Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:41 (11564): wrapper (7.7.26015): starting
08:28:41 (11564): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 08:28:41] Arguments: --nthreads 8
[2025-05-29 08:28:41] Threads: 8
[2025-05-29 08:28:41] Checking for CVMFS
[2025-05-29 08:28:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 08:28:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 08:28:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 08:28:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 08:28:44] 2.11.2.0 26867 24208 92032 146546 0 14 17532045 25165824 4242 130560 0 13367673 99.823 14327794 1748 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 08:28:44] CVMFS is ok
[2025-05-29 08:28:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 08:28:44] Checking for apptainer binary...
[2025-05-29 08:28:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 08:28:44] Running /usr/bin/apptainer --version
[2025-05-29 08:28:44] apptainer version 1.3.2-1.el7
[2025-05-29 08:28:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 08:28:58] cg-vwn435.simple-grid.lan
[2025-05-29 08:28:58] apptainer works
[2025-05-29 08:28:58] Set ATHENA_PROC_NUMBER=8
[2025-05-29 08:28:58] Set ATHENA_CORE_NUMBER=8
[2025-05-29 08:28:58] Starting ATLAS job with PandaID=6668443386
[2025-05-29 08:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:06:58]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:06:58] 2025-05-29 11:44:58,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 14:06:58] 2025-05-29 11:44:58,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 14:06:58] 2025-05-29 11:44:58,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 14:06:58] 2025-05-29 11:44:58,077 | INFO     | fitting pss+swap vs Time
[2025-05-29 14:06:58] 2025-05-29 11:44:58,078 | INFO     | sum of square deviations: 8288713550.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,081 | INFO     | sum of deviations: 87752975814.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,081 | INFO     | mean x: 1748509889.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,081 | INFO     | mean y: 2454657.214046823
[2025-05-29 14:06:58] 2025-05-29 11:44:58,081 | INFO     | -- intersect: -18509096631.70181
[2025-05-29 14:06:58] 2025-05-29 11:44:58,081 | INFO     | intersect: -18509096631.70181
[2025-05-29 14:06:58] 2025-05-29 11:44:58,082 | INFO     | chi2: 8.10334813301607
[2025-05-29 14:06:58] 2025-05-29 11:44:58,083 | INFO     | sum of square deviations: 7879803557.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,086 | INFO     | sum of deviations: 106084529558.49997
[2025-05-29 14:06:58] 2025-05-29 11:44:58,086 | INFO     | mean x: 1748509736.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,086 | INFO     | mean y: 2461393.9217687077
[2025-05-29 14:06:58] 2025-05-29 11:44:58,086 | INFO     | -- intersect: -23537444324.73158
[2025-05-29 14:06:58] 2025-05-29 11:44:58,086 | INFO     | intersect: -23537444324.73158
[2025-05-29 14:06:58] 2025-05-29 11:44:58,087 | INFO     | chi2: 7.395034245115327
[2025-05-29 14:06:58] 2025-05-29 11:44:58,087 | INFO     | current chi2=7.395034245115327 (change=8.741002808639148 %)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,087 | INFO     | right removable region: 293
[2025-05-29 14:06:58] 2025-05-29 11:44:58,088 | INFO     | sum of square deviations: 7879803557.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,090 | INFO     | sum of deviations: -19654604796.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,091 | INFO     | mean x: 1748510041.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,091 | INFO     | mean y: 2494699.6258503404
[2025-05-29 14:06:58] 2025-05-29 11:44:58,091 | INFO     | -- intersect: 4363805688.757074
[2025-05-29 14:06:58] 2025-05-29 11:44:58,091 | INFO     | intersect: 4363805688.757074
[2025-05-29 14:06:58] 2025-05-29 11:44:58,092 | INFO     | chi2: 2.965572691981761
[2025-05-29 14:06:58] 2025-05-29 11:44:58,092 | INFO     | current chi2=2.965572691981761 (change=63.403118768908506 %)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,092 | INFO     | sum of square deviations: 7484568240.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,095 | INFO     | sum of deviations: -82773689468.99997
[2025-05-29 14:06:58] 2025-05-29 11:44:58,095 | INFO     | mean x: 1748510194.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,095 | INFO     | mean y: 2518973.6955017303
[2025-05-29 14:06:58] 2025-05-29 11:44:58,095 | INFO     | -- intersect: 19339725234.71249
[2025-05-29 14:06:58] 2025-05-29 11:44:58,095 | INFO     | intersect: 19339725234.71249
[2025-05-29 14:06:58] 2025-05-29 11:44:58,096 | INFO     | chi2: 1.056840230689291
[2025-05-29 14:06:58] 2025-05-29 11:44:58,096 | INFO     | current chi2=1.056840230689291 (change=64.36303067037446 %)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,097 | INFO     | sum of square deviations: 7102775035.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,099 | INFO     | sum of deviations: -82091081443.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,099 | INFO     | mean x: 1748510346.5
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | mean y: 2518668.8767605633
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | -- intersect: 20211113837.952663
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | intersect: 20211113837.952663
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | chi2: 1.0224255592199332
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | current chi2=1.0224255592199332 (change=3.256374092317809 %)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,100 | INFO     | left removable region: 30
[2025-05-29 14:06:58] 2025-05-29 11:44:58,101 | INFO     | sum of square deviations: 5640782972.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,103 | INFO     | sum of deviations: -34179308513.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,104 | INFO     | mean x: 1748510621.0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,104 | INFO     | mean y: 2514661.680608365
[2025-05-29 14:06:58] 2025-05-29 11:44:58,104 | INFO     | -- intersect: 10597299862.612856
[2025-05-29 14:06:58] 2025-05-29 11:44:58,104 | INFO     | intersect: 10597299862.612856
[2025-05-29 14:06:58] 2025-05-29 11:44:58,104 | INFO     | chi2: 0.1795715660953236
[2025-05-29 14:06:58] 2025-05-29 11:44:58,105 | INFO     | -- intersect: 10597299862.612856
[2025-05-29 14:06:58] 2025-05-29 11:44:58,105 | INFO     | current memory leak: -6.06 B/s (using 263 data points, chi2=0.18)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | ..............................
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . Timing measurements:
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . get job = 0 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . initial setup = 6 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . payload setup = 153 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . stage-in = 0 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . payload execution = 18358 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . stage-out = 5 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,106 | INFO     | . log creation = 1 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,107 | INFO     | ..............................
[2025-05-29 14:06:58] 2025-05-29 11:44:58,558 | INFO     | 
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | job summary report
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | --------------------------------------------------
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | PanDA job id: 6668443386
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | task id: 44871837
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | errors: (none)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | pilot state: finished 
[2025-05-29 14:06:58] 2025-05-29 11:44:58,559 | INFO     | transexitcode: 0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | exeerrorcode: 0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | exeerrordiag: 
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | exitcode: 0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | exitmsg: OK
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | cpuconsumptiontime: 68353 s
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | nevents: 400
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | neventsw: 0
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | pid: 31759
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | pgrp: 31759
[2025-05-29 14:06:58] 2025-05-29 11:44:58,560 | INFO     | corecount: 8
[2025-05-29 14:06:58] 2025-05-29 11:44:58,561 | INFO     | event service: False
[2025-05-29 14:06:58] 2025-05-29 11:44:58,561 | INFO     | sizes: {0: 2404355, 1: 2405211, 2: 2405239, 12: 2405239, 23: 2405267, 34: 2405295, 45: 2405451, 55: 2405479, 66: 2405507, 77: 2405535, 87: 2405797, 88: 2406105, 18
[2025-05-29 14:06:58] 2025-05-29 11:44:58,561 | INFO     | --------------------------------------------------
[2025-05-29 14:06:58] 2025-05-29 11:44:58,561 | INFO     | 
[2025-05-29 14:06:58] 2025-05-29 11:44:58,561 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-29 14:06:58] 2025-05-29 11:44:58,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | job 6668443386 has completed (purged errors)
[2025-05-29 14:06:58] 2025-05-29 11:44:58,994 | INFO     | overall cleanup function is called
[2025-05-29 14:06:58] 2025-05-29 11:45:00,003 | INFO     | --- collectZombieJob: --- 10, [31759]
[2025-05-29 14:06:58] 2025-05-29 11:45:00,004 | INFO     | zombie collector waiting for pid 31759
[2025-05-29 14:06:58] 2025-05-29 11:45:00,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:06:58] 2025-05-29 11:45:00,004 | INFO     | collected zombie processes
[2025-05-29 14:06:58] 2025-05-29 11:45:00,004 | INFO     | will attempt to kill all subprocesses of pid=31759
[2025-05-29 14:06:58] 2025-05-29 11:45:00,134 | INFO     | process IDs to be killed: [31759] (in reverse order)
[2025-05-29 14:06:58] 2025-05-29 11:45:01,054 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:06:58] 2025-05-29 11:45:01,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:06:58] 2025-05-29 11:45:01,058 | INFO     | did not find any defunct processes belonging to 31759
[2025-05-29 14:06:58] 2025-05-29 11:45:01,061 | INFO     | did not find any defunct processes belonging to 31759
[2025-05-29 14:06:58] 2025-05-29 11:45:01,061 | INFO     | ready for new job
[2025-05-29 14:06:58] 2025-05-29 11:45:01,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:06:58] 2025-05-29 11:45:01,063 | INFO     | **************************************
[2025-05-29 14:06:58] 2025-05-29 11:45:01,063 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:06:58] 2025-05-29 11:45:01,063 | INFO     | **************************************
[2025-05-29 14:06:58] 2025-05-29 11:45:01,063 | INFO     | 
[2025-05-29 14:06:58] 2025-05-29 11:45:01,064 | INFO     | pilot is running in a VM
[2025-05-29 14:06:58] 2025-05-29 11:45:01,069 | INFO     | architecture information:
[2025-05-29 14:06:58] 2025-05-29 11:45:01,080 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:06:58] 2025-05-29 11:45:01,315 | INFO     | cat /etc/os-release:
[2025-05-29 14:06:58] NAME="CentOS Linux"
[2025-05-29 14:06:58] VERSION="7 (Core)"
[2025-05-29 14:06:58] ID="centos"
[2025-05-29 14:06:58] ID_LIKE="rhel fedora"
[2025-05-29 14:06:58] VERSION_ID="7"
[2025-05-29 14:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:06:58] ANSI_COLOR="0;31"
[2025-05-29 14:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:06:58] HOME_URL="https://www.centos.org/"
[2025-05-29 14:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:06:58] 
[2025-05-29 14:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:06:58] 
[2025-05-29 14:06:58] 2025-05-29 11:45:01,315 | INFO     | **************************************
[2025-05-29 14:06:58] 2025-05-29 11:45:01,818 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-29 14:06:58] 2025-05-29 11:45:01,997 | INFO     | sufficient remaining disk space (496050896896 B)
[2025-05-29 14:06:58] 2025-05-29 11:45:01,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:06:58] 2025-05-29 11:45:01,998 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:06:58] 2025-05-29 11:45:01,998 | INFO     | update_server=False
[2025-05-29 14:06:58] 2025-05-29 11:45:01,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:06:58] 2025-05-29 11:45:02,002 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 14:06:58] 2025-05-29 11:45:02,003 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:06:58] 2025-05-29 11:45:02,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:06:58] 2025-05-29 11:45:02,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:06:58] 2025-05-29 11:45:02,363 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 14:06:58] 2025-05-29 11:45:02,364 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 14:06:58] 2025-05-29 11:45:02,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:06:58] 2025-05-29 11:45:02,364 | INFO     | will abort loop
[2025-05-29 14:06:58] 2025-05-29 11:45:02,620 | INFO     | all data control threads have been joined
[2025-05-29 14:06:58] 2025-05-29 11:45:02,844 | INFO     | all job control threads have been joined
[2025-05-29 14:06:58] 2025-05-29 11:45:03,003 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:06:58] 2025-05-29 11:45:03,200 | INFO     | [job] validate thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,209 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,226 | INFO     | all payload control threads have been joined
[2025-05-29 14:06:58] 2025-05-29 11:45:03,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:06:58] 2025-05-29 11:45:03,369 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,470 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,626 | INFO     | [data] control thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,648 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,789 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,850 | INFO     | [job] control thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:03,899 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:04,068 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:04,232 | INFO     | [payload] control thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:04,293 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:05,042 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:05,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:06:58] 2025-05-29 11:45:09,271 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:06:58] 2025-05-29 11:45:10,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010714629952)>', '<ExcThread(monitor, started 140010263131904)>']
[2025-05-29 14:06:58] 2025-05-29 11:45:11,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:06:58] 2025-05-29 11:45:11,056 | INFO     | [monitor] control thread has ended
[2025-05-29 14:06:58] 2025-05-29 11:45:15,160 | INFO     | all workflow threads have been joined
[2025-05-29 14:06:58] 2025-05-29 11:45:15,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:06:58] 2025-05-29 11:45:15,161 | INFO     | traces error code: 0
[2025-05-29 14:06:58] 2025-05-29 11:45:15,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:06:58] 2025-05-29 11:45:15,526 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:06:58] 2025-05-29 11:45:15,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:06:58] 2025-05-29 11:45:15,629 [wrapper] pilotpid: 19193
[2025-05-29 14:06:58] 2025-05-29 11:45:15,693 [wrapper] Pilot exit status: 0
[2025-05-29 14:06:58] 2025-05-29 11:45:15,940 [wrapper] pandaids: 6668443386
[2025-05-29 14:06:58] 2025-05-29 11:45:16,088 [wrapper] cleanup supervisor_pilot   465 19194
[2025-05-29 14:06:58] 2025-05-29 11:45:16,100 [wrapper] Test setup, not cleaning
[2025-05-29 14:06:58] 2025-05-29 11:45:16,150 [wrapper] apfmon messages muted
[2025-05-29 14:06:58] 2025-05-29 11:45:16,204 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:06:58] 2025-05-29 11:45:16,246 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:06:58]  *** Error codes and diagnostics ***
[2025-05-29 14:06:58]     "exeErrorCode": 0,
[2025-05-29 14:06:58]     "exeErrorDiag": "",
[2025-05-29 14:06:58]     "pilotErrorCode": 0,
[2025-05-29 14:06:58]     "pilotErrorDiag": "",
[2025-05-29 14:06:58]  *** Listing of results directory ***
[2025-05-29 14:06:58] total 409764
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc    495897 May 28 15:01 pilot3.tar.gz
[2025-05-29 14:06:58] -rwx------. 1 boinc boinc     37140 May 28 15:10 runpilot2-wrapper.sh
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc      5111 May 28 15:10 queuedata.json
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc       100 May 29 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:06:58] -rwxr-xr-x. 1 boinc boinc      7986 May 29 08:28 run_atlas
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc       105 May 29 08:28 job.xml
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc 221801368 May 29 08:28 EVNT.44871834._003306.pool.root.1
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc      6371 May 29 08:28 init_data.xml
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc     15093 May 29 08:28 start_atlas.sh
[2025-05-29 14:06:58] drwxrwx--x. 2 boinc boinc        68 May 29 08:28 shared
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc    508881 May 29 08:28 input.tar.gz
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc         0 May 29 08:28 boinc_lockfile
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc      2558 May 29 08:28 pandaJob.out
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc    993147 May 29 08:31 agis_schedconf.cvmfs.json
[2025-05-29 14:06:58] drwx------. 4 boinc boinc      4096 May 29 08:31 pilot3
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc 189950134 May 29 13:42 HITS.44871837._084729.pool.root.1
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc       531 May 29 13:42 boinc_task_state.xml
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc      1030 May 29 13:43 memory_monitor_summary.json
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc   1603667 May 29 13:43 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc    421757 May 29 13:43 log.44871837._084729.job.log.tgz.1
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc        95 May 29 13:44 pilot_heartbeat.json
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc      7694 May 29 13:44 heartbeat.json
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc      4725 May 29 13:45 pilotlog.txt
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc   1590635 May 29 13:45 log.44871837._084729.job.log.1
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc       357 May 29 13:45 output.list
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc       620 May 29 13:45 runtime_log
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc   2027520 May 29 13:45 result.tar.gz
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc      8659 May 29 13:45 runtime_log.err
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc       657 May 29 13:45 ApKMDmVjVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKDcKDmmi8GGo.diag
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc      8192 May 29 14:06 boinc_mmap_file
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc        28 May 29 14:06 wrapper_checkpoint.txt
[2025-05-29 14:06:58] -rw-r--r--. 1 boinc boinc     20521 May 29 14:06 stderr.txt
[2025-05-29 14:06:58] HITS file was successfully produced:
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc 189950134 May 29 13:42 shared/HITS.pool.root.1
[2025-05-29 14:06:58]  *** Contents of shared directory: ***
[2025-05-29 14:06:58] total 404600
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc 221801368 May 29 08:28 ATLAS.root_0
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc     15093 May 29 08:28 start_atlas.sh
[2025-05-29 14:06:58] -rw-r--r--. 2 boinc boinc    508881 May 29 08:28 input.tar.gz
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc 189950134 May 29 13:42 HITS.pool.root.1
[2025-05-29 14:06:58] -rw-------. 1 boinc boinc   2027520 May 29 13:45 result.tar.gz
14:07:00 (11564): run_atlas exited; CPU time 68614.253624
14:07:00 (11564): called boinc_finish(0)

</stderr_txt>
]]>

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