Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:03:01 (3861482): wrapper (7.7.26015): starting
16:03:01 (3861482): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 16:03:01] Arguments: --nthreads 4
[2025-06-04 16:03:01] Threads: 4
[2025-06-04 16:03:01] Checking for CVMFS
[2025-06-04 16:03:01] No cvmfs_config command found, will try listing directly
[2025-06-04 16:03:01] CVMFS is ok
[2025-06-04 16:03:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:03:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:03:01] Further information can be found at the LHC@home message board.
[2025-06-04 16:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:03:01] Checking for apptainer binary...
[2025-06-04 16:03:01] which: no apptainer in ((null))
[2025-06-04 16:03:01] apptainer is not installed, using version from CVMFS
[2025-06-04 16:03:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:03:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-04 16:03:01] apptainer works
[2025-06-04 16:03:01] Set ATHENA_PROC_NUMBER=4
[2025-06-04 16:03:01] Set ATHENA_CORE_NUMBER=4
[2025-06-04 16:03:01] Starting ATLAS job with PandaID=6668439390
[2025-06-04 16:03:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:59:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:59:08] 2025-06-04 17:57:42,812 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6668439390/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,813 | INFO     | extracted standard info from prmon json
[2025-06-04 19:59:08] 2025-06-04 17:57:42,813 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:59:08] 2025-06-04 17:57:42,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:59:08] 2025-06-04 17:57:42,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:59:08] 2025-06-04 17:57:42,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:59:08] 2025-06-04 17:57:42,819 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:59:08] 2025-06-04 17:57:42,819 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,821 | INFO     | sum of deviations: 3576562370.0000076
[2025-06-04 19:59:08] 2025-06-04 17:57:42,821 | INFO     | mean x: 1749052837.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,821 | INFO     | mean y: 2321085.272727273
[2025-06-04 19:59:08] 2025-06-04 17:57:42,821 | INFO     | -- intersect: -1634354135.9515526
[2025-06-04 19:59:08] 2025-06-04 17:57:42,822 | INFO     | intersect: -1634354135.9515526
[2025-06-04 19:59:08] 2025-06-04 17:57:42,822 | INFO     | chi2: 2.6866848779567913
[2025-06-04 19:59:08] 2025-06-04 17:57:42,822 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 19:59:08] 2025-06-04 17:57:42,824 | INFO     | sum of deviations: 19470376713.500008
[2025-06-04 19:59:08] 2025-06-04 17:57:42,824 | INFO     | mean x: 1749052684.5
[2025-06-04 19:59:08] 2025-06-04 17:57:42,824 | INFO     | mean y: 2330887.181415929
[2025-06-04 19:59:08] 2025-06-04 17:57:42,824 | INFO     | -- intersect: -9512082288.63348
[2025-06-04 19:59:08] 2025-06-04 17:57:42,825 | INFO     | intersect: -9512082288.63348
[2025-06-04 19:59:08] 2025-06-04 17:57:42,825 | INFO     | chi2: 1.6981130588506774
[2025-06-04 19:59:08] 2025-06-04 17:57:42,825 | INFO     | current chi2=1.6981130588506774 (change=36.795227725326576 %)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,826 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,827 | INFO     | sum of deviations: 18834116061.000004
[2025-06-04 19:59:08] 2025-06-04 17:57:42,827 | INFO     | mean x: 1749052532.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,827 | INFO     | mean y: 2330469.076923077
[2025-06-04 19:59:08] 2025-06-04 17:57:42,827 | INFO     | -- intersect: -9840086118.309504
[2025-06-04 19:59:08] 2025-06-04 17:57:42,828 | INFO     | intersect: -9840086118.309504
[2025-06-04 19:59:08] 2025-06-04 17:57:42,828 | INFO     | chi2: 1.6989602728025375
[2025-06-04 19:59:08] 2025-06-04 17:57:42,828 | INFO     | current chi2=1.6989602728025375 (change=-0.04989149264498694 %)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,828 | INFO     | right removable region: 220
[2025-06-04 19:59:08] 2025-06-04 17:57:42,829 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 19:59:08] 2025-06-04 17:57:42,830 | INFO     | sum of deviations: -32060833230.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,830 | INFO     | mean x: 1749052989.5
[2025-06-04 19:59:08] 2025-06-04 17:57:42,830 | INFO     | mean y: 2343253.6194690266
[2025-06-04 19:59:08] 2025-06-04 17:57:42,830 | INFO     | -- intersect: 15669223858.580973
[2025-06-04 19:59:08] 2025-06-04 17:57:42,831 | INFO     | intersect: 15669223858.580973
[2025-06-04 19:59:08] 2025-06-04 17:57:42,831 | INFO     | chi2: 1.105122962625876
[2025-06-04 19:59:08] 2025-06-04 17:57:42,831 | INFO     | current chi2=1.105122962625876 (change=58.8666697872541 %)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,831 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,833 | INFO     | sum of deviations: -31817275418.999996
[2025-06-04 19:59:08] 2025-06-04 17:57:42,833 | INFO     | mean x: 1749053142.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,833 | INFO     | mean y: 2343093.21719457
[2025-06-04 19:59:08] 2025-06-04 17:57:42,833 | INFO     | -- intersect: 16629562950.65658
[2025-06-04 19:59:08] 2025-06-04 17:57:42,833 | INFO     | intersect: 16629562950.65658
[2025-06-04 19:59:08] 2025-06-04 17:57:42,834 | INFO     | chi2: 1.1043984311516784
[2025-06-04 19:59:08] 2025-06-04 17:57:42,834 | INFO     | current chi2=1.1043984311516784 (change=0.06556116366238146 %)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,834 | INFO     | left removable region: 20
[2025-06-04 19:59:08] 2025-06-04 17:57:42,834 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | sum of deviations: -8416556374.000002
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | mean x: 1749053111.5
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | mean y: 2348240.6
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | -- intersect: 5936790117.123879
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | intersect: 5936790117.123879
[2025-06-04 19:59:08] 2025-06-04 17:57:42,836 | INFO     | chi2: 0.06528088974030419
[2025-06-04 19:59:08] 2025-06-04 17:57:42,837 | INFO     | -- intersect: 5936790117.123879
[2025-06-04 19:59:08] 2025-06-04 17:57:42,837 | INFO     | current memory leak: -3.39 B/s (using 200 data points, chi2=0.07)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,837 | INFO     | ..............................
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . Timing measurements:
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . get job = 0 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . initial setup = 1 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . payload setup = 7 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . stage-in = 0 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . payload execution = 14035 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . stage-out = 1 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | . log creation = 0 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,838 | INFO     | ..............................
[2025-06-04 19:59:08] 2025-06-04 17:57:42,948 | INFO     | 
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | job summary report
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | --------------------------------------------------
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | PanDA job id: 6668439390
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | task id: 44871837
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | errors: (none)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | pilot state: finished 
[2025-06-04 19:59:08] 2025-06-04 17:57:42,949 | INFO     | transexitcode: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | exeerrorcode: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | exeerrordiag: 
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | exitcode: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | exitmsg: OK
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | cpuconsumptiontime: 53274 s
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | nevents: 400
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | neventsw: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | pid: 3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | pgrp: 3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | corecount: 4
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | event service: False
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | sizes: {0: 2397403, 1: 2397403, 5: 2397637, 11: 2397693, 14046: 2427742, 14048: 2436889, 14053: 2437003}
[2025-06-04 19:59:08] 2025-06-04 17:57:42,950 | INFO     | --------------------------------------------------
[2025-06-04 19:59:08] 2025-06-04 17:57:42,951 | INFO     | 
[2025-06-04 19:59:08] 2025-06-04 17:57:42,951 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-04 19:59:08] 2025-06-04 17:57:42,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:59:08] 2025-06-04 17:57:42,976 | INFO     | job 6668439390 has completed (purged errors)
[2025-06-04 19:59:08] 2025-06-04 17:57:42,976 | INFO     | overall cleanup function is called
[2025-06-04 19:59:08] 2025-06-04 17:57:43,983 | INFO     | --- collectZombieJob: --- 10, [3872455]
[2025-06-04 19:59:08] 2025-06-04 17:57:43,984 | INFO     | zombie collector waiting for pid 3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:43,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:59:08] 2025-06-04 17:57:43,984 | INFO     | collected zombie processes
[2025-06-04 19:59:08] 2025-06-04 17:57:43,984 | INFO     | will attempt to kill all subprocesses of pid=3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:44,380 | INFO     | process IDs to be killed: [3872455] (in reverse order)
[2025-06-04 19:59:08] 2025-06-04 17:57:44,505 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:59:08] 2025-06-04 17:57:44,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:59:08] 2025-06-04 17:57:44,518 | INFO     | did not find any defunct processes belonging to 3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:44,531 | INFO     | did not find any defunct processes belonging to 3872455
[2025-06-04 19:59:08] 2025-06-04 17:57:44,531 | INFO     | ready for new job
[2025-06-04 19:59:08] 2025-06-04 17:57:44,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:59:08] 2025-06-04 17:57:44,534 | INFO     | **************************************
[2025-06-04 19:59:08] 2025-06-04 17:57:44,534 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:59:08] 2025-06-04 17:57:44,534 | INFO     | **************************************
[2025-06-04 19:59:08] 2025-06-04 17:57:44,534 | INFO     | 
[2025-06-04 19:59:08] 2025-06-04 17:57:44,538 | INFO     | architecture information:
[2025-06-04 19:59:08] 2025-06-04 17:57:44,539 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:59:08] 2025-06-04 17:57:44,556 | INFO     | cat /etc/os-release:
[2025-06-04 19:59:08] NAME="CentOS Linux"
[2025-06-04 19:59:08] VERSION="7 (Core)"
[2025-06-04 19:59:08] ID="centos"
[2025-06-04 19:59:08] ID_LIKE="rhel fedora"
[2025-06-04 19:59:08] VERSION_ID="7"
[2025-06-04 19:59:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:59:08] ANSI_COLOR="0;31"
[2025-06-04 19:59:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:59:08] HOME_URL="https://www.centos.org/"
[2025-06-04 19:59:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:59:08] 
[2025-06-04 19:59:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:59:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:59:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:59:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:59:08] 
[2025-06-04 19:59:08] 2025-06-04 17:57:44,557 | INFO     | **************************************
[2025-06-04 19:59:08] 2025-06-04 17:57:45,060 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-04 19:59:08] 2025-06-04 17:57:45,079 | INFO     | sufficient remaining disk space (646961954816 B)
[2025-06-04 19:59:08] 2025-06-04 17:57:45,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:59:08] 2025-06-04 17:57:45,080 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:59:08] 2025-06-04 17:57:45,080 | INFO     | update_server=False
[2025-06-04 19:59:08] 2025-06-04 17:57:45,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:59:08] 2025-06-04 17:57:45,080 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:59:08] 2025-06-04 17:57:45,081 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:59:08] 2025-06-04 17:57:45,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:59:08] 2025-06-04 17:57:45,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:59:08] 2025-06-04 17:57:45,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:59:08] 2025-06-04 17:57:45,081 | INFO     | aborting loop
[2025-06-04 19:59:08] 2025-06-04 17:57:45,628 | INFO     | all job control threads have been joined
[2025-06-04 19:59:08] 2025-06-04 17:57:45,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:59:08] 2025-06-04 17:57:46,015 | INFO     | all data control threads have been joined
[2025-06-04 19:59:08] 2025-06-04 17:57:46,085 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,086 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,180 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,409 | INFO     | all payload control threads have been joined
[2025-06-04 19:59:08] 2025-06-04 17:57:46,634 | INFO     | [job] control thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,746 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:46,950 | INFO     | [job] validate thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,016 | INFO     | [data] control thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,121 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,181 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,187 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,374 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,415 | INFO     | [payload] control thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,926 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:47,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:59:08] 2025-06-04 17:57:48,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:59:08] 2025-06-04 17:57:48,963 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:52,519 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:59:08] 2025-06-04 17:57:53,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23148607604544)>', '<ExcThread(monitor, started 23148370036480)>']
[2025-06-04 19:59:08] 2025-06-04 17:57:54,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:59:08] 2025-06-04 17:57:54,125 | INFO     | [monitor] control thread has ended
[2025-06-04 19:59:08] 2025-06-04 17:57:58,382 | INFO     | all workflow threads have been joined
[2025-06-04 19:59:08] 2025-06-04 17:57:58,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:59:08] 2025-06-04 17:57:58,384 | INFO     | traces error code: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:58,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:59:08] 2025-06-04 17:57:58,572 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:59:08] 2025-06-04 17:57:58,576 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:59:08] 2025-06-04 17:57:58,579 [wrapper] pilotpid: 3865428
[2025-06-04 19:59:08] 2025-06-04 17:57:58,582 [wrapper] Pilot exit status: 0
[2025-06-04 19:59:08] 2025-06-04 17:57:58,595 [wrapper] pandaids: 6668439390
[2025-06-04 19:59:08] 2025-06-04 17:57:58,672 [wrapper] cleanup supervisor_pilot   23618 3865429
[2025-06-04 19:59:08] 2025-06-04 17:57:58,676 [wrapper] Test setup, not cleaning
[2025-06-04 19:59:08] 2025-06-04 17:57:58,679 [wrapper] apfmon messages muted
[2025-06-04 19:59:08] 2025-06-04 17:57:58,683 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:59:08] 2025-06-04 17:57:58,686 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:59:08]  *** Error codes and diagnostics ***
[2025-06-04 19:59:08]     "exeErrorCode": 0,
[2025-06-04 19:59:08]     "exeErrorDiag": "",
[2025-06-04 19:59:08]     "pilotErrorCode": 0,
[2025-06-04 19:59:08]     "pilotErrorDiag": "",
[2025-06-04 19:59:08]  *** Listing of results directory ***
[2025-06-04 19:59:08] total 423176
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc    495897 May 28 13:30 pilot3.tar.gz
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc      5111 May 28 13:35 queuedata.json
[2025-06-04 19:59:08] -rwx------ 1 boinc boinc     37140 May 28 13:36 runpilot2-wrapper.sh
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:59:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:02 run_atlas
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:02 job.xml
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc      6633 Jun  4 16:03 init_data.xml
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc 223694464 Jun  4 16:03 EVNT.44871834._003265.pool.root.1
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:03 start_atlas.sh
[2025-06-04 19:59:08] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:03 shared
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc    508882 Jun  4 16:03 input.tar.gz
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:03 boinc_lockfile
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc      2559 Jun  4 16:03 pandaJob.out
[2025-06-04 19:59:08] -rw------- 1 boinc boinc    986819 Jun  4 16:03 agis_schedconf.cvmfs.json
[2025-06-04 19:59:08] drwx------ 4 boinc boinc      4096 Jun  4 16:03 pilot3
[2025-06-04 19:59:08] -rw------- 1 boinc boinc 202523904 Jun  4 19:56 HITS.44871837._083706.pool.root.1
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:57 boinc_task_state.xml
[2025-06-04 19:59:08] -rw------- 1 boinc boinc        95 Jun  4 19:57 pilot_heartbeat.json
[2025-06-04 19:59:08] -rw------- 1 boinc boinc      1035 Jun  4 19:57 memory_monitor_summary.json
[2025-06-04 19:59:08] -rw------- 1 boinc boinc   1598969 Jun  4 19:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:59:08] -rw------- 1 boinc boinc    338318 Jun  4 19:57 log.44871837._083706.job.log.tgz.1
[2025-06-04 19:59:08] -rw------- 1 boinc boinc      7719 Jun  4 19:57 heartbeat.json
[2025-06-04 19:59:08] -rw------- 1 boinc boinc      4486 Jun  4 19:57 pilotlog.txt
[2025-06-04 19:59:08] -rw------- 1 boinc boinc   1305012 Jun  4 19:57 log.44871837._083706.job.log.1
[2025-06-04 19:59:08] -rw------- 1 boinc boinc       357 Jun  4 19:57 output.list
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:57 runtime_log
[2025-06-04 19:59:08] -rw------- 1 boinc boinc   1658880 Jun  4 19:57 result.tar.gz
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc      9026 Jun  4 19:57 runtime_log.err
[2025-06-04 19:59:08] -rw------- 1 boinc boinc       665 Jun  4 19:57 aknNDmCGUe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4RTKDmMVJdUm.diag
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc        26 Jun  4 19:59 wrapper_checkpoint.txt
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:59 boinc_mmap_file
[2025-06-04 19:59:08] -rw-r--r-- 1 boinc boinc     20636 Jun  4 19:59 stderr.txt
[2025-06-04 19:59:08] HITS file was successfully produced:
[2025-06-04 19:59:08] -rw------- 1 boinc boinc 202523904 Jun  4 19:56 shared/HITS.pool.root.1
[2025-06-04 19:59:08]  *** Contents of shared directory: ***
[2025-06-04 19:59:08] total 418376
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc 223694464 Jun  4 16:03 ATLAS.root_0
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:03 start_atlas.sh
[2025-06-04 19:59:08] -rw-r--r-- 2 boinc boinc    508882 Jun  4 16:03 input.tar.gz
[2025-06-04 19:59:08] -rw------- 1 boinc boinc 202523904 Jun  4 19:56 HITS.pool.root.1
[2025-06-04 19:59:08] -rw------- 1 boinc boinc   1658880 Jun  4 19:57 result.tar.gz
19:59:10 (3861482): run_atlas exited; CPU time 53864.151305
19:59:10 (3861482): called boinc_finish(0)

</stderr_txt>
]]>

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