Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:08:05 (946787): wrapper (7.7.26015): starting
09:08:05 (946787): wrapper: running run_atlas (--nthreads 4)
[2025-06-02 09:08:05] Arguments: --nthreads 4
[2025-06-02 09:08:05] Threads: 4
[2025-06-02 09:08:05] Checking for CVMFS
[2025-06-02 09:08:05] No cvmfs_config command found, will try listing directly
[2025-06-02 09:08:05] CVMFS is ok
[2025-06-02 09:08:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 09:08:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 09:08:05] Further information can be found at the LHC@home message board.
[2025-06-02 09:08:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 09:08:05] Checking for apptainer binary...
[2025-06-02 09:08:05] which: no apptainer in ((null))
[2025-06-02 09:08:05] apptainer is not installed, using version from CVMFS
[2025-06-02 09:08:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 09:08:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-02 09:08:06] apptainer works
[2025-06-02 09:08:06] Set ATHENA_PROC_NUMBER=4
[2025-06-02 09:08:06] Set ATHENA_CORE_NUMBER=4
[2025-06-02 09:08:06] Starting ATLAS job with PandaID=6668440412
[2025-06-02 09:08:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 12:41:41]  *** The last 200 lines of the pilot log: ***
[2025-06-02 12:41:41] 2025-06-02 10:41:20,810 | INFO     | monitor loop #873: job 0:6668440412 is in state 'finished'
[2025-06-02 12:41:41] 2025-06-02 10:41:20,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 12:41:41] 2025-06-02 10:41:23,313 | INFO     | monitor loop #874: job 0:6668440412 is in state 'finished'
[2025-06-02 12:41:41] 2025-06-02 10:41:23,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 12:41:41] 2025-06-02 10:41:25,720 | INFO     | PID=950878 has CPU usage=20.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 12:41:41] 2025-06-02 10:41:25,721 | INFO     | .. there are 16 such processes running
[2025-06-02 12:41:41] 2025-06-02 10:41:25,819 | INFO     | monitor loop #875: job 0:6668440412 is in state 'finished'
[2025-06-02 12:41:41] 2025-06-02 10:41:25,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,081 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 12:41:41] 2025-06-02 10:41:26,082 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6668440412/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,084 | INFO     | extracted standard info from prmon json
[2025-06-02 12:41:41] 2025-06-02 10:41:26,085 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 12:41:41] 2025-06-02 10:41:26,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 12:41:41] 2025-06-02 10:41:26,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 12:41:41] 2025-06-02 10:41:26,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 12:41:41] 2025-06-02 10:41:26,089 | INFO     | fitting pss+swap vs Time
[2025-06-02 12:41:41] 2025-06-02 10:41:26,089 | INFO     | sum of square deviations: 2830787960.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,091 | INFO     | sum of deviations: 50782709840.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,091 | INFO     | mean x: 1748854470.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,091 | INFO     | mean y: 2327790.3684210526
[2025-06-02 12:41:41] 2025-06-02 10:41:26,091 | INFO     | -- intersect: -31371116761.938137
[2025-06-02 12:41:41] 2025-06-02 10:41:26,091 | INFO     | intersect: -31371116761.938137
[2025-06-02 12:41:41] 2025-06-02 10:41:26,092 | INFO     | chi2: 1.4923182239617752
[2025-06-02 12:41:41] 2025-06-02 10:41:26,092 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,093 | INFO     | sum of deviations: 49224287970.5
[2025-06-02 12:41:41] 2025-06-02 10:41:26,093 | INFO     | mean x: 1748854317.5
[2025-06-02 12:41:41] 2025-06-02 10:41:26,093 | INFO     | mean y: 2326592.387254902
[2025-06-02 12:41:41] 2025-06-02 10:41:26,093 | INFO     | -- intersect: -32699693869.412865
[2025-06-02 12:41:41] 2025-06-02 10:41:26,094 | INFO     | intersect: -32699693869.412865
[2025-06-02 12:41:41] 2025-06-02 10:41:26,094 | INFO     | chi2: 1.4920766190357746
[2025-06-02 12:41:41] 2025-06-02 10:41:26,094 | INFO     | current chi2=1.4920766190357746 (change=0.01618990655754057 %)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,094 | INFO     | right removable region: 203
[2025-06-02 12:41:41] 2025-06-02 10:41:26,094 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | sum of deviations: 19644552118.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | mean x: 1748854622.5
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | mean y: 2351479.4607843137
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | -- intersect: -13048455019.723282
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | intersect: -13048455019.723282
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | chi2: 0.004523974757419978
[2025-06-02 12:41:41] 2025-06-02 10:41:26,096 | INFO     | current chi2=0.004523974757419978 (change=99.69684919176221 %)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,097 | INFO     | sum of square deviations: 2443580700.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | sum of deviations: 17593706498.000004
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | mean x: 1748854775.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | mean y: 2353134.050251256
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | -- intersect: -12589347896.72636
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | intersect: -12589347896.72636
[2025-06-02 12:41:41] 2025-06-02 10:41:26,098 | INFO     | chi2: 0.0039887661968424385
[2025-06-02 12:41:41] 2025-06-02 10:41:26,099 | INFO     | current chi2=0.0039887661968424385 (change=11.83049396329455 %)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,099 | INFO     | left removable region: 20
[2025-06-02 12:41:41] 2025-06-02 10:41:26,099 | INFO     | sum of square deviations: 1900284932.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,100 | INFO     | sum of deviations: 13402708208.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,100 | INFO     | mean x: 1748854897.0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,100 | INFO     | mean y: 2355491.830601093
[2025-06-02 12:41:41] 2025-06-02 10:41:26,100 | INFO     | -- intersect: -12332316792.263948
[2025-06-02 12:41:41] 2025-06-02 10:41:26,100 | INFO     | intersect: -12332316792.263948
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | chi2: 0.0030313542993971572
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | -- intersect: -12332316792.263948
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | current memory leak: 7.05 B/s (using 183 data points, chi2=0.00)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | ..............................
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | . Timing measurements:
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | . get job = 0 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,101 | INFO     | . initial setup = 1 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | . payload setup = 7 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | . stage-in = 0 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | . payload execution = 12751 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | . stage-out = 1 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | . log creation = 0 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,102 | INFO     | ..............................
[2025-06-02 12:41:41] 2025-06-02 10:41:26,615 | INFO     | 
[2025-06-02 12:41:41] 2025-06-02 10:41:26,615 | INFO     | job summary report
[2025-06-02 12:41:41] 2025-06-02 10:41:26,615 | INFO     | --------------------------------------------------
[2025-06-02 12:41:41] 2025-06-02 10:41:26,616 | INFO     | PanDA job id: 6668440412
[2025-06-02 12:41:41] 2025-06-02 10:41:26,616 | INFO     | task id: 44871837
[2025-06-02 12:41:41] 2025-06-02 10:41:26,616 | INFO     | errors: (none)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 12:41:41] 2025-06-02 10:41:26,617 | INFO     | pilot state: finished 
[2025-06-02 12:41:41] 2025-06-02 10:41:26,617 | INFO     | transexitcode: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | exeerrorcode: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | exeerrordiag: 
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | exitcode: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | exitmsg: OK
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | cpuconsumptiontime: 48570 s
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | nevents: 400
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | neventsw: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | pid: 958378
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | pgrp: 958378
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | corecount: 4
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | event service: False
[2025-06-02 12:41:41] 2025-06-02 10:41:26,618 | INFO     | sizes: {0: 2405244, 6: 2405450, 11: 2405478, 12762: 2435732, 12763: 2435731, 12765: 2444934, 12773: 2445048}
[2025-06-02 12:41:41] 2025-06-02 10:41:26,619 | INFO     | --------------------------------------------------
[2025-06-02 12:41:41] 2025-06-02 10:41:26,619 | INFO     | 
[2025-06-02 12:41:41] 2025-06-02 10:41:26,619 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2025-06-02 12:41:41] 2025-06-02 10:41:26,646 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | job 6668440412 has completed (purged errors)
[2025-06-02 12:41:41] 2025-06-02 10:41:26,648 | INFO     | overall cleanup function is called
[2025-06-02 12:41:41] 2025-06-02 10:41:27,657 | INFO     | --- collectZombieJob: --- 10, [958378]
[2025-06-02 12:41:41] 2025-06-02 10:41:27,659 | INFO     | zombie collector waiting for pid 958378
[2025-06-02 12:41:41] 2025-06-02 10:41:27,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 12:41:41] 2025-06-02 10:41:27,659 | INFO     | collected zombie processes
[2025-06-02 12:41:41] 2025-06-02 10:41:27,659 | INFO     | will attempt to kill all subprocesses of pid=958378
[2025-06-02 12:41:41] 2025-06-02 10:41:28,370 | INFO     | process IDs to be killed: [958378] (in reverse order)
[2025-06-02 12:41:41] 2025-06-02 10:41:28,615 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 12:41:41] 2025-06-02 10:41:28,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 12:41:41] 2025-06-02 10:41:28,643 | INFO     | did not find any defunct processes belonging to 958378
[2025-06-02 12:41:41] 2025-06-02 10:41:28,665 | INFO     | did not find any defunct processes belonging to 958378
[2025-06-02 12:41:41] 2025-06-02 10:41:28,665 | INFO     | ready for new job
[2025-06-02 12:41:41] 2025-06-02 10:41:28,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 12:41:41] 2025-06-02 10:41:28,668 | INFO     | **************************************
[2025-06-02 12:41:41] 2025-06-02 10:41:28,668 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 12:41:41] 2025-06-02 10:41:28,668 | INFO     | **************************************
[2025-06-02 12:41:41] 2025-06-02 10:41:28,668 | INFO     | 
[2025-06-02 12:41:41] 2025-06-02 10:41:28,676 | INFO     | architecture information:
[2025-06-02 12:41:41] 2025-06-02 10:41:28,677 | INFO     | executing command: cat /etc/os-release
[2025-06-02 12:41:41] 2025-06-02 10:41:28,697 | INFO     | cat /etc/os-release:
[2025-06-02 12:41:41] NAME="CentOS Linux"
[2025-06-02 12:41:41] VERSION="7 (Core)"
[2025-06-02 12:41:41] ID="centos"
[2025-06-02 12:41:41] ID_LIKE="rhel fedora"
[2025-06-02 12:41:41] VERSION_ID="7"
[2025-06-02 12:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 12:41:41] ANSI_COLOR="0;31"
[2025-06-02 12:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 12:41:41] HOME_URL="https://www.centos.org/"
[2025-06-02 12:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 12:41:41] 
[2025-06-02 12:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 12:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 12:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 12:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 12:41:41] 
[2025-06-02 12:41:41] 2025-06-02 10:41:28,697 | INFO     | **************************************
[2025-06-02 12:41:41] 2025-06-02 10:41:29,200 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2025-06-02 12:41:41] 2025-06-02 10:41:29,225 | INFO     | sufficient remaining disk space (3250587697152 B)
[2025-06-02 12:41:41] 2025-06-02 10:41:29,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 12:41:41] 2025-06-02 10:41:29,226 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 12:41:41] 2025-06-02 10:41:29,226 | INFO     | update_server=False
[2025-06-02 12:41:41] 2025-06-02 10:41:29,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 12:41:41] 2025-06-02 10:41:29,227 | INFO     | all payload control threads have been joined
[2025-06-02 12:41:41] 2025-06-02 10:41:29,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 12:41:41] 2025-06-02 10:41:29,327 | INFO     | aborting loop
[2025-06-02 12:41:41] 2025-06-02 10:41:29,658 | INFO     | all job control threads have been joined
[2025-06-02 12:41:41] 2025-06-02 10:41:29,732 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 12:41:41] 2025-06-02 10:41:29,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 12:41:41] 2025-06-02 10:41:29,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 12:41:41] 2025-06-02 10:41:30,128 | INFO     | all data control threads have been joined
[2025-06-02 12:41:41] 2025-06-02 10:41:30,230 | INFO     | [job] retrieve thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:30,232 | INFO     | [payload] control thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:30,332 | INFO     | [job] job monitor thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:30,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 12:41:41] 2025-06-02 10:41:30,664 | INFO     | [job] control thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:30,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:30,727 | INFO     | [payload] failed_post thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,059 | INFO     | [data] copytool_in thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,074 | INFO     | [job] validate thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,111 | INFO     | [payload] validate_post thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,133 | INFO     | [data] control thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,194 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 12:41:41] 2025-06-02 10:41:31,483 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:31,514 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:32,217 | INFO     | [job] queue monitor thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:32,353 | INFO     | [data] copytool_out thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:32,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 12:41:41] 2025-06-02 10:41:36,444 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 12:41:41] 2025-06-02 10:41:36,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23165232744256)>', '<ExcThread(monitor, started 23164979447552)>']
[2025-06-02 12:41:41] 2025-06-02 10:41:36,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 12:41:41] 2025-06-02 10:41:36,763 | INFO     | [monitor] control thread has ended
[2025-06-02 12:41:41] 2025-06-02 10:41:41,481 | INFO     | all workflow threads have been joined
[2025-06-02 12:41:41] 2025-06-02 10:41:41,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 12:41:41] 2025-06-02 10:41:41,484 | INFO     | traces error code: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:41,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 12:41:41] 2025-06-02 10:41:41,676 [wrapper] ==== pilot stdout END ====
[2025-06-02 12:41:41] 2025-06-02 10:41:41,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 12:41:41] 2025-06-02 10:41:41,683 [wrapper] pilotpid: 950878
[2025-06-02 12:41:41] 2025-06-02 10:41:41,687 [wrapper] Pilot exit status: 0
[2025-06-02 12:41:41] 2025-06-02 10:41:41,702 [wrapper] pandaids: 6668440412
[2025-06-02 12:41:41] 2025-06-02 10:41:41,857 [wrapper] cleanup supervisor_pilot 1720908 950879
[2025-06-02 12:41:41] 2025-06-02 10:41:41,860 [wrapper] Test setup, not cleaning
[2025-06-02 12:41:41] 2025-06-02 10:41:41,864 [wrapper] apfmon messages muted
[2025-06-02 12:41:41] 2025-06-02 10:41:41,868 [wrapper] ==== wrapper stdout END ====
[2025-06-02 12:41:41] 2025-06-02 10:41:41,871 [wrapper] ==== wrapper stderr END ====
[2025-06-02 12:41:41]  *** Error codes and diagnostics ***
[2025-06-02 12:41:41]     "exeErrorCode": 0,
[2025-06-02 12:41:41]     "exeErrorDiag": "",
[2025-06-02 12:41:41]     "pilotErrorCode": 0,
[2025-06-02 12:41:41]     "pilotErrorDiag": "",
[2025-06-02 12:41:41]  *** Listing of results directory ***
[2025-06-02 12:41:41] total 422476
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc    495897 May 28 13:45 pilot3.tar.gz
[2025-06-02 12:41:41] -rwx------ 1 boinc boinc     37140 May 28 14:12 runpilot2-wrapper.sh
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc      5111 May 28 14:12 queuedata.json
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc       100 Jun  2 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 12:41:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 08:21 run_atlas
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc       105 Jun  2 08:21 job.xml
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc      6685 Jun  2 09:08 init_data.xml
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc 227499187 Jun  2 09:08 EVNT.44871834._003278.pool.root.1
[2025-06-02 12:41:41] drwxrwx--x 2 boinc boinc      4096 Jun  2 09:08 shared
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc    508877 Jun  2 09:08 input.tar.gz
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc     15093 Jun  2 09:08 start_atlas.sh
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc         0 Jun  2 09:08 boinc_lockfile
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc      2558 Jun  2 09:08 pandaJob.out
[2025-06-02 12:41:41] -rw------- 1 boinc boinc    988196 Jun  2 09:08 agis_schedconf.cvmfs.json
[2025-06-02 12:41:41] drwx------ 4 boinc boinc      4096 Jun  2 09:08 pilot3
[2025-06-02 12:41:41] -rw------- 1 boinc boinc 198258877 Jun  2 12:40 HITS.44871837._084022.pool.root.1
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc       530 Jun  2 12:40 boinc_task_state.xml
[2025-06-02 12:41:41] -rw------- 1 boinc boinc      1030 Jun  2 12:41 memory_monitor_summary.json
[2025-06-02 12:41:41] -rw------- 1 boinc boinc   1603667 Jun  2 12:41 agis_ddmendpoints.agis.ALL.json
[2025-06-02 12:41:41] -rw------- 1 boinc boinc    332255 Jun  2 12:41 log.44871837._084022.job.log.tgz.1
[2025-06-02 12:41:41] -rw------- 1 boinc boinc      7703 Jun  2 12:41 heartbeat.json
[2025-06-02 12:41:41] -rw------- 1 boinc boinc        95 Jun  2 12:41 pilot_heartbeat.json
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc      8192 Jun  2 12:41 boinc_mmap_file
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc        27 Jun  2 12:41 wrapper_checkpoint.txt
[2025-06-02 12:41:41] -rw------- 1 boinc boinc      4364 Jun  2 12:41 pilotlog.txt
[2025-06-02 12:41:41] -rw------- 1 boinc boinc   1172404 Jun  2 12:41 log.44871837._084022.job.log.1
[2025-06-02 12:41:41] -rw------- 1 boinc boinc       357 Jun  2 12:41 output.list
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc       620 Jun  2 12:41 runtime_log
[2025-06-02 12:41:41] -rw------- 1 boinc boinc   1525760 Jun  2 12:41 result.tar.gz
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc      9026 Jun  2 12:41 runtime_log.err
[2025-06-02 12:41:41] -rw------- 1 boinc boinc       666 Jun  2 12:41 jk7MDmQpUe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY5bKDmU23Zpn.diag
[2025-06-02 12:41:41] -rw-r--r-- 1 boinc boinc     20943 Jun  2 12:41 stderr.txt
[2025-06-02 12:41:41] HITS file was successfully produced:
[2025-06-02 12:41:41] -rw------- 1 boinc boinc 198258877 Jun  2 12:40 shared/HITS.pool.root.1
[2025-06-02 12:41:41]  *** Contents of shared directory: ***
[2025-06-02 12:41:41] total 417800
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc 227499187 Jun  2 09:08 ATLAS.root_0
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc    508877 Jun  2 09:08 input.tar.gz
[2025-06-02 12:41:41] -rw-r--r-- 2 boinc boinc     15093 Jun  2 09:08 start_atlas.sh
[2025-06-02 12:41:41] -rw------- 1 boinc boinc 198258877 Jun  2 12:40 HITS.pool.root.1
[2025-06-02 12:41:41] -rw------- 1 boinc boinc   1525760 Jun  2 12:41 result.tar.gz
12:41:43 (946787): run_atlas exited; CPU time 49335.279220
12:41:43 (946787): called boinc_finish(0)

</stderr_txt>
]]>

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