Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:59:51 (1366467): wrapper (7.7.26015): starting
09:59:51 (1366467): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 09:59:51] Arguments: --nthreads 4
[2025-06-03 09:59:51] Threads: 4
[2025-06-03 09:59:51] Checking for CVMFS
[2025-06-03 09:59:51] No cvmfs_config command found, will try listing directly
[2025-06-03 09:59:51] CVMFS is ok
[2025-06-03 09:59:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:59:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:59:51] Further information can be found at the LHC@home message board.
[2025-06-03 09:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:59:51] Checking for apptainer binary...
[2025-06-03 09:59:51] which: no apptainer in ((null))
[2025-06-03 09:59:51] apptainer is not installed, using version from CVMFS
[2025-06-03 09:59:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:59:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-03 09:59:51] apptainer works
[2025-06-03 09:59:51] Set ATHENA_PROC_NUMBER=4
[2025-06-03 09:59:51] Set ATHENA_CORE_NUMBER=4
[2025-06-03 09:59:51] Starting ATLAS job with PandaID=6668531245
[2025-06-03 09:59:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:29:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:29:10] 2025-06-03 11:26:24,745 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:29:10] 2025-06-03 11:26:24,745 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668531245/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,747 | INFO     | extracted standard info from prmon json
[2025-06-03 13:29:10] 2025-06-03 11:26:24,747 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:29:10] 2025-06-03 11:26:24,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:29:10] 2025-06-03 11:26:24,748 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:29:10] 2025-06-03 11:26:24,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:29:10] 2025-06-03 11:26:24,754 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:29:10] 2025-06-03 11:26:24,755 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,756 | INFO     | sum of deviations: -8320753677.999996
[2025-06-03 13:29:10] 2025-06-03 11:26:24,757 | INFO     | mean x: 1748943792.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,757 | INFO     | mean y: 2326650.5862068967
[2025-06-03 13:29:10] 2025-06-03 11:26:24,757 | INFO     | -- intersect: 5612580586.774435
[2025-06-03 13:29:10] 2025-06-03 11:26:24,757 | INFO     | intersect: 5612580586.774435
[2025-06-03 13:29:10] 2025-06-03 11:26:24,758 | INFO     | chi2: 2.4090839073946437
[2025-06-03 13:29:10] 2025-06-03 11:26:24,758 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 13:29:10] 2025-06-03 11:26:24,760 | INFO     | sum of deviations: 3699672569.999993
[2025-06-03 13:29:10] 2025-06-03 11:26:24,760 | INFO     | mean x: 1748943639.5
[2025-06-03 13:29:10] 2025-06-03 11:26:24,760 | INFO     | mean y: 2336259.9292929294
[2025-06-03 13:29:10] 2025-06-03 11:26:24,761 | INFO     | -- intersect: -2685954177.5294065
[2025-06-03 13:29:10] 2025-06-03 11:26:24,761 | INFO     | intersect: -2685954177.5294065
[2025-06-03 13:29:10] 2025-06-03 11:26:24,761 | INFO     | chi2: 1.7205237201320327
[2025-06-03 13:29:10] 2025-06-03 11:26:24,761 | INFO     | current chi2=1.7205237201320327 (change=28.581826691427676 %)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,762 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,764 | INFO     | sum of deviations: 3608516854.0000043
[2025-06-03 13:29:10] 2025-06-03 11:26:24,764 | INFO     | mean x: 1748943487.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,764 | INFO     | mean y: 2336181.585492228
[2025-06-03 13:29:10] 2025-06-03 11:26:24,764 | INFO     | -- intersect: -2828833004.958027
[2025-06-03 13:29:10] 2025-06-03 11:26:24,764 | INFO     | intersect: -2828833004.958027
[2025-06-03 13:29:10] 2025-06-03 11:26:24,765 | INFO     | chi2: 1.7209367536734717
[2025-06-03 13:29:10] 2025-06-03 11:26:24,765 | INFO     | current chi2=1.7209367536734717 (change=-0.02400626835922147 %)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,765 | INFO     | right removable region: 192
[2025-06-03 13:29:10] 2025-06-03 11:26:24,765 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 13:29:10] 2025-06-03 11:26:24,767 | INFO     | sum of deviations: -39551014324.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,767 | INFO     | mean x: 1748943944.5
[2025-06-03 13:29:10] 2025-06-03 11:26:24,767 | INFO     | mean y: 2351853.0707070706
[2025-06-03 13:29:10] 2025-06-03 11:26:24,767 | INFO     | -- intersect: 28741282158.207222
[2025-06-03 13:29:10] 2025-06-03 11:26:24,768 | INFO     | intersect: 28741282158.207222
[2025-06-03 13:29:10] 2025-06-03 11:26:24,768 | INFO     | chi2: 0.820421231368877
[2025-06-03 13:29:10] 2025-06-03 11:26:24,768 | INFO     | current chi2=0.820421231368877 (change=65.94468009808179 %)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,769 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,770 | INFO     | sum of deviations: -37313304719.999985
[2025-06-03 13:29:10] 2025-06-03 11:26:24,771 | INFO     | mean x: 1748944097.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,771 | INFO     | mean y: 2349910.829015544
[2025-06-03 13:29:10] 2025-06-03 11:26:24,771 | INFO     | -- intersect: 29277622742.0197
[2025-06-03 13:29:10] 2025-06-03 11:26:24,771 | INFO     | intersect: 29277622742.0197
[2025-06-03 13:29:10] 2025-06-03 11:26:24,772 | INFO     | chi2: 0.8168325594853012
[2025-06-03 13:29:10] 2025-06-03 11:26:24,772 | INFO     | current chi2=0.8168325594853012 (change=0.4374182122990764 %)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,772 | INFO     | left removable region: 20
[2025-06-03 13:29:10] 2025-06-03 11:26:24,772 | INFO     | sum of square deviations: 1577789583.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,774 | INFO     | sum of deviations: -15823288004.0
[2025-06-03 13:29:10] 2025-06-03 11:26:24,774 | INFO     | mean x: 1748944066.5
[2025-06-03 13:29:10] 2025-06-03 11:26:24,774 | INFO     | mean y: 2352279.476744186
[2025-06-03 13:29:10] 2025-06-03 11:26:24,774 | INFO     | -- intersect: 17542109142.681
[2025-06-03 13:29:10] 2025-06-03 11:26:24,774 | INFO     | intersect: 17542109142.681
[2025-06-03 13:29:10] 2025-06-03 11:26:24,775 | INFO     | chi2: 0.08541709206366944
[2025-06-03 13:29:10] 2025-06-03 11:26:24,775 | INFO     | -- intersect: 17542109142.681
[2025-06-03 13:29:10] 2025-06-03 11:26:24,775 | INFO     | current memory leak: -10.03 B/s (using 172 data points, chi2=0.09)
[2025-06-03 13:29:10] 2025-06-03 11:26:24,776 | INFO     | ..............................
[2025-06-03 13:29:10] 2025-06-03 11:26:24,776 | INFO     | . Timing measurements:
[2025-06-03 13:29:10] 2025-06-03 11:26:24,776 | INFO     | . get job = 0 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,776 | INFO     | . initial setup = 1 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | . payload setup = 7 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | . stage-in = 0 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | . payload execution = 12342 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | . stage-out = 1 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | . log creation = 0 s
[2025-06-03 13:29:10] 2025-06-03 11:26:24,777 | INFO     | ..............................
[2025-06-03 13:29:10] 2025-06-03 11:26:25,053 | INFO     | 
[2025-06-03 13:29:10] 2025-06-03 11:26:25,053 | INFO     | job summary report
[2025-06-03 13:29:10] 2025-06-03 11:26:25,053 | INFO     | --------------------------------------------------
[2025-06-03 13:29:10] 2025-06-03 11:26:25,053 | INFO     | PanDA job id: 6668531245
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | task id: 44871837
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | errors: (none)
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | pilot state: finished 
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | transexitcode: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | exeerrorcode: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | exeerrordiag: 
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | exitcode: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | exitmsg: OK
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | cpuconsumptiontime: 47377 s
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | nevents: 400
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | neventsw: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | pid: 1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:25,054 | INFO     | pgrp: 1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | corecount: 4
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | event service: False
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | sizes: {0: 2405245, 5: 2405451, 11: 2405507, 12352: 2434997, 12353: 2434996, 12355: 2444015, 12357: 2444199, 12365: 2444369}
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | --------------------------------------------------
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | 
[2025-06-03 13:29:10] 2025-06-03 11:26:25,055 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-03 13:29:10] 2025-06-03 11:26:25,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:29:10] 2025-06-03 11:26:25,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:29:10] 2025-06-03 11:26:25,077 | INFO     | job 6668531245 has completed (purged errors)
[2025-06-03 13:29:10] 2025-06-03 11:26:25,077 | INFO     | overall cleanup function is called
[2025-06-03 13:29:10] 2025-06-03 11:26:26,084 | INFO     | --- collectZombieJob: --- 10, [1377852]
[2025-06-03 13:29:10] 2025-06-03 11:26:26,084 | INFO     | zombie collector waiting for pid 1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:26,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:29:10] 2025-06-03 11:26:26,084 | INFO     | collected zombie processes
[2025-06-03 13:29:10] 2025-06-03 11:26:26,085 | INFO     | will attempt to kill all subprocesses of pid=1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:26,450 | INFO     | process IDs to be killed: [1377852] (in reverse order)
[2025-06-03 13:29:10] 2025-06-03 11:26:26,558 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:29:10] 2025-06-03 11:26:26,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:29:10] 2025-06-03 11:26:26,572 | INFO     | did not find any defunct processes belonging to 1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:26,583 | INFO     | did not find any defunct processes belonging to 1377852
[2025-06-03 13:29:10] 2025-06-03 11:26:26,584 | INFO     | ready for new job
[2025-06-03 13:29:10] 2025-06-03 11:26:26,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:29:10] 2025-06-03 11:26:26,586 | INFO     | **************************************
[2025-06-03 13:29:10] 2025-06-03 11:26:26,586 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:29:10] 2025-06-03 11:26:26,586 | INFO     | **************************************
[2025-06-03 13:29:10] 2025-06-03 11:26:26,586 | INFO     | 
[2025-06-03 13:29:10] 2025-06-03 11:26:26,590 | INFO     | architecture information:
[2025-06-03 13:29:10] 2025-06-03 11:26:26,590 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:29:10] 2025-06-03 11:26:26,605 | INFO     | cat /etc/os-release:
[2025-06-03 13:29:10] NAME="CentOS Linux"
[2025-06-03 13:29:10] VERSION="7 (Core)"
[2025-06-03 13:29:10] ID="centos"
[2025-06-03 13:29:10] ID_LIKE="rhel fedora"
[2025-06-03 13:29:10] VERSION_ID="7"
[2025-06-03 13:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:29:10] ANSI_COLOR="0;31"
[2025-06-03 13:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:29:10] HOME_URL="https://www.centos.org/"
[2025-06-03 13:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:29:10] 
[2025-06-03 13:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:29:10] 
[2025-06-03 13:29:10] 2025-06-03 11:26:26,605 | INFO     | **************************************
[2025-06-03 13:29:10] 2025-06-03 11:26:27,108 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-03 13:29:10] 2025-06-03 11:26:27,124 | INFO     | sufficient remaining disk space (645218172928 B)
[2025-06-03 13:29:10] 2025-06-03 11:26:27,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:29:10] 2025-06-03 11:26:27,125 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:29:10] 2025-06-03 11:26:27,125 | INFO     | update_server=False
[2025-06-03 13:29:10] 2025-06-03 11:26:27,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:29:10] 2025-06-03 11:26:27,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:29:10] 2025-06-03 11:26:27,438 | INFO     | all data control threads have been joined
[2025-06-03 13:29:10] 2025-06-03 11:26:27,611 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:29:10] 2025-06-03 11:26:27,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:29:10] 2025-06-03 11:26:27,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:29:10] 2025-06-03 11:26:27,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:29:10] 2025-06-03 11:26:27,850 | INFO     | all job control threads have been joined
[2025-06-03 13:29:10] 2025-06-03 11:26:28,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:29:10] 2025-06-03 11:26:28,013 | INFO     | aborting loop
[2025-06-03 13:29:10] 2025-06-03 11:26:28,130 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:28,443 | INFO     | [data] control thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:28,576 | INFO     | all payload control threads have been joined
[2025-06-03 13:29:10] 2025-06-03 11:26:28,855 | INFO     | [job] control thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:28,890 | INFO     | [job] validate thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,018 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,044 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,062 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,170 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,496 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,571 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,579 | INFO     | [payload] control thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,598 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,697 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:29,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:29:10] 2025-06-03 11:26:30,918 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:31,343 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:29:10] 2025-06-03 11:26:32,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22663930898240)>', '<ExcThread(monitor, started 22663693043456)>']
[2025-06-03 13:29:10] 2025-06-03 11:26:32,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:29:10] 2025-06-03 11:26:32,632 | INFO     | [monitor] control thread has ended
[2025-06-03 13:29:10] 2025-06-03 11:26:37,399 | INFO     | all workflow threads have been joined
[2025-06-03 13:29:10] 2025-06-03 11:26:37,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:29:10] 2025-06-03 11:26:37,400 | INFO     | traces error code: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:37,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:29:10] 2025-06-03 11:26:37,563 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:29:10] 2025-06-03 11:26:37,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:29:10] 2025-06-03 11:26:37,569 [wrapper] pilotpid: 1370519
[2025-06-03 13:29:10] 2025-06-03 11:26:37,572 [wrapper] Pilot exit status: 0
[2025-06-03 13:29:10] 2025-06-03 11:26:37,583 [wrapper] pandaids: 6668531245
[2025-06-03 13:29:10] 2025-06-03 11:26:37,656 [wrapper] cleanup supervisor_pilot 1722049 1370520
[2025-06-03 13:29:10] 2025-06-03 11:26:37,660 [wrapper] Test setup, not cleaning
[2025-06-03 13:29:10] 2025-06-03 11:26:37,663 [wrapper] apfmon messages muted
[2025-06-03 13:29:10] 2025-06-03 11:26:37,668 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:29:10] 2025-06-03 11:26:37,672 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:29:10]  *** Error codes and diagnostics ***
[2025-06-03 13:29:10]     "exeErrorCode": 0,
[2025-06-03 13:29:10]     "exeErrorDiag": "",
[2025-06-03 13:29:10]     "pilotErrorCode": 0,
[2025-06-03 13:29:10]     "pilotErrorDiag": "",
[2025-06-03 13:29:10]  *** Listing of results directory ***
[2025-06-03 13:29:10] total 576528
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc    495897 May 28 15:15 pilot3.tar.gz
[2025-06-03 13:29:10] -rwx------ 1 boinc boinc     37140 May 28 15:46 runpilot2-wrapper.sh
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc      5111 May 28 15:46 queuedata.json
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc       100 Jun  3 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:29:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 07:08 run_atlas
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc       105 Jun  3 07:08 job.xml
[2025-06-03 13:29:10] -rw------- 2 boinc boinc 167444480 Jun  3 07:09 copy_rcEwvO
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc      6636 Jun  3 09:59 init_data.xml
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc 223955125 Jun  3 09:59 EVNT.44871834._003317.pool.root.1
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:59 start_atlas.sh
[2025-06-03 13:29:10] drwxrwx--x 2 boinc boinc      4096 Jun  3 09:59 shared
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc    508878 Jun  3 09:59 input.tar.gz
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc         0 Jun  3 09:59 boinc_lockfile
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc      2559 Jun  3 09:59 pandaJob.out
[2025-06-03 13:29:10] -rw------- 1 boinc boinc    985499 Jun  3 10:00 agis_schedconf.cvmfs.json
[2025-06-03 13:29:10] drwx------ 4 boinc boinc      4096 Jun  3 10:00 pilot3
[2025-06-03 13:29:10] -rw------- 1 boinc boinc        95 Jun  3 13:25 pilot_heartbeat.json
[2025-06-03 13:29:10] -rw------- 1 boinc boinc 192190538 Jun  3 13:25 HITS.44871837._085071.pool.root.1
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc       528 Jun  3 13:25 boinc_task_state.xml
[2025-06-03 13:29:10] -rw------- 1 boinc boinc      1034 Jun  3 13:26 memory_monitor_summary.json
[2025-06-03 13:29:10] -rw------- 1 boinc boinc   1603667 Jun  3 13:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:29:10] -rw------- 1 boinc boinc    313440 Jun  3 13:26 log.44871837._085071.job.log.tgz.1
[2025-06-03 13:29:10] -rw------- 1 boinc boinc      7729 Jun  3 13:26 heartbeat.json
[2025-06-03 13:29:10] -rw------- 1 boinc boinc      4363 Jun  3 13:26 pilotlog.txt
[2025-06-03 13:29:10] -rw------- 1 boinc boinc   1153885 Jun  3 13:26 log.44871837._085071.job.log.1
[2025-06-03 13:29:10] -rw------- 1 boinc boinc       357 Jun  3 13:26 output.list
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc       620 Jun  3 13:26 runtime_log
[2025-06-03 13:29:10] -rw------- 1 boinc boinc   1484800 Jun  3 13:26 result.tar.gz
[2025-06-03 13:29:10] -rw------- 1 boinc boinc       665 Jun  3 13:26 yuxNDmDIWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyGcKDmKq5Q7m.diag
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc      9026 Jun  3 13:26 runtime_log.err
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc        26 Jun  3 13:28 wrapper_checkpoint.txt
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc      8192 Jun  3 13:29 boinc_mmap_file
[2025-06-03 13:29:10] -rw-r--r-- 1 boinc boinc     20605 Jun  3 13:29 stderr.txt
[2025-06-03 13:29:10] HITS file was successfully produced:
[2025-06-03 13:29:10] -rw------- 1 boinc boinc 192190538 Jun  3 13:25 shared/HITS.pool.root.1
[2025-06-03 13:29:10]  *** Contents of shared directory: ***
[2025-06-03 13:29:10] total 571896
[2025-06-03 13:29:10] -rw------- 2 boinc boinc 167444480 Jun  3 07:09 copy_rcEwvO
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc 223955125 Jun  3 09:59 ATLAS.root_0
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:59 start_atlas.sh
[2025-06-03 13:29:10] -rw-r--r-- 2 boinc boinc    508878 Jun  3 09:59 input.tar.gz
[2025-06-03 13:29:10] -rw------- 1 boinc boinc 192190538 Jun  3 13:25 HITS.pool.root.1
[2025-06-03 13:29:10] -rw------- 1 boinc boinc   1484800 Jun  3 13:26 result.tar.gz
13:29:12 (1366467): run_atlas exited; CPU time 47829.877277
13:29:12 (1366467): called boinc_finish(0)

</stderr_txt>
]]>

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