Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:03:50 (570564): wrapper (7.7.26015): starting
13:03:50 (570564): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 13:03:50] Arguments: --nthreads 12
[2025-05-28 13:03:50] Threads: 12
[2025-05-28 13:03:50] Checking for CVMFS
[2025-05-28 13:03:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 13:03:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 13:03:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 13:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 13:03:50] 2.11.5.0 1286055 13967 235900 146529 1 685 35934661 45568001 12439 130560 0 151183138 99.827 70132263 26194 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 13:03:50] CVMFS is ok
[2025-05-28 13:03:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 13:03:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 13:03:50] Further information can be found at the LHC@home message board.
[2025-05-28 13:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 13:03:50] Checking for apptainer binary...
[2025-05-28 13:03:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 13:03:50] Running /usr/bin/apptainer --version
[2025-05-28 13:03:50] apptainer version 1.4.0-1.el9
[2025-05-28 13:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 13:03:51] wns0099.triumf.lcg
[2025-05-28 13:03:51] apptainer works
[2025-05-28 13:03:51] Set ATHENA_PROC_NUMBER=12
[2025-05-28 13:03:51] Set ATHENA_CORE_NUMBER=12
[2025-05-28 13:03:51] Starting ATLAS job with PandaID=6668728475
[2025-05-28 13:03:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 13:06:56]  *** The last 200 lines of the pilot log: ***
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | found no stored workdir sizes
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | WARNING  | wrong length of table data, x=[1748462664.0], y=[824.0] (must be same and length>=4)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . Timing measurements:
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . get job = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . initial setup = 2 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload setup = 4 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-in = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload execution = 16 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-out = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . log creation = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668728475/pilotlog.txt
[2025-05-28 13:06:56] 2025-05-28 20:06:42,067 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 13:06:56] - Log from pilotlog.txt -
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | INFO     | extracted standard info from prmon json
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | found no stored workdir sizes
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | WARNING  | wrong length of table data, x=[1748462664.0], y=[824.0] (must be same and length>=4)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . Timing measurements:
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . get job = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . initial setup = 2 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload setup = 4 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-in = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload execution = 16 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-out = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . log creation = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668728475/pilotlog.txt
[2025-05-28 13:06:56] 2025-05-28 20:06:42,067 | WARNING  | 
[2025-05-28 13:06:56] [begin log extracts]
[2025-05-28 13:06:56] - Log from pilotlog.txt -
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | INFO     | extracted standard info from prmon json
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 13:06:56] 2025-05-28 20:06:42,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | WARNING  | found no stored workdir sizes
[2025-05-28 13:06:56] 2025-05-28 20:06:42,053 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | WARNING  | wrong length of table data, x=[1748462664.0], y=[824.0] (must be same and length>=4)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . Timing measurements:
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . get job = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . initial setup = 2 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload setup = 4 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-in = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . payload execution = 16 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . stage-out = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,054 | INFO     | . log creation = 0 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | ..............................
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 13:06:56] 2025-05-28 20:06:42,055 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668728475/pilotlog.txt
[2025-05-28 13:06:56] [end log extracts]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,067 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,068 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | 
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | job summary report
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | --------------------------------------------------
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | PanDA job id: 6668728475
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | task id: 44871837
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 13:04:31,395 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 13:06:56] 2025-05-28 20:06:42,580 | INFO     | pilot state: failed 
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | transexitcode: 65
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | exeerrorcode: 65
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | exitcode: 65
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | cpuconsumptiontime: 16 s
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | nevents: 0
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | neventsw: 0
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | pid: 580432
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | pgrp: 580432
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | corecount: 12
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | event service: False
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | sizes: {0: 2405010, 1: 2405209, 4: 2405415, 11: 2405443, 24: 2428571, 25: 2432806, 28: 2432962, 147: 2433104}
[2025-05-28 13:06:56] 2025-05-28 20:06:42,581 | INFO     | --------------------------------------------------
[2025-05-28 13:06:56] 2025-05-28 20:06:42,582 | INFO     | 
[2025-05-28 13:06:56] 2025-05-28 20:06:42,582 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 13:06:56] 2025-05-28 20:06:42,601 | INFO     | job 6668728475 has completed (purged errors)
[2025-05-28 13:06:56] 2025-05-28 20:06:42,601 | INFO     | overall cleanup function is called
[2025-05-28 13:06:56] 2025-05-28 20:06:43,607 | INFO     | --- collectZombieJob: --- 10, [580432]
[2025-05-28 13:06:56] 2025-05-28 20:06:43,607 | INFO     | zombie collector waiting for pid 580432
[2025-05-28 13:06:56] 2025-05-28 20:06:43,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 13:06:56] 2025-05-28 20:06:43,608 | INFO     | collected zombie processes
[2025-05-28 13:06:56] 2025-05-28 20:06:43,608 | INFO     | will attempt to kill all subprocesses of pid=580432
[2025-05-28 13:06:56] 2025-05-28 20:06:43,758 | INFO     | process IDs to be killed: [580432] (in reverse order)
[2025-05-28 13:06:56] 2025-05-28 20:06:43,812 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 13:06:56] 2025-05-28 20:06:43,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 13:06:56] 2025-05-28 20:06:43,818 | INFO     | did not find any defunct processes belonging to 580432
[2025-05-28 13:06:56] 2025-05-28 20:06:43,823 | INFO     | did not find any defunct processes belonging to 580432
[2025-05-28 13:06:56] 2025-05-28 20:06:43,824 | INFO     | ready for new job
[2025-05-28 13:06:56] 2025-05-28 20:06:43,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 13:06:56] 2025-05-28 20:06:43,826 | INFO     | **************************************
[2025-05-28 13:06:56] 2025-05-28 20:06:43,826 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 13:06:56] 2025-05-28 20:06:43,826 | INFO     | **************************************
[2025-05-28 13:06:56] 2025-05-28 20:06:43,826 | INFO     | 
[2025-05-28 13:06:56] 2025-05-28 20:06:43,828 | INFO     | architecture information:
[2025-05-28 13:06:56] 2025-05-28 20:06:43,828 | INFO     | executing command: cat /etc/os-release
[2025-05-28 13:06:56] 2025-05-28 20:06:43,845 | INFO     | cat /etc/os-release:
[2025-05-28 13:06:56] NAME="CentOS Linux"
[2025-05-28 13:06:56] VERSION="7 (Core)"
[2025-05-28 13:06:56] ID="centos"
[2025-05-28 13:06:56] ID_LIKE="rhel fedora"
[2025-05-28 13:06:56] VERSION_ID="7"
[2025-05-28 13:06:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 13:06:56] ANSI_COLOR="0;31"
[2025-05-28 13:06:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 13:06:56] HOME_URL="https://www.centos.org/"
[2025-05-28 13:06:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 13:06:56] 
[2025-05-28 13:06:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 13:06:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 13:06:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 13:06:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 13:06:56] 
[2025-05-28 13:06:56] 2025-05-28 20:06:43,845 | INFO     | **************************************
[2025-05-28 13:06:56] 2025-05-28 20:06:44,348 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 13:06:56] 2025-05-28 20:06:44,364 | INFO     | sufficient remaining disk space (1996831588352 B)
[2025-05-28 13:06:56] 2025-05-28 20:06:44,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 13:06:56] 2025-05-28 20:06:44,365 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 13:06:56] 2025-05-28 20:06:44,365 | INFO     | update_server=False
[2025-05-28 13:06:56] 2025-05-28 20:06:44,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 13:06:56] 2025-05-28 20:06:44,378 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 13:06:56] 2025-05-28 20:06:44,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 13:06:56] 2025-05-28 20:06:44,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 13:06:56] 2025-05-28 20:06:44,637 | INFO     | all data control threads have been joined
[2025-05-28 13:06:56] 2025-05-28 20:06:44,846 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 13:06:56] 2025-05-28 20:06:44,846 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 13:06:56] 2025-05-28 20:06:44,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 13:06:56] 2025-05-28 20:06:44,847 | INFO     | will abort loop
[2025-05-28 13:06:56] 2025-05-28 20:06:45,370 | INFO     | [job] retrieve thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 13:06:56] 2025-05-28 20:06:45,419 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,570 | INFO     | [payload] failed_post thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,643 | INFO     | [data] control thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,767 | INFO     | [payload] validate_post thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 13:06:56] 2025-05-28 20:06:45,830 | INFO     | all job control threads have been joined
[2025-05-28 13:06:56] 2025-05-28 20:06:45,848 | INFO     | all payload control threads have been joined
[2025-05-28 13:06:56] 2025-05-28 20:06:45,852 | INFO     | [job] job monitor thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:45,911 | INFO     | [data] copytool_in thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:46,646 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:46,650 | INFO     | [job] validate thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:46,790 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:46,835 | INFO     | [job] control thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:46,853 | INFO     | [payload] control thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:47,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 13:06:56] 2025-05-28 20:06:47,409 | INFO     | [data] copytool_out thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:48,144 | INFO     | [job] queue monitor thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:49,815 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 13:06:56] 2025-05-28 20:06:51,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171248473920)>', '<ExcThread(monitor, started 140170837858048)>']
[2025-05-28 13:06:56] 2025-05-28 20:06:52,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 13:06:56] 2025-05-28 20:06:52,419 | INFO     | [monitor] control thread has ended
[2025-05-28 13:06:56] 2025-05-28 20:06:56,590 | INFO     | all workflow threads have been joined
[2025-05-28 13:06:56] 2025-05-28 20:06:56,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 13:06:56] 2025-05-28 20:06:56,590 | INFO     | traces error code: 0
[2025-05-28 13:06:56] 2025-05-28 20:06:56,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 13:06:56] 2025-05-28 20:06:56,765 [wrapper] ==== pilot stdout END ====
[2025-05-28 13:06:56] 2025-05-28 20:06:56,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 13:06:56] 2025-05-28 20:06:56,769 [wrapper] pilotpid: 574130
[2025-05-28 13:06:56] 2025-05-28 20:06:56,771 [wrapper] Pilot exit status: 0
[2025-05-28 13:06:56] 2025-05-28 20:06:56,787 [wrapper] pandaids: 6668728475
[2025-05-28 13:06:56] 2025-05-28 20:06:56,821 [wrapper] cleanup supervisor_pilot  574136 574131
[2025-05-28 13:06:56] 2025-05-28 20:06:56,824 [wrapper] Test setup, not cleaning
[2025-05-28 13:06:56] 2025-05-28 20:06:56,825 [wrapper] apfmon messages muted
[2025-05-28 13:06:56] 2025-05-28 20:06:56,827 [wrapper] ==== wrapper stdout END ====
[2025-05-28 13:06:56] 2025-05-28 20:06:56,829 [wrapper] ==== wrapper stderr END ====
[2025-05-28 13:06:56]  *** Error codes and diagnostics ***
[2025-05-28 13:06:56]     "exeErrorCode": 65,
[2025-05-28 13:06:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 13:06:56]     "pilotErrorCode": 1305,
[2025-05-28 13:06:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 13:06:56]  *** Listing of results directory ***
[2025-05-28 13:06:56] total 223560
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc    495897 May 28 10:15 pilot3.tar.gz
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc      5111 May 28 10:24 queuedata.json
[2025-05-28 13:06:56] -rwx------. 1 boinc boinc     37140 May 28 10:24 runpilot2-wrapper.sh
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc       100 May 28 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 13:06:56] -rwxr-xr-x. 1 boinc boinc      7986 May 28 13:03 run_atlas
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc       105 May 28 13:03 job.xml
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc 224898282 May 28 13:03 EVNT.44871834._001818.pool.root.1
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc     15093 May 28 13:03 start_atlas.sh
[2025-05-28 13:06:56] drwxrwx--x. 2 boinc boinc      4096 May 28 13:03 shared
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc    508885 May 28 13:03 input.tar.gz
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc      6602 May 28 13:03 init_data.xml
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc         0 May 28 13:03 boinc_lockfile
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc      2559 May 28 13:03 pandaJob.out
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc    992429 May 28 13:03 agis_schedconf.cvmfs.json
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc   1603667 May 28 13:03 agis_ddmendpoints.agis.ALL.json
[2025-05-28 13:06:56] drwx------. 4 boinc boinc      4096 May 28 13:04 pilot3
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc       522 May 28 13:04 boinc_task_state.xml
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc       950 May 28 13:04 memory_monitor_summary.json
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc     20537 May 28 13:04 log.44871837._087846.job.log.tgz.1
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc        95 May 28 13:05 pilot_heartbeat.json
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc      8305 May 28 13:06 heartbeat.json
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc      8192 May 28 13:06 boinc_mmap_file
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc        22 May 28 13:06 wrapper_checkpoint.txt
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc      4538 May 28 13:06 pilotlog.txt
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc     73000 May 28 13:06 log.44871837._087846.job.log.1
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc       188 May 28 13:06 output.list
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc       620 May 28 13:06 runtime_log
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc    112640 May 28 13:06 result.tar.gz
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc      8484 May 28 13:06 runtime_log.err
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc       644 May 28 13:06 7R8KDmIhZe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmgcKDmrbxLGm.diag
[2025-05-28 13:06:56] -rw-r--r--. 1 boinc boinc     21458 May 28 13:06 stderr.txt
[2025-05-28 13:06:56] No HITS result produced
[2025-05-28 13:06:56]  *** Contents of shared directory: ***
[2025-05-28 13:06:56] total 220256
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc 224898282 May 28 13:03 ATLAS.root_0
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc     15093 May 28 13:03 start_atlas.sh
[2025-05-28 13:06:56] -rw-r--r--. 2 boinc boinc    508885 May 28 13:03 input.tar.gz
[2025-05-28 13:06:56] -rw-------. 1 boinc boinc    112640 May 28 13:06 result.tar.gz
13:06:58 (570564): run_atlas exited; CPU time 19.580301
13:06:58 (570564): called boinc_finish(0)

</stderr_txt>
]]>

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