Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:01:03 (4305): wrapper (7.7.26015): starting
07:01:03 (4305): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 07:01:03] Arguments: --nthreads 8
[2025-05-29 07:01:03] Threads: 8
[2025-05-29 07:01:03] Checking for CVMFS
[2025-05-29 07:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:01:04] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:01:05] 2.11.2.0 18345 24216 96876 146543 3 154 18937057 25165824 4643 130560 0 13352768 99.836 14650062 1710 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 07:01:05] CVMFS is ok
[2025-05-29 07:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:01:05] Checking for apptainer binary...
[2025-05-29 07:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:01:05] Running /usr/bin/apptainer --version
[2025-05-29 07:01:05] apptainer version 1.3.2-1.el7
[2025-05-29 07:01:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:01:15] cg-vwn239.simple-grid.lan
[2025-05-29 07:01:15] apptainer works
[2025-05-29 07:01:15] Set ATHENA_PROC_NUMBER=8
[2025-05-29 07:01:15] Set ATHENA_CORE_NUMBER=8
[2025-05-29 07:01:15] Starting ATLAS job with PandaID=6668313105
[2025-05-29 07:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 12:39:08]  *** The last 200 lines of the pilot log: ***
[2025-05-29 12:39:08] 2025-05-29 10:15:46,416 | INFO     | extracted standard info from prmon json
[2025-05-29 12:39:08] 2025-05-29 10:15:46,416 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 12:39:08] 2025-05-29 10:15:46,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 12:39:08] 2025-05-29 10:15:46,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 12:39:08] 2025-05-29 10:15:46,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 12:39:08] 2025-05-29 10:15:46,423 | INFO     | fitting pss+swap vs Time
[2025-05-29 12:39:08] 2025-05-29 10:15:46,424 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,427 | INFO     | sum of deviations: 90476096090.00005
[2025-05-29 12:39:08] 2025-05-29 10:15:46,427 | INFO     | mean x: 1748504576.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,427 | INFO     | mean y: 2465690.8316498315
[2025-05-29 12:39:08] 2025-05-29 10:15:46,427 | INFO     | -- intersect: -19471651446.2553
[2025-05-29 12:39:08] 2025-05-29 10:15:46,428 | INFO     | intersect: -19471651446.2553
[2025-05-29 12:39:08] 2025-05-29 10:15:46,428 | INFO     | chi2: 7.354820458725797
[2025-05-29 12:39:08] 2025-05-29 10:15:46,429 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,432 | INFO     | sum of deviations: 108609498654.5
[2025-05-29 12:39:08] 2025-05-29 10:15:46,432 | INFO     | mean x: 1748504423.5
[2025-05-29 12:39:08] 2025-05-29 10:15:46,432 | INFO     | mean y: 2472443.729452055
[2025-05-29 12:39:08] 2025-05-29 10:15:46,432 | INFO     | -- intersect: -24596256080.535694
[2025-05-29 12:39:08] 2025-05-29 10:15:46,432 | INFO     | intersect: -24596256080.535694
[2025-05-29 12:39:08] 2025-05-29 10:15:46,433 | INFO     | chi2: 6.636283395291405
[2025-05-29 12:39:08] 2025-05-29 10:15:46,433 | INFO     | current chi2=6.636283395291405 (change=9.769607123201986 %)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,433 | INFO     | right removable region: 291
[2025-05-29 12:39:08] 2025-05-29 10:15:46,434 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,437 | INFO     | sum of deviations: -13619698749.999987
[2025-05-29 12:39:08] 2025-05-29 10:15:46,437 | INFO     | mean x: 1748504728.5
[2025-05-29 12:39:08] 2025-05-29 10:15:46,437 | INFO     | mean y: 2505021.4246575343
[2025-05-29 12:39:08] 2025-05-29 10:15:46,437 | INFO     | -- intersect: 3087201431.263516
[2025-05-29 12:39:08] 2025-05-29 10:15:46,437 | INFO     | intersect: 3087201431.263516
[2025-05-29 12:39:08] 2025-05-29 10:15:46,438 | INFO     | chi2: 2.558228415152945
[2025-05-29 12:39:08] 2025-05-29 10:15:46,438 | INFO     | current chi2=2.558228415152945 (change=65.21698348029898 %)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,439 | INFO     | sum of square deviations: 7330250928.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,442 | INFO     | sum of deviations: -67747426855.000015
[2025-05-29 12:39:08] 2025-05-29 10:15:46,442 | INFO     | mean x: 1748504881.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,442 | INFO     | mean y: 2526096.3902439023
[2025-05-29 12:39:08] 2025-05-29 10:15:46,442 | INFO     | -- intersect: 16162505842.605831
[2025-05-29 12:39:08] 2025-05-29 10:15:46,442 | INFO     | intersect: 16162505842.605831
[2025-05-29 12:39:08] 2025-05-29 10:15:46,443 | INFO     | chi2: 1.00845584179436
[2025-05-29 12:39:08] 2025-05-29 10:15:46,443 | INFO     | current chi2=1.00845584179436 (change=60.57991398183774 %)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,443 | INFO     | sum of square deviations: 6953769450.5
[2025-05-29 12:39:08] 2025-05-29 10:15:46,446 | INFO     | sum of deviations: -75298249330.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,446 | INFO     | mean x: 1748505033.5
[2025-05-29 12:39:08] 2025-05-29 10:15:46,447 | INFO     | mean y: 2529152.6028368794
[2025-05-29 12:39:08] 2025-05-29 10:15:46,447 | INFO     | -- intersect: 18936054185.961002
[2025-05-29 12:39:08] 2025-05-29 10:15:46,447 | INFO     | intersect: 18936054185.961002
[2025-05-29 12:39:08] 2025-05-29 10:15:46,447 | INFO     | chi2: 0.9628713216472873
[2025-05-29 12:39:08] 2025-05-29 10:15:46,447 | INFO     | current chi2=0.9628713216472873 (change=4.520229667762509 %)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,448 | INFO     | left removable region: 30
[2025-05-29 12:39:08] 2025-05-29 10:15:46,448 | INFO     | sum of square deviations: 5513070810.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,451 | INFO     | sum of deviations: -36614953417.99999
[2025-05-29 12:39:08] 2025-05-29 10:15:46,451 | INFO     | mean x: 1748505308.0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,451 | INFO     | mean y: 2529004.888888889
[2025-05-29 12:39:08] 2025-05-29 10:15:46,451 | INFO     | -- intersect: 11615193273.125584
[2025-05-29 12:39:08] 2025-05-29 10:15:46,451 | INFO     | intersect: 11615193273.125584
[2025-05-29 12:39:08] 2025-05-29 10:15:46,452 | INFO     | chi2: 0.15516955865848936
[2025-05-29 12:39:08] 2025-05-29 10:15:46,452 | INFO     | -- intersect: 11615193273.125584
[2025-05-29 12:39:08] 2025-05-29 10:15:46,452 | INFO     | current memory leak: -6.64 B/s (using 261 data points, chi2=0.16)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,453 | INFO     | ..............................
[2025-05-29 12:39:08] 2025-05-29 10:15:46,453 | INFO     | . Timing measurements:
[2025-05-29 12:39:08] 2025-05-29 10:15:46,453 | INFO     | . get job = 0 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,453 | INFO     | . initial setup = 3 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | . payload setup = 157 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | . stage-in = 0 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | . payload execution = 18244 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | . stage-out = 3 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | . log creation = 1 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,454 | INFO     | ..............................
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | 
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | job summary report
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | --------------------------------------------------
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | PanDA job id: 6668313105
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | task id: 44871837
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | errors: (none)
[2025-05-29 12:39:08] 2025-05-29 10:15:46,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | pilot state: finished 
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | transexitcode: 0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | exeerrorcode: 0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | exeerrordiag: 
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | exitcode: 0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | exitmsg: OK
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | cpuconsumptiontime: 68195 s
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | nevents: 400
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | neventsw: 0
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | pid: 21064
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | pgrp: 21064
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | corecount: 8
[2025-05-29 12:39:08] 2025-05-29 10:15:46,618 | INFO     | event service: False
[2025-05-29 12:39:08] 2025-05-29 10:15:46,619 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405262, 13: 2405290, 23: 2405346, 34: 2405374, 45: 2405530, 56: 2405558, 66: 2405586, 77: 2405614, 84: 2405876, 88: 2406184, 18
[2025-05-29 12:39:08] 2025-05-29 10:15:46,619 | INFO     | --------------------------------------------------
[2025-05-29 12:39:08] 2025-05-29 10:15:46,619 | INFO     | 
[2025-05-29 12:39:08] 2025-05-29 10:15:46,619 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-29 12:39:08] 2025-05-29 10:15:47,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | job 6668313105 has completed (purged errors)
[2025-05-29 12:39:08] 2025-05-29 10:15:47,249 | INFO     | overall cleanup function is called
[2025-05-29 12:39:08] 2025-05-29 10:15:48,260 | INFO     | --- collectZombieJob: --- 10, [21064]
[2025-05-29 12:39:08] 2025-05-29 10:15:48,260 | INFO     | zombie collector waiting for pid 21064
[2025-05-29 12:39:08] 2025-05-29 10:15:48,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 12:39:08] 2025-05-29 10:15:48,260 | INFO     | collected zombie processes
[2025-05-29 12:39:08] 2025-05-29 10:15:48,260 | INFO     | will attempt to kill all subprocesses of pid=21064
[2025-05-29 12:39:08] 2025-05-29 10:15:48,386 | INFO     | process IDs to be killed: [21064] (in reverse order)
[2025-05-29 12:39:08] 2025-05-29 10:15:49,238 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 12:39:08] 2025-05-29 10:15:49,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 12:39:08] 2025-05-29 10:15:49,242 | INFO     | did not find any defunct processes belonging to 21064
[2025-05-29 12:39:08] 2025-05-29 10:15:49,245 | INFO     | did not find any defunct processes belonging to 21064
[2025-05-29 12:39:08] 2025-05-29 10:15:49,245 | INFO     | ready for new job
[2025-05-29 12:39:08] 2025-05-29 10:15:49,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 12:39:08] 2025-05-29 10:15:49,248 | INFO     | **************************************
[2025-05-29 12:39:08] 2025-05-29 10:15:49,248 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 12:39:08] 2025-05-29 10:15:49,248 | INFO     | **************************************
[2025-05-29 12:39:08] 2025-05-29 10:15:49,248 | INFO     | 
[2025-05-29 12:39:08] 2025-05-29 10:15:49,249 | INFO     | pilot is running in a VM
[2025-05-29 12:39:08] 2025-05-29 10:15:49,249 | INFO     | architecture information:
[2025-05-29 12:39:08] 2025-05-29 10:15:49,253 | INFO     | executing command: cat /etc/os-release
[2025-05-29 12:39:08] 2025-05-29 10:15:49,512 | INFO     | cat /etc/os-release:
[2025-05-29 12:39:08] NAME="CentOS Linux"
[2025-05-29 12:39:08] VERSION="7 (Core)"
[2025-05-29 12:39:08] ID="centos"
[2025-05-29 12:39:08] ID_LIKE="rhel fedora"
[2025-05-29 12:39:08] VERSION_ID="7"
[2025-05-29 12:39:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 12:39:08] ANSI_COLOR="0;31"
[2025-05-29 12:39:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 12:39:08] HOME_URL="https://www.centos.org/"
[2025-05-29 12:39:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 12:39:08] 
[2025-05-29 12:39:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 12:39:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 12:39:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 12:39:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 12:39:08] 
[2025-05-29 12:39:08] 2025-05-29 10:15:49,513 | INFO     | **************************************
[2025-05-29 12:39:08] 2025-05-29 10:15:50,017 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-29 12:39:08] 2025-05-29 10:15:50,268 | INFO     | sufficient remaining disk space (496274243584 B)
[2025-05-29 12:39:08] 2025-05-29 10:15:50,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 12:39:08] 2025-05-29 10:15:50,269 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 12:39:08] 2025-05-29 10:15:50,269 | INFO     | update_server=False
[2025-05-29 12:39:08] 2025-05-29 10:15:50,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 12:39:08] 2025-05-29 10:15:50,270 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 12:39:08] 2025-05-29 10:15:50,270 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 12:39:08] 2025-05-29 10:15:50,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 12:39:08] 2025-05-29 10:15:50,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 12:39:08] 2025-05-29 10:15:50,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 12:39:08] 2025-05-29 10:15:50,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 12:39:08] 2025-05-29 10:15:50,653 | INFO     | aborting loop
[2025-05-29 12:39:08] 2025-05-29 10:15:50,934 | INFO     | all job control threads have been joined
[2025-05-29 12:39:08] 2025-05-29 10:15:51,217 | INFO     | all data control threads have been joined
[2025-05-29 12:39:08] 2025-05-29 10:15:51,254 | INFO     | all payload control threads have been joined
[2025-05-29 12:39:08] 2025-05-29 10:15:51,274 | INFO     | [job] retrieve thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,499 | INFO     | [job] validate thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,567 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 12:39:08] 2025-05-29 10:15:51,659 | INFO     | [job] job monitor thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,684 | INFO     | [payload] failed_post thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,686 | INFO     | [data] copytool_in thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,706 | INFO     | [payload] validate_post thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,814 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:51,940 | INFO     | [job] control thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,071 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,223 | INFO     | [data] control thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,260 | INFO     | [payload] control thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,282 | INFO     | [data] copytool_out thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,636 | INFO     | [job] queue monitor thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:52,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 12:39:08] 2025-05-29 10:15:56,975 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 12:39:08] 2025-05-29 10:15:58,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515643156288)>', '<ExcThread(monitor, started 140515198617344)>']
[2025-05-29 12:39:08] 2025-05-29 10:15:58,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 12:39:08] 2025-05-29 10:15:58,317 | INFO     | [monitor] control thread has ended
[2025-05-29 12:39:08] 2025-05-29 10:16:03,190 | INFO     | all workflow threads have been joined
[2025-05-29 12:39:08] 2025-05-29 10:16:03,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 12:39:08] 2025-05-29 10:16:03,190 | INFO     | traces error code: 0
[2025-05-29 12:39:08] 2025-05-29 10:16:03,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 12:39:08] 2025-05-29 10:16:03,506 [wrapper] ==== pilot stdout END ====
[2025-05-29 12:39:08] 2025-05-29 10:16:03,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 12:39:08] 2025-05-29 10:16:03,700 [wrapper] pilotpid: 10435
[2025-05-29 12:39:08] 2025-05-29 10:16:03,758 [wrapper] Pilot exit status: 0
[2025-05-29 12:39:08] 2025-05-29 10:16:04,259 [wrapper] pandaids: 6668313105
[2025-05-29 12:39:08] 2025-05-29 10:16:05,302 [wrapper] cleanup supervisor_pilot 26203 10436
[2025-05-29 12:39:08] 2025-05-29 10:16:05,382 [wrapper] Test setup, not cleaning
[2025-05-29 12:39:08] 2025-05-29 10:16:05,431 [wrapper] apfmon messages muted
[2025-05-29 12:39:08] 2025-05-29 10:16:05,506 [wrapper] ==== wrapper stdout END ====
[2025-05-29 12:39:08] 2025-05-29 10:16:05,542 [wrapper] ==== wrapper stderr END ====
[2025-05-29 12:39:08]  *** Error codes and diagnostics ***
[2025-05-29 12:39:08]     "exeErrorCode": 0,
[2025-05-29 12:39:08]     "exeErrorDiag": "",
[2025-05-29 12:39:08]     "pilotErrorCode": 0,
[2025-05-29 12:39:08]     "pilotErrorDiag": "",
[2025-05-29 12:39:08]  *** Listing of results directory ***
[2025-05-29 12:39:08] total 416936
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc    495897 May 28 11:38 pilot3.tar.gz
[2025-05-29 12:39:08] -rwx------. 1 boinc boinc     37140 May 28 11:40 runpilot2-wrapper.sh
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc      5111 May 28 11:40 queuedata.json
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc       100 May 29 07:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 12:39:08] -rwxr-xr-x. 1 boinc boinc      7986 May 29 07:01 run_atlas
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc       105 May 29 07:01 job.xml
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc 223537997 May 29 07:01 EVNT.44871834._003208.pool.root.1
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc     15093 May 29 07:01 start_atlas.sh
[2025-05-29 12:39:08] drwxrwx--x. 2 boinc boinc        68 May 29 07:01 shared
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc    508874 May 29 07:01 input.tar.gz
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc      6372 May 29 07:01 init_data.xml
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc         0 May 29 07:01 boinc_lockfile
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc      2559 May 29 07:01 pandaJob.out
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc    993415 May 29 07:04 agis_schedconf.cvmfs.json
[2025-05-29 12:39:08] drwx------. 4 boinc boinc      4096 May 29 07:04 pilot3
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc 195555337 May 29 12:12 HITS.44871837._082195.pool.root.1
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc       531 May 29 12:12 boinc_task_state.xml
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc      1018 May 29 12:14 memory_monitor_summary.json
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc   1603667 May 29 12:14 agis_ddmendpoints.agis.ALL.json
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc    422484 May 29 12:14 log.44871837._082195.job.log.tgz.1
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc      7693 May 29 12:15 heartbeat.json
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc        95 May 29 12:15 pilot_heartbeat.json
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc      4539 May 29 12:16 pilotlog.txt
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc   1584866 May 29 12:16 log.44871837._082195.job.log.1
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc       357 May 29 12:16 output.list
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc       620 May 29 12:16 runtime_log
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc   2027520 May 29 12:16 result.tar.gz
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc      8659 May 29 12:16 runtime_log.err
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc       657 May 29 12:16 GxoLDm4RSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2nbKDmZa3DMn.diag
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc      8192 May 29 12:39 boinc_mmap_file
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc        28 May 29 12:39 wrapper_checkpoint.txt
[2025-05-29 12:39:08] -rw-r--r--. 1 boinc boinc     20508 May 29 12:39 stderr.txt
[2025-05-29 12:39:08] HITS file was successfully produced:
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc 195555337 May 29 12:12 shared/HITS.pool.root.1
[2025-05-29 12:39:08]  *** Contents of shared directory: ***
[2025-05-29 12:39:08] total 411772
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc 223537997 May 29 07:01 ATLAS.root_0
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc     15093 May 29 07:01 start_atlas.sh
[2025-05-29 12:39:08] -rw-r--r--. 2 boinc boinc    508874 May 29 07:01 input.tar.gz
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc 195555337 May 29 12:12 HITS.pool.root.1
[2025-05-29 12:39:08] -rw-------. 1 boinc boinc   2027520 May 29 12:16 result.tar.gz
12:39:10 (4305): run_atlas exited; CPU time 68442.309110
12:39:10 (4305): called boinc_finish(0)

</stderr_txt>
]]>

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