Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:31 (2484272): wrapper (7.7.26015): starting
11:47:31 (2484272): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 11:47:31] Arguments: --nthreads 12
[2025-05-28 11:47:31] Threads: 12
[2025-05-28 11:47:31] Checking for CVMFS
[2025-05-28 11:47:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 11:47:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 11:47:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 11:47:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 11:47:31] 2.11.5.0 1853674 23344 227688 146528 3 528 30750822 45568001 16388 130560 0 271481511 99.787 173371697 29801 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 11:47:31] CVMFS is ok
[2025-05-28 11:47:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 11:47:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 11:47:31] Further information can be found at the LHC@home message board.
[2025-05-28 11:47:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 11:47:31] Checking for apptainer binary...
[2025-05-28 11:47:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 11:47:31] Running /usr/bin/apptainer --version
[2025-05-28 11:47:32] apptainer version 1.4.0-1.el9
[2025-05-28 11:47:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 11:47:32] wns0050.triumf.lcg
[2025-05-28 11:47:32] apptainer works
[2025-05-28 11:47:32] Set ATHENA_PROC_NUMBER=12
[2025-05-28 11:47:32] Set ATHENA_CORE_NUMBER=12
[2025-05-28 11:47:32] Starting ATLAS job with PandaID=6668687846
[2025-05-28 11:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 11:50:38]  *** The last 200 lines of the pilot log: ***
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard info from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | found no stored workdir sizes
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | wrong length of table data, x=[1748458088.0], y=[1327.0] (must be same and length>=4)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . Timing measurements:
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . get job = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . initial setup = 3 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload setup = 6 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-in = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload execution = 18 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-out = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . log creation = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668687846/pilotlog.txt
[2025-05-28 11:50:38] 2025-05-28 18:50:24,313 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 11:50:38] - Log from pilotlog.txt -
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard info from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | found no stored workdir sizes
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | wrong length of table data, x=[1748458088.0], y=[1327.0] (must be same and length>=4)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . Timing measurements:
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . get job = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . initial setup = 3 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload setup = 6 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-in = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload execution = 18 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-out = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . log creation = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668687846/pilotlog.txt
[2025-05-28 11:50:38] 2025-05-28 18:50:24,313 | WARNING  | 
[2025-05-28 11:50:38] [begin log extracts]
[2025-05-28 11:50:38] - Log from pilotlog.txt -
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard info from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 11:50:38] 2025-05-28 18:50:24,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | found no stored workdir sizes
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | WARNING  | wrong length of table data, x=[1748458088.0], y=[1327.0] (must be same and length>=4)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,287 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . Timing measurements:
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . get job = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . initial setup = 3 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload setup = 6 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-in = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . payload execution = 18 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . stage-out = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | . log creation = 0 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | ..............................
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 11:50:38] 2025-05-28 18:50:24,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668687846/pilotlog.txt
[2025-05-28 11:50:38] [end log extracts]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,313 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,314 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | 
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | job summary report
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | --------------------------------------------------
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | PanDA job id: 6668687846
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | task id: 44871837
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 11:48:16,705 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | pilot state: failed 
[2025-05-28 11:50:38] 2025-05-28 18:50:24,689 | INFO     | transexitcode: 65
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | exeerrorcode: 65
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | exitcode: 65
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | nevents: 0
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | neventsw: 0
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | pid: 2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | pgrp: 2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | corecount: 12
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | event service: False
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | sizes: {0: 2405060, 1: 2405259, 5: 2405465, 11: 2405521, 28: 2433113, 29: 2433113, 148: 2433383}
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | --------------------------------------------------
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | 
[2025-05-28 11:50:38] 2025-05-28 18:50:24,690 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | job 6668687846 has completed (purged errors)
[2025-05-28 11:50:38] 2025-05-28 18:50:24,706 | INFO     | overall cleanup function is called
[2025-05-28 11:50:38] 2025-05-28 18:50:25,713 | INFO     | --- collectZombieJob: --- 10, [2494137]
[2025-05-28 11:50:38] 2025-05-28 18:50:25,713 | INFO     | zombie collector waiting for pid 2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:25,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 11:50:38] 2025-05-28 18:50:25,713 | INFO     | collected zombie processes
[2025-05-28 11:50:38] 2025-05-28 18:50:25,713 | INFO     | will attempt to kill all subprocesses of pid=2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:25,864 | INFO     | process IDs to be killed: [2494137] (in reverse order)
[2025-05-28 11:50:38] 2025-05-28 18:50:25,966 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 11:50:38] 2025-05-28 18:50:25,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 11:50:38] 2025-05-28 18:50:25,972 | INFO     | did not find any defunct processes belonging to 2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:25,979 | INFO     | did not find any defunct processes belonging to 2494137
[2025-05-28 11:50:38] 2025-05-28 18:50:25,979 | INFO     | ready for new job
[2025-05-28 11:50:38] 2025-05-28 18:50:25,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 11:50:38] 2025-05-28 18:50:25,981 | INFO     | **************************************
[2025-05-28 11:50:38] 2025-05-28 18:50:25,981 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 11:50:38] 2025-05-28 18:50:25,981 | INFO     | **************************************
[2025-05-28 11:50:38] 2025-05-28 18:50:25,981 | INFO     | 
[2025-05-28 11:50:38] 2025-05-28 18:50:25,983 | INFO     | architecture information:
[2025-05-28 11:50:38] 2025-05-28 18:50:25,983 | INFO     | executing command: cat /etc/os-release
[2025-05-28 11:50:38] 2025-05-28 18:50:25,994 | INFO     | cat /etc/os-release:
[2025-05-28 11:50:38] NAME="CentOS Linux"
[2025-05-28 11:50:38] VERSION="7 (Core)"
[2025-05-28 11:50:38] ID="centos"
[2025-05-28 11:50:38] ID_LIKE="rhel fedora"
[2025-05-28 11:50:38] VERSION_ID="7"
[2025-05-28 11:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 11:50:38] ANSI_COLOR="0;31"
[2025-05-28 11:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 11:50:38] HOME_URL="https://www.centos.org/"
[2025-05-28 11:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 11:50:38] 
[2025-05-28 11:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 11:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 11:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 11:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 11:50:38] 
[2025-05-28 11:50:38] 2025-05-28 18:50:25,994 | INFO     | **************************************
[2025-05-28 11:50:38] 2025-05-28 18:50:26,498 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 11:50:38] 2025-05-28 18:50:26,508 | INFO     | sufficient remaining disk space (1598014095360 B)
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | INFO     | update_server=False
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:50:38] 2025-05-28 18:50:26,509 | INFO     | aborting loop
[2025-05-28 11:50:38] 2025-05-28 18:50:26,602 | INFO     | all payload control threads have been joined
[2025-05-28 11:50:38] 2025-05-28 18:50:26,700 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 11:50:38] 2025-05-28 18:50:26,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 11:50:38] 2025-05-28 18:50:26,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 11:50:38] 2025-05-28 18:50:26,854 | INFO     | all data control threads have been joined
[2025-05-28 11:50:38] 2025-05-28 18:50:27,515 | INFO     | [job] job monitor thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,515 | INFO     | [job] retrieve thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,523 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 11:50:38] 2025-05-28 18:50:27,607 | INFO     | [payload] control thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,859 | INFO     | [data] control thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,919 | INFO     | [payload] validate_post thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:27,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 11:50:38] 2025-05-28 18:50:28,079 | INFO     | all job control threads have been joined
[2025-05-28 11:50:38] 2025-05-28 18:50:28,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:28,378 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:28,592 | INFO     | [data] copytool_in thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:28,700 | INFO     | [payload] failed_post thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:28,791 | INFO     | [job] validate thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:28,898 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:29,084 | INFO     | [job] control thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:29,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:50:38] 2025-05-28 18:50:29,581 | INFO     | [data] copytool_out thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:30,391 | INFO     | [job] queue monitor thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:31,942 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 11:50:38] 2025-05-28 18:50:33,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589080168256)>', '<ExcThread(monitor, started 140588548605696)>']
[2025-05-28 11:50:38] 2025-05-28 18:50:33,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 11:50:38] 2025-05-28 18:50:33,736 | INFO     | [monitor] control thread has ended
[2025-05-28 11:50:38] 2025-05-28 18:50:38,744 | INFO     | all workflow threads have been joined
[2025-05-28 11:50:38] 2025-05-28 18:50:38,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 11:50:38] 2025-05-28 18:50:38,744 | INFO     | traces error code: 0
[2025-05-28 11:50:38] 2025-05-28 18:50:38,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 11:50:38] 2025-05-28 18:50:38,860 [wrapper] ==== pilot stdout END ====
[2025-05-28 11:50:38] 2025-05-28 18:50:38,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 11:50:38] 2025-05-28 18:50:38,865 [wrapper] pilotpid: 2487832
[2025-05-28 11:50:38] 2025-05-28 18:50:38,866 [wrapper] Pilot exit status: 0
[2025-05-28 11:50:38] 2025-05-28 18:50:38,873 [wrapper] pandaids: 6668687846
[2025-05-28 11:50:38] 2025-05-28 18:50:38,910 [wrapper] cleanup supervisor_pilot 2487838 2487833
[2025-05-28 11:50:38] 2025-05-28 18:50:38,912 [wrapper] Test setup, not cleaning
[2025-05-28 11:50:38] 2025-05-28 18:50:38,913 [wrapper] apfmon messages muted
[2025-05-28 11:50:38] 2025-05-28 18:50:38,915 [wrapper] ==== wrapper stdout END ====
[2025-05-28 11:50:38] 2025-05-28 18:50:38,917 [wrapper] ==== wrapper stderr END ====
[2025-05-28 11:50:38]  *** Error codes and diagnostics ***
[2025-05-28 11:50:38]     "exeErrorCode": 65,
[2025-05-28 11:50:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 11:50:38]     "pilotErrorCode": 1305,
[2025-05-28 11:50:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 11:50:38]  *** Listing of results directory ***
[2025-05-28 11:50:38] total 224372
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc    495897 May 28 08:15 pilot3.tar.gz
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc      5111 May 28 08:57 queuedata.json
[2025-05-28 11:50:38] -rwx------. 1 boinc boinc     37140 May 28 08:58 runpilot2-wrapper.sh
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc       100 May 28 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 11:50:38] -rwxr-xr-x. 1 boinc boinc      7986 May 28 11:47 run_atlas
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc       105 May 28 11:47 job.xml
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc      6601 May 28 11:47 init_data.xml
[2025-05-28 11:50:38] -rw-r--r--. 2 boinc boinc 225722918 May 28 11:47 EVNT.44871834._003371.pool.root.1
[2025-05-28 11:50:38] -rw-r--r--. 2 boinc boinc     15093 May 28 11:47 start_atlas.sh
[2025-05-28 11:50:38] drwxrwx--x. 2 boinc boinc      4096 May 28 11:47 shared
[2025-05-28 11:50:38] -rw-r--r--. 2 boinc boinc    508883 May 28 11:47 input.tar.gz
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc         0 May 28 11:47 boinc_lockfile
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc      2559 May 28 11:47 pandaJob.out
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc    992485 May 28 11:47 agis_schedconf.cvmfs.json
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc   1603667 May 28 11:47 agis_ddmendpoints.agis.ALL.json
[2025-05-28 11:50:38] drwx------. 4 boinc boinc      4096 May 28 11:47 pilot3
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc       522 May 28 11:48 boinc_task_state.xml
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc       952 May 28 11:48 memory_monitor_summary.json
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc     20565 May 28 11:48 log.44871837._086558.job.log.tgz.1
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc        95 May 28 11:49 pilot_heartbeat.json
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc      8350 May 28 11:50 heartbeat.json
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc      8192 May 28 11:50 boinc_mmap_file
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc        22 May 28 11:50 wrapper_checkpoint.txt
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc      4352 May 28 11:50 pilotlog.txt
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc     73540 May 28 11:50 log.44871837._086558.job.log.1
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc       188 May 28 11:50 output.list
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc       620 May 28 11:50 runtime_log
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc    112640 May 28 11:50 result.tar.gz
[2025-05-28 11:50:38] -rw-------. 1 boinc boinc       644 May 28 11:50 cc4MDmPLYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfUcKDmDbLu9m.diag
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc      8484 May 28 11:50 runtime_log.err
[2025-05-28 11:50:38] -rw-r--r--. 1 boinc boinc     21438 May 28 11:50 stderr.txt
[2025-05-28 11:50:39] No HITS result produced
[2025-05-28 11:50:39]  *** Contents of shared directory: ***
[2025-05-28 11:50:39] total 221068
[2025-05-28 11:50:39] -rw-r--r--. 2 boinc boinc 225722918 May 28 11:47 ATLAS.root_0
[2025-05-28 11:50:39] -rw-r--r--. 2 boinc boinc     15093 May 28 11:47 start_atlas.sh
[2025-05-28 11:50:39] -rw-r--r--. 2 boinc boinc    508883 May 28 11:47 input.tar.gz
[2025-05-28 11:50:39] -rw-------. 1 boinc boinc    112640 May 28 11:50 result.tar.gz
11:50:40 (2484272): run_atlas exited; CPU time 19.676292
11:50:40 (2484272): called boinc_finish(0)

</stderr_txt>
]]>

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