Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:55:58 (9002): wrapper (7.7.26015): starting
05:55:58 (9002): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 05:55:58] Arguments: --nthreads 8
[2025-05-29 05:55:58] Threads: 8
[2025-05-29 05:55:58] Checking for CVMFS
[2025-05-29 05:55:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 05:55:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 05:55:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 05:55:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 05:55:58] 2.11.2.0 896 24043 91108 146542 2 69 23155845 25165824 4096 130560 0 12844691 99.797 14740134 2011 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 05:55:58] CVMFS is ok
[2025-05-29 05:55:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 05:55:58] Checking for apptainer binary...
[2025-05-29 05:55:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 05:55:58] Running /usr/bin/apptainer --version
[2025-05-29 05:55:58] apptainer version 1.3.2-1.el7
[2025-05-29 05:55:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 05:55:59] cg-vwn277.simple-grid.lan
[2025-05-29 05:55:59] apptainer works
[2025-05-29 05:55:59] Set ATHENA_PROC_NUMBER=8
[2025-05-29 05:55:59] Set ATHENA_CORE_NUMBER=8
[2025-05-29 05:56:00] Starting ATLAS job with PandaID=6668232245
[2025-05-29 05:56:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 11:03:11]  *** The last 200 lines of the pilot log: ***
[2025-05-29 11:03:11] 2025-05-29 09:01:10,253 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6668232245/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,254 | INFO     | extracted standard info from prmon json
[2025-05-29 11:03:11] 2025-05-29 09:01:10,254 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 11:03:11] 2025-05-29 09:01:10,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 11:03:11] 2025-05-29 09:01:10,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 11:03:11] 2025-05-29 09:01:10,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 11:03:11] 2025-05-29 09:01:10,261 | INFO     | fitting pss+swap vs Time
[2025-05-29 11:03:11] 2025-05-29 09:01:10,262 | INFO     | sum of square deviations: 8205826414.5
[2025-05-29 11:03:11] 2025-05-29 09:01:10,265 | INFO     | sum of deviations: 23583780868.49999
[2025-05-29 11:03:11] 2025-05-29 09:01:10,265 | INFO     | mean x: 1748500093.5
[2025-05-29 11:03:11] 2025-05-29 09:01:10,265 | INFO     | mean y: 2481436.587248322
[2025-05-29 11:03:11] 2025-05-29 09:01:10,265 | INFO     | -- intersect: -5022758066.504088
[2025-05-29 11:03:11] 2025-05-29 09:01:10,265 | INFO     | intersect: -5022758066.504088
[2025-05-29 11:03:11] 2025-05-29 09:01:10,266 | INFO     | chi2: 2.272202270673619
[2025-05-29 11:03:11] 2025-05-29 09:01:10,266 | INFO     | sum of square deviations: 7799669962.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,269 | INFO     | sum of deviations: 42619165117.99999
[2025-05-29 11:03:11] 2025-05-29 09:01:10,270 | INFO     | mean x: 1748499941.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,270 | INFO     | mean y: 2488483.7406143346
[2025-05-29 11:03:11] 2025-05-29 09:01:10,270 | INFO     | -- intersect: -9551711637.207048
[2025-05-29 11:03:11] 2025-05-29 09:01:10,270 | INFO     | intersect: -9551711637.207048
[2025-05-29 11:03:11] 2025-05-29 09:01:10,271 | INFO     | chi2: 1.4980715168673815
[2025-05-29 11:03:11] 2025-05-29 09:01:10,271 | INFO     | current chi2=1.4980715168673815 (change=34.069623281237995 %)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,271 | INFO     | sum of square deviations: 7407141672.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,274 | INFO     | sum of deviations: 41615053939.00001
[2025-05-29 11:03:11] 2025-05-29 09:01:10,274 | INFO     | mean x: 1748499788.5
[2025-05-29 11:03:11] 2025-05-29 09:01:10,274 | INFO     | mean y: 2488093.590277778
[2025-05-29 11:03:11] 2025-05-29 09:01:10,275 | INFO     | -- intersect: -9820992573.158012
[2025-05-29 11:03:11] 2025-05-29 09:01:10,275 | INFO     | intersect: -9820992573.158012
[2025-05-29 11:03:11] 2025-05-29 09:01:10,275 | INFO     | chi2: 1.4985674969369993
[2025-05-29 11:03:11] 2025-05-29 09:01:10,275 | INFO     | current chi2=1.4985674969369993 (change=-0.03310790332994001 %)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,275 | INFO     | right removable region: 287
[2025-05-29 11:03:11] 2025-05-29 09:01:10,276 | INFO     | sum of square deviations: 7799669962.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,279 | INFO     | sum of deviations: -21272229331.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,279 | INFO     | mean x: 1748500246.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,279 | INFO     | mean y: 2498150.1365187713
[2025-05-29 11:03:11] 2025-05-29 09:01:10,279 | INFO     | -- intersect: 4771225339.803972
[2025-05-29 11:03:11] 2025-05-29 09:01:10,280 | INFO     | intersect: 4771225339.803972
[2025-05-29 11:03:11] 2025-05-29 09:01:10,280 | INFO     | chi2: 0.8713222295474741
[2025-05-29 11:03:11] 2025-05-29 09:01:10,280 | INFO     | current chi2=0.8713222295474741 (change=61.652963699875144 %)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,281 | INFO     | sum of square deviations: 7407141672.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,284 | INFO     | sum of deviations: -17565594739.5
[2025-05-29 11:03:11] 2025-05-29 09:01:10,284 | INFO     | mean x: 1748500398.5
[2025-05-29 11:03:11] 2025-05-29 09:01:10,284 | INFO     | mean y: 2496690.003472222
[2025-05-29 11:03:11] 2025-05-29 09:01:10,284 | INFO     | -- intersect: 4148961110.686319
[2025-05-29 11:03:11] 2025-05-29 09:01:10,284 | INFO     | intersect: 4148961110.686319
[2025-05-29 11:03:11] 2025-05-29 09:01:10,285 | INFO     | chi2: 0.8531260870744912
[2025-05-29 11:03:11] 2025-05-29 09:01:10,285 | INFO     | current chi2=0.8531260870744912 (change=2.0883367663456847 %)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,285 | INFO     | left removable region: 20
[2025-05-29 11:03:11] 2025-05-29 09:01:10,285 | INFO     | sum of square deviations: 5902093918.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,288 | INFO     | sum of deviations: 12910322735.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,288 | INFO     | mean x: 1748500368.0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,288 | INFO     | mean y: 2498979.4531835206
[2025-05-29 11:03:11] 2025-05-29 09:01:10,289 | INFO     | -- intersect: -3822195165.8401966
[2025-05-29 11:03:11] 2025-05-29 09:01:10,289 | INFO     | intersect: -3822195165.8401966
[2025-05-29 11:03:11] 2025-05-29 09:01:10,289 | INFO     | chi2: 0.0023135457767684124
[2025-05-29 11:03:11] 2025-05-29 09:01:10,289 | INFO     | -- intersect: -3822195165.8401966
[2025-05-29 11:03:11] 2025-05-29 09:01:10,290 | INFO     | current memory leak: 2.19 B/s (using 267 data points, chi2=0.00)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,290 | INFO     | ..............................
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . Timing measurements:
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . get job = 0 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . initial setup = 2 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . payload setup = 14 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . stage-in = 0 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . payload execution = 18147 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . stage-out = 4 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,291 | INFO     | . log creation = 1 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,292 | INFO     | ..............................
[2025-05-29 11:03:11] 2025-05-29 09:01:10,438 | INFO     | 
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | job summary report
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | --------------------------------------------------
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | PanDA job id: 6668232245
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | task id: 44871837
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | errors: (none)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | pilot state: finished 
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | transexitcode: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | exeerrorcode: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,439 | INFO     | exeerrordiag: 
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | exitcode: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | exitmsg: OK
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | cpuconsumptiontime: 69856 s
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | nevents: 400
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | neventsw: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | pid: 19193
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | pgrp: 19193
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | corecount: 8
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | event service: False
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | sizes: {0: 2404405, 1: 2405261, 2: 2405261, 11: 2405495, 13: 2405523, 18166: 2437226, 18171: 2446167, 18172: 2446223, 18270: 2446393}
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | --------------------------------------------------
[2025-05-29 11:03:11] 2025-05-29 09:01:10,440 | INFO     | 
[2025-05-29 11:03:11] 2025-05-29 09:01:10,441 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | job 6668232245 has completed (purged errors)
[2025-05-29 11:03:11] 2025-05-29 09:01:10,551 | INFO     | overall cleanup function is called
[2025-05-29 11:03:11] 2025-05-29 09:01:11,561 | INFO     | --- collectZombieJob: --- 10, [19193]
[2025-05-29 11:03:11] 2025-05-29 09:01:11,561 | INFO     | zombie collector waiting for pid 19193
[2025-05-29 11:03:11] 2025-05-29 09:01:11,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 11:03:11] 2025-05-29 09:01:11,562 | INFO     | collected zombie processes
[2025-05-29 11:03:11] 2025-05-29 09:01:11,562 | INFO     | will attempt to kill all subprocesses of pid=19193
[2025-05-29 11:03:11] 2025-05-29 09:01:11,677 | INFO     | process IDs to be killed: [19193] (in reverse order)
[2025-05-29 11:03:11] 2025-05-29 09:01:12,441 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 11:03:11] 2025-05-29 09:01:12,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 11:03:11] 2025-05-29 09:01:12,444 | INFO     | did not find any defunct processes belonging to 19193
[2025-05-29 11:03:11] 2025-05-29 09:01:12,448 | INFO     | did not find any defunct processes belonging to 19193
[2025-05-29 11:03:11] 2025-05-29 09:01:12,449 | INFO     | ready for new job
[2025-05-29 11:03:11] 2025-05-29 09:01:12,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 11:03:11] 2025-05-29 09:01:12,451 | INFO     | **************************************
[2025-05-29 11:03:11] 2025-05-29 09:01:12,451 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 11:03:11] 2025-05-29 09:01:12,451 | INFO     | **************************************
[2025-05-29 11:03:11] 2025-05-29 09:01:12,451 | INFO     | 
[2025-05-29 11:03:11] 2025-05-29 09:01:12,452 | INFO     | pilot is running in a VM
[2025-05-29 11:03:11] 2025-05-29 09:01:12,452 | INFO     | architecture information:
[2025-05-29 11:03:11] 2025-05-29 09:01:12,458 | INFO     | executing command: cat /etc/os-release
[2025-05-29 11:03:11] 2025-05-29 09:01:12,624 | INFO     | cat /etc/os-release:
[2025-05-29 11:03:11] NAME="CentOS Linux"
[2025-05-29 11:03:11] VERSION="7 (Core)"
[2025-05-29 11:03:11] ID="centos"
[2025-05-29 11:03:11] ID_LIKE="rhel fedora"
[2025-05-29 11:03:11] VERSION_ID="7"
[2025-05-29 11:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 11:03:11] ANSI_COLOR="0;31"
[2025-05-29 11:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 11:03:11] HOME_URL="https://www.centos.org/"
[2025-05-29 11:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 11:03:11] 
[2025-05-29 11:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 11:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 11:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 11:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 11:03:11] 
[2025-05-29 11:03:11] 2025-05-29 09:01:12,624 | INFO     | **************************************
[2025-05-29 11:03:11] 2025-05-29 09:01:13,127 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-29 11:03:11] 2025-05-29 09:01:13,280 | INFO     | sufficient remaining disk space (495933456384 B)
[2025-05-29 11:03:11] 2025-05-29 09:01:13,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 11:03:11] 2025-05-29 09:01:13,280 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 11:03:11] 2025-05-29 09:01:13,280 | INFO     | update_server=False
[2025-05-29 11:03:11] 2025-05-29 09:01:13,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 11:03:11] 2025-05-29 09:01:13,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 11:03:11] 2025-05-29 09:01:13,281 | INFO     | aborting loop
[2025-05-29 11:03:11] 2025-05-29 09:01:13,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 11:03:11] 2025-05-29 09:01:13,902 | INFO     | all job control threads have been joined
[2025-05-29 11:03:11] 2025-05-29 09:01:13,938 | INFO     | all data control threads have been joined
[2025-05-29 11:03:11] 2025-05-29 09:01:13,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 11:03:11] 2025-05-29 09:01:14,057 | INFO     | all payload control threads have been joined
[2025-05-29 11:03:11] 2025-05-29 09:01:14,121 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 11:03:11] 2025-05-29 09:01:14,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 11:03:11] 2025-05-29 09:01:14,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 11:03:11] 2025-05-29 09:01:14,286 | INFO     | [job] retrieve thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,287 | INFO     | [job] job monitor thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,307 | INFO     | [data] copytool_in thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,537 | INFO     | [payload] validate_post thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,646 | INFO     | [payload] failed_post thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,908 | INFO     | [job] control thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:14,944 | INFO     | [data] control thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,063 | INFO     | [payload] control thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,070 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,254 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,366 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 11:03:11] 2025-05-29 09:01:15,695 | INFO     | [job] validate thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:15,965 | INFO     | [data] copytool_out thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:16,460 | INFO     | [job] queue monitor thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:17,340 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 11:03:11] 2025-05-29 09:01:17,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420006922048)>', '<ExcThread(monitor, started 140419560093440)>']
[2025-05-29 11:03:11] 2025-05-29 09:01:18,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 11:03:11] 2025-05-29 09:01:18,145 | INFO     | [monitor] control thread has ended
[2025-05-29 11:03:11] 2025-05-29 09:01:22,936 | INFO     | all workflow threads have been joined
[2025-05-29 11:03:11] 2025-05-29 09:01:22,936 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 11:03:11] 2025-05-29 09:01:22,937 | INFO     | traces error code: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:22,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 11:03:11] 2025-05-29 09:01:23,248 [wrapper] ==== pilot stdout END ====
[2025-05-29 11:03:11] 2025-05-29 09:01:23,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 11:03:11] 2025-05-29 09:01:23,343 [wrapper] pilotpid: 12650
[2025-05-29 11:03:11] 2025-05-29 09:01:23,376 [wrapper] Pilot exit status: 0
[2025-05-29 11:03:11] 2025-05-29 09:01:23,750 [wrapper] pandaids: 6668232245
[2025-05-29 11:03:11] 2025-05-29 09:01:24,799 [wrapper] cleanup supervisor_pilot 28792 12651
[2025-05-29 11:03:11] 2025-05-29 09:01:24,910 [wrapper] Test setup, not cleaning
[2025-05-29 11:03:11] 2025-05-29 09:01:25,031 [wrapper] apfmon messages muted
[2025-05-29 11:03:11] 2025-05-29 09:01:25,093 [wrapper] ==== wrapper stdout END ====
[2025-05-29 11:03:11] 2025-05-29 09:01:25,169 [wrapper] ==== wrapper stderr END ====
[2025-05-29 11:03:11]  *** Error codes and diagnostics ***
[2025-05-29 11:03:11]     "exeErrorCode": 0,
[2025-05-29 11:03:11]     "exeErrorDiag": "",
[2025-05-29 11:03:11]     "pilotErrorCode": 0,
[2025-05-29 11:03:11]     "pilotErrorDiag": "",
[2025-05-29 11:03:11]  *** Listing of results directory ***
[2025-05-29 11:03:11] total 421896
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc    495897 May 28 10:16 pilot3.tar.gz
[2025-05-29 11:03:11] -rwx------. 1 boinc boinc     37140 May 28 10:20 runpilot2-wrapper.sh
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc      5111 May 28 10:20 queuedata.json
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc       100 May 29 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 11:03:11] -rwxr-xr-x. 1 boinc boinc      7986 May 29 05:55 run_atlas
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc       105 May 29 05:55 job.xml
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc 226025959 May 29 05:55 EVNT.44871834._003178.pool.root.1
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc    508875 May 29 05:55 input.tar.gz
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc      6370 May 29 05:55 init_data.xml
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc     15093 May 29 05:55 start_atlas.sh
[2025-05-29 11:03:11] drwxrwx--x. 2 boinc boinc        68 May 29 05:55 shared
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc         0 May 29 05:55 boinc_lockfile
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc      2558 May 29 05:55 pandaJob.out
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc    993415 May 29 05:56 agis_schedconf.cvmfs.json
[2025-05-29 11:03:11] drwx------. 4 boinc boinc      4096 May 29 05:56 pilot3
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc 198201906 May 29 10:58 HITS.44871837._081389.pool.root.1
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc       531 May 29 10:58 boinc_task_state.xml
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc      1017 May 29 10:59 memory_monitor_summary.json
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc   1603667 May 29 10:59 agis_ddmendpoints.agis.ALL.json
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc    420399 May 29 10:59 log.44871837._081389.job.log.tgz.1
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc        95 May 29 11:00 pilot_heartbeat.json
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc      7688 May 29 11:01 heartbeat.json
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc      4416 May 29 11:01 pilotlog.txt
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc   1558560 May 29 11:01 log.44871837._081389.job.log.1
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc       357 May 29 11:01 output.list
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc       620 May 29 11:01 runtime_log
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc   1996800 May 29 11:01 result.tar.gz
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc      8659 May 29 11:01 runtime_log.err
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc       657 May 29 11:01 FZFLDm0CRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIfbKDmO3fHMn.diag
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc      8192 May 29 11:03 boinc_mmap_file
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc        28 May 29 11:03 wrapper_checkpoint.txt
[2025-05-29 11:03:11] -rw-r--r--. 1 boinc boinc     20497 May 29 11:03 stderr.txt
[2025-05-29 11:03:11] HITS file was successfully produced:
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc 198201906 May 29 10:58 shared/HITS.pool.root.1
[2025-05-29 11:03:11]  *** Contents of shared directory: ***
[2025-05-29 11:03:11] total 416760
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc 226025959 May 29 05:55 ATLAS.root_0
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc    508875 May 29 05:55 input.tar.gz
[2025-05-29 11:03:11] -rw-r--r--. 2 boinc boinc     15093 May 29 05:55 start_atlas.sh
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc 198201906 May 29 10:58 HITS.pool.root.1
[2025-05-29 11:03:11] -rw-------. 1 boinc boinc   1996800 May 29 11:01 result.tar.gz
11:03:13 (9002): run_atlas exited; CPU time 70092.564330
11:03:13 (9002): called boinc_finish(0)

</stderr_txt>
]]>

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