 | INFO     | current chi2=1.7057933354441999 (change=1.2524326047323564 %)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,340 | INFO     | left removable region: 30
[2025-05-29 14:38:14] 2025-05-29 12:23:56,340 | INFO     | sum of square deviations: 6171352920.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,343 | INFO     | sum of deviations: 9974620203.999987
[2025-05-29 14:38:14] 2025-05-29 12:23:56,343 | INFO     | mean x: 1748512733.0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,343 | INFO     | mean y: 2496395.022140221
[2025-05-29 14:38:14] 2025-05-29 12:23:56,343 | INFO     | -- intersect: -2823585771.9872026
[2025-05-29 14:38:14] 2025-05-29 12:23:56,343 | INFO     | intersect: -2823585771.9872026
[2025-05-29 14:38:14] 2025-05-29 12:23:56,344 | INFO     | chi2: 0.0005980441622551668
[2025-05-29 14:38:14] 2025-05-29 12:23:56,344 | INFO     | -- intersect: -2823585771.9872026
[2025-05-29 14:38:14] 2025-05-29 12:23:56,344 | INFO     | current memory leak: 1.62 B/s (using 271 data points, chi2=0.00)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | ..............................
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | . Timing measurements:
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | . get job = 0 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | . initial setup = 10 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | . payload setup = 132 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,345 | INFO     | . stage-in = 0 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,346 | INFO     | . payload execution = 18810 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,346 | INFO     | . stage-out = 3 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,346 | INFO     | . log creation = 1 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,346 | INFO     | ..............................
[2025-05-29 14:38:14] 2025-05-29 12:23:56,477 | INFO     | 
[2025-05-29 14:38:14] 2025-05-29 12:23:56,477 | INFO     | job summary report
[2025-05-29 14:38:14] 2025-05-29 12:23:56,477 | INFO     | --------------------------------------------------
[2025-05-29 14:38:14] 2025-05-29 12:23:56,477 | INFO     | PanDA job id: 6668532483
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | task id: 44871837
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | errors: (none)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | pilot state: finished 
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | transexitcode: 0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | exeerrorcode: 0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | exeerrordiag: 
[2025-05-29 14:38:14] 2025-05-29 12:23:56,478 | INFO     | exitcode: 0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | exitmsg: OK
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | cpuconsumptiontime: 71051 s
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | nevents: 400
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | neventsw: 0
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | pid: 10165
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | pgrp: 10165
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | corecount: 8
[2025-05-29 14:38:14] 2025-05-29 12:23:56,479 | INFO     | event service: False
[2025-05-29 14:38:14] 2025-05-29 12:23:56,480 | INFO     | sizes: {0: 2405064, 1: 2405092, 2: 2405263, 12: 2405291, 23: 2405319, 34: 2405347, 45: 2405503, 55: 2405531, 66: 2405559, 77: 2405587, 87: 2405643, 90: 2406157, 98
[2025-05-29 14:38:14] 2025-05-29 12:23:56,480 | INFO     | --------------------------------------------------
[2025-05-29 14:38:14] 2025-05-29 12:23:56,480 | INFO     | 
[2025-05-29 14:38:14] 2025-05-29 12:23:56,480 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-29 14:38:14] 2025-05-29 12:23:56,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:38:14] 2025-05-29 12:23:56,506 | INFO     | job 6668532483 has completed (purged errors)
[2025-05-29 14:38:14] 2025-05-29 12:23:56,507 | INFO     | overall cleanup function is called
[2025-05-29 14:38:14] 2025-05-29 12:23:57,516 | INFO     | --- collectZombieJob: --- 10, [10165]
[2025-05-29 14:38:14] 2025-05-29 12:23:57,516 | INFO     | zombie collector waiting for pid 10165
[2025-05-29 14:38:14] 2025-05-29 12:23:57,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:38:14] 2025-05-29 12:23:57,516 | INFO     | collected zombie processes
[2025-05-29 14:38:14] 2025-05-29 12:23:57,516 | INFO     | will attempt to kill all subprocesses of pid=10165
[2025-05-29 14:38:14] 2025-05-29 12:23:57,650 | INFO     | process IDs to be killed: [10165] (in reverse order)
[2025-05-29 14:38:14] 2025-05-29 12:23:58,219 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:38:14] 2025-05-29 12:23:58,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:38:14] 2025-05-29 12:23:58,223 | INFO     | did not find any defunct processes belonging to 10165
[2025-05-29 14:38:14] 2025-05-29 12:23:58,226 | INFO     | did not find any defunct processes belonging to 10165
[2025-05-29 14:38:14] 2025-05-29 12:23:58,227 | INFO     | ready for new job
[2025-05-29 14:38:14] 2025-05-29 12:23:58,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:38:14] 2025-05-29 12:23:58,229 | INFO     | **************************************
[2025-05-29 14:38:14] 2025-05-29 12:23:58,229 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:38:14] 2025-05-29 12:23:58,229 | INFO     | **************************************
[2025-05-29 14:38:14] 2025-05-29 12:23:58,229 | INFO     | 
[2025-05-29 14:38:14] 2025-05-29 12:23:58,230 | INFO     | pilot is running in a VM
[2025-05-29 14:38:14] 2025-05-29 12:23:58,230 | INFO     | architecture information:
[2025-05-29 14:38:14] 2025-05-29 12:23:58,245 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:38:14] 2025-05-29 12:23:58,451 | INFO     | cat /etc/os-release:
[2025-05-29 14:38:14] NAME="CentOS Linux"
[2025-05-29 14:38:14] VERSION="7 (Core)"
[2025-05-29 14:38:14] ID="centos"
[2025-05-29 14:38:14] ID_LIKE="rhel fedora"
[2025-05-29 14:38:14] VERSION_ID="7"
[2025-05-29 14:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:38:14] ANSI_COLOR="0;31"
[2025-05-29 14:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:38:14] HOME_URL="https://www.centos.org/"
[2025-05-29 14:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:38:14] 
[2025-05-29 14:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:38:14] 
[2025-05-29 14:38:14] 2025-05-29 12:23:58,451 | INFO     | **************************************
[2025-05-29 14:38:14] 2025-05-29 12:23:58,533 | INFO     | PID=1593 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-29 14:38:14] 2025-05-29 12:23:58,534 | INFO     | .. there are 9 such processes running
[2025-05-29 14:38:14] 2025-05-29 12:23:58,955 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-29 14:38:14] 2025-05-29 12:23:59,144 | INFO     | sufficient remaining disk space (495726886912 B)
[2025-05-29 14:38:14] 2025-05-29 12:23:59,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:38:14] 2025-05-29 12:23:59,144 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:38:14] 2025-05-29 12:23:59,145 | INFO     | update_server=False
[2025-05-29 14:38:14] 2025-05-29 12:23:59,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:38:14] 2025-05-29 12:23:59,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:38:14] 2025-05-29 12:23:59,146 | INFO     | aborting loop
[2025-05-29 14:38:14] 2025-05-29 12:23:59,151 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 14:38:14] 2025-05-29 12:23:59,151 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:38:14] 2025-05-29 12:23:59,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:38:14] 2025-05-29 12:23:59,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:38:14] 2025-05-29 12:23:59,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:38:14] 2025-05-29 12:24:00,069 | INFO     | all data control threads have been joined
[2025-05-29 14:38:14] 2025-05-29 12:24:00,069 | INFO     | all job control threads have been joined
[2025-05-29 14:38:14] 2025-05-29 12:24:00,127 | INFO     | all payload control threads have been joined
[2025-05-29 14:38:14] 2025-05-29 12:24:00,151 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,152 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,240 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,539 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,735 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,934 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:00,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:38:14] 2025-05-29 12:24:01,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,075 | INFO     | [data] control thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,075 | INFO     | [job] control thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,097 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,133 | INFO     | [payload] control thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,250 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,372 | INFO     | [job] validate thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,388 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:01,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:38:14] 2025-05-29 12:24:02,498 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:04,951 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:38:14] 2025-05-29 12:24:06,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430004766528)>', '<ExcThread(monitor, started 140429567706880)>']
[2025-05-29 14:38:14] 2025-05-29 12:24:07,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:38:14] 2025-05-29 12:24:07,199 | INFO     | [monitor] control thread has ended
[2025-05-29 14:38:14] 2025-05-29 12:24:11,608 | INFO     | all workflow threads have been joined
[2025-05-29 14:38:14] 2025-05-29 12:24:11,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:38:14] 2025-05-29 12:24:11,608 | INFO     | traces error code: 0
[2025-05-29 14:38:14] 2025-05-29 12:24:11,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:38:14] 2025-05-29 12:24:11,978 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:38:14] 2025-05-29 12:24:12,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:38:14] 2025-05-29 12:24:12,193 [wrapper] pilotpid: 1593
[2025-05-29 14:38:14] 2025-05-29 12:24:12,291 [wrapper] Pilot exit status: 0
[2025-05-29 14:38:14] 2025-05-29 12:24:12,762 [wrapper] pandaids: 6668532483
[2025-05-29 14:38:14] 2025-05-29 12:24:13,741 [wrapper] cleanup supervisor_pilot 15360 1594
[2025-05-29 14:38:14] 2025-05-29 12:24:13,849 [wrapper] Test setup, not cleaning
[2025-05-29 14:38:14] 2025-05-29 12:24:13,974 [wrapper] apfmon messages muted
[2025-05-29 14:38:14] 2025-05-29 12:24:14,059 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:38:14] 2025-05-29 12:24:14,162 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:38:14]  *** Error codes and diagnostics ***
[2025-05-29 14:38:14]     "exeErrorCode": 0,
[2025-05-29 14:38:14]     "exeErrorDiag": "",
[2025-05-29 14:38:14]     "pilotErrorCode": 0,
[2025-05-29 14:38:14]     "pilotErrorDiag": "",
[2025-05-29 14:38:14]  *** Listing of results directory ***
[2025-05-29 14:38:14] total 417468
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc    495897 May 28 16:07 pilot3.tar.gz
[2025-05-29 14:38:14] -rwx------. 1 boinc boinc     37140 May 28 16:36 runpilot2-wrapper.sh
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc      5111 May 28 16:36 queuedata.json
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc       100 May 29 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:38:14] -rwxr-xr-x. 1 boinc boinc      7986 May 29 08:59 run_atlas
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc       105 May 29 08:59 job.xml
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc 225069202 May 29 08:59 EVNT.44871834._003343.pool.root.1
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc     15093 May 29 08:59 start_atlas.sh
[2025-05-29 14:38:14] drwxrwx--x. 2 boinc boinc        68 May 29 08:59 shared
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc    508874 May 29 08:59 input.tar.gz
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc      6372 May 29 08:59 init_data.xml
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc         0 May 29 08:59 boinc_lockfile
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc      2559 May 29 09:00 pandaJob.out
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc    993147 May 29 09:03 agis_schedconf.cvmfs.json
[2025-05-29 14:38:14] drwx------. 4 boinc boinc      4096 May 29 09:03 pilot3
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc 194424114 May 29 14:20 HITS.44871837._085728.pool.root.1
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc       531 May 29 14:21 boinc_task_state.xml
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc      1016 May 29 14:22 memory_monitor_summary.json
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc   1603667 May 29 14:22 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc    433355 May 29 14:22 log.44871837._085728.job.log.tgz.1
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc        95 May 29 14:23 pilot_heartbeat.json
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc      7690 May 29 14:23 heartbeat.json
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc      4931 May 29 14:24 pilotlog.txt
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc   1648516 May 29 14:24 log.44871837._085728.job.log.1
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc       357 May 29 14:24 output.list
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc       620 May 29 14:24 runtime_log
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc   2099200 May 29 14:24 result.tar.gz
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc      8673 May 29 14:24 runtime_log.err
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc       657 May 29 14:24 eHPODmA4We7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBfTKDm2jut1n.diag
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc      8192 May 29 14:38 boinc_mmap_file
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc        28 May 29 14:38 wrapper_checkpoint.txt
[2025-05-29 14:38:14] -rw-r--r--. 1 boinc boinc     20634 May 29 14:38 stderr.txt
[2025-05-29 14:38:14] HITS file was successfully produced:
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc 194424114 May 29 14:20 shared/HITS.pool.root.1
[2025-05-29 14:38:14]  *** Contents of shared directory: ***
[2025-05-29 14:38:14] total 412232
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc 225069202 May 29 08:59 ATLAS.root_0
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc     15093 May 29 08:59 start_atlas.sh
[2025-05-29 14:38:14] -rw-r--r--. 2 boinc boinc    508874 May 29 08:59 input.tar.gz
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc 194424114 May 29 14:20 HITS.pool.root.1
[2025-05-29 14:38:14] -rw-------. 1 boinc boinc   2099200 May 29 14:24 result.tar.gz
14:38:16 (27197): run_atlas exited; CPU time 71320.456610
14:38:16 (27197): called boinc_finish(0)

</stderr_txt>
]]>

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