Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:47:05 (1937801): wrapper (7.7.26015): starting
08:47:05 (1937801): wrapper: running run_atlas (--nthreads 3)
[2025-05-29 08:47:05] Arguments: --nthreads 3
[2025-05-29 08:47:05] Threads: 3
[2025-05-29 08:47:05] Checking for CVMFS
[2025-05-29 08:47:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 08:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 08:47:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 08:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 08:47:05] 2.9.2.0 50808 7360 82944 146546 0 55 8307349 36864001 0 130560 0 4992874 99.990 1657626 4704 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-29 08:47:05] CVMFS is ok
[2025-05-29 08:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 08:47:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 08:47:05] Further information can be found at the LHC@home message board.
[2025-05-29 08:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 08:47:05] Checking for apptainer binary...
[2025-05-29 08:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 08:47:05] Running /usr/bin/apptainer --version
[2025-05-29 08:47:05] apptainer version 1.3.6-6.1
[2025-05-29 08:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 08:47:05] cosA125
[2025-05-29 08:47:05] apptainer works
[2025-05-29 08:47:05] Set ATHENA_PROC_NUMBER=3
[2025-05-29 08:47:05] Set ATHENA_CORE_NUMBER=3
[2025-05-29 08:47:05] Starting ATLAS job with PandaID=6668439069
[2025-05-29 08:47:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 10:32:29]  *** The last 200 lines of the pilot log: ***
[2025-05-29 10:32:29] 2025-05-29 08:32:12,778 | INFO     | total number of processed events: 400 (read)
[2025-05-29 10:32:29] 2025-05-29 08:32:12,779 | INFO     | executing command: lscpu
[2025-05-29 10:32:29] 2025-05-29 08:32:12,793 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 10:32:29] 2025-05-29 08:32:12,808 | INFO     | number of running child processes to parent process 1947928: 1
[2025-05-29 10:32:29] 2025-05-29 08:32:12,808 | INFO     | maximum number of monitored processes: 6
[2025-05-29 10:32:29] 2025-05-29 08:32:15,312 | INFO     | monitor loop #483: job 0:6668439069 is in state 'finished'
[2025-05-29 10:32:29] 2025-05-29 08:32:15,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,314 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-29 10:32:29] 2025-05-29 08:32:15,314 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668439069/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,314 | INFO     | extracted standard info from prmon json
[2025-05-29 10:32:29] 2025-05-29 08:32:15,314 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 10:32:29] 2025-05-29 08:32:15,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 10:32:29] 2025-05-29 08:32:15,315 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 10:32:29] 2025-05-29 08:32:15,315 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 10:32:29] 2025-05-29 08:32:15,315 | INFO     | fitting pss+swap vs Time
[2025-05-29 10:32:29] 2025-05-29 08:32:15,315 | INFO     | sum of square deviations: 338804492.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | sum of deviations: -14435309558.999998
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | mean x: 1748504361.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | mean y: 2457657.019417476
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | -- intersect: 74500294351.27577
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | intersect: 74500294351.27577
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | chi2: 1.7448507285021575
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | sum of square deviations: 291817564.5
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | sum of deviations: -12689328061.5
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | mean x: 1748504208.5
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | mean y: 2463328.214285714
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | -- intersect: 76034019401.90598
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | intersect: 76034019401.90598
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | chi2: 1.7424245964434664
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | current chi2=1.7424245964434664 (change=0.13904525006410215 %)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,316 | INFO     | right removable region: 97
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | sum of square deviations: 291817564.5
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | sum of deviations: -27792539827.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | mean x: 1748504513.5
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | mean y: 2499746.4693877553
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | -- intersect: 166529080873.96698
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | intersect: 166529080873.96698
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | chi2: 0.18525198674922896
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | current chi2=0.18525198674922896 (change=89.38293209137402 %)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | sum of square deviations: 249388862.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | sum of deviations: -24570841846.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | mean x: 1748504666.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | mean y: 2488138.9784946237
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | -- intersect: 172272537694.2752
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | intersect: 172272537694.2752
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | chi2: 0.1831741202265877
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | current chi2=0.1831741202265877 (change=1.1216433135769992 %)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,317 | INFO     | left removable region: 20
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | sum of square deviations: 141539398.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | sum of deviations: -15765746826.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | mean x: 1748504788.0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | mean y: 2466578.701298701
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | -- intersect: 194764378817.84198
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | intersect: 194764378817.84198
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | chi2: 0.16375423189588303
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | -- intersect: 194764378817.84198
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | current memory leak: -111.39 B/s (using 77 data points, chi2=0.16)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | ..............................
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . Timing measurements:
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . get job = 0 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . initial setup = 1 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . payload setup = 3 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . stage-in = 0 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . payload execution = 6282 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . stage-out = 0 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | . log creation = 0 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,318 | INFO     | ..............................
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | 
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | job summary report
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | --------------------------------------------------
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | PanDA job id: 6668439069
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | task id: 44871837
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | errors: (none)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | pilot state: finished 
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | transexitcode: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | exeerrorcode: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | exeerrordiag: 
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | exitcode: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | exitmsg: OK
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | cpuconsumptiontime: 18153 s
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | nevents: 400
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | neventsw: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | pid: 1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | pgrp: 1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | corecount: 3
[2025-05-29 10:32:29] 2025-05-29 08:32:15,349 | INFO     | event service: False
[2025-05-29 10:32:29] 2025-05-29 08:32:15,350 | INFO     | sizes: {0: 2405185, 3: 2405391, 11: 2405419, 6286: 2432406, 6287: 2441353, 6288: 2441409, 6291: 2441707}
[2025-05-29 10:32:29] 2025-05-29 08:32:15,350 | INFO     | --------------------------------------------------
[2025-05-29 10:32:29] 2025-05-29 08:32:15,350 | INFO     | 
[2025-05-29 10:32:29] 2025-05-29 08:32:15,350 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | job 6668439069 has completed (purged errors)
[2025-05-29 10:32:29] 2025-05-29 08:32:15,363 | INFO     | overall cleanup function is called
[2025-05-29 10:32:29] 2025-05-29 08:32:16,369 | INFO     | --- collectZombieJob: --- 10, [1947928]
[2025-05-29 10:32:29] 2025-05-29 08:32:16,369 | INFO     | zombie collector waiting for pid 1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:16,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 10:32:29] 2025-05-29 08:32:16,369 | INFO     | collected zombie processes
[2025-05-29 10:32:29] 2025-05-29 08:32:16,369 | INFO     | will attempt to kill all subprocesses of pid=1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:16,429 | INFO     | process IDs to be killed: [1947928] (in reverse order)
[2025-05-29 10:32:29] 2025-05-29 08:32:16,458 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 10:32:29] 2025-05-29 08:32:16,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 10:32:29] 2025-05-29 08:32:16,461 | INFO     | did not find any defunct processes belonging to 1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:16,462 | INFO     | did not find any defunct processes belonging to 1947928
[2025-05-29 10:32:29] 2025-05-29 08:32:16,462 | INFO     | ready for new job
[2025-05-29 10:32:29] 2025-05-29 08:32:16,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | **************************************
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | **************************************
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | 
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | architecture information:
[2025-05-29 10:32:29] 2025-05-29 08:32:16,463 | INFO     | executing command: cat /etc/os-release
[2025-05-29 10:32:29] 2025-05-29 08:32:16,472 | INFO     | cat /etc/os-release:
[2025-05-29 10:32:29] NAME="CentOS Linux"
[2025-05-29 10:32:29] VERSION="7 (Core)"
[2025-05-29 10:32:29] ID="centos"
[2025-05-29 10:32:29] ID_LIKE="rhel fedora"
[2025-05-29 10:32:29] VERSION_ID="7"
[2025-05-29 10:32:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 10:32:29] ANSI_COLOR="0;31"
[2025-05-29 10:32:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 10:32:29] HOME_URL="https://www.centos.org/"
[2025-05-29 10:32:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 10:32:29] 
[2025-05-29 10:32:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 10:32:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 10:32:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 10:32:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 10:32:29] 
[2025-05-29 10:32:29] 2025-05-29 08:32:16,473 | INFO     | **************************************
[2025-05-29 10:32:29] 2025-05-29 08:32:16,976 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-29 10:32:29] 2025-05-29 08:32:16,988 | INFO     | sufficient remaining disk space (352002768896 B)
[2025-05-29 10:32:29] 2025-05-29 08:32:16,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | INFO     | update_server=False
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 10:32:29] 2025-05-29 08:32:16,989 | INFO     | aborting loop
[2025-05-29 10:32:29] 2025-05-29 08:32:17,572 | INFO     | all data control threads have been joined
[2025-05-29 10:32:29] 2025-05-29 08:32:17,578 | INFO     | PID=1941438 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 10:32:29] 2025-05-29 08:32:17,578 | INFO     | all job control threads have been joined
[2025-05-29 10:32:29] 2025-05-29 08:32:17,578 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 10:32:29] 2025-05-29 08:32:17,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 10:32:29] 2025-05-29 08:32:17,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 10:32:29] 2025-05-29 08:32:17,994 | INFO     | [job] retrieve thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:17,994 | INFO     | [job] queue monitor thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:17,995 | INFO     | [job] job monitor thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,221 | INFO     | all payload control threads have been joined
[2025-05-29 10:32:29] 2025-05-29 08:32:18,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 10:32:29] 2025-05-29 08:32:18,331 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,578 | INFO     | [data] control thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,583 | INFO     | [job] control thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,854 | INFO     | [data] copytool_in thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,862 | INFO     | [payload] validate_post thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:18,995 | INFO     | [data] copytool_out thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:19,085 | INFO     | [payload] failed_post thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:19,226 | INFO     | [payload] control thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:19,378 | INFO     | [job] validate thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:19,382 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:19,423 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:22,330 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 10:32:29] 2025-05-29 08:32:23,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689277249344)>', '<ExcThread(monitor, started 139688996210432)>']
[2025-05-29 10:32:29] 2025-05-29 08:32:24,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 10:32:29] 2025-05-29 08:32:24,616 | INFO     | [monitor] control thread has ended
[2025-05-29 10:32:29] 2025-05-29 08:32:28,905 | INFO     | all workflow threads have been joined
[2025-05-29 10:32:29] 2025-05-29 08:32:28,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 10:32:29] 2025-05-29 08:32:28,906 | INFO     | traces error code: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:28,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 10:32:29] 2025-05-29 08:32:28,956 [wrapper] ==== pilot stdout END ====
[2025-05-29 10:32:29] 2025-05-29 08:32:28,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 10:32:29] 2025-05-29 08:32:28,960 [wrapper] pilotpid: 1941438
[2025-05-29 10:32:29] 2025-05-29 08:32:28,962 [wrapper] Pilot exit status: 0
[2025-05-29 10:32:29] 2025-05-29 08:32:28,969 [wrapper] pandaids: 6668439069
[2025-05-29 10:32:29] 2025-05-29 08:32:28,988 [wrapper] cleanup supervisor_pilot 1963396 1941439
[2025-05-29 10:32:29] 2025-05-29 08:32:28,991 [wrapper] Test setup, not cleaning
[2025-05-29 10:32:29] 2025-05-29 08:32:28,993 [wrapper] apfmon messages muted
[2025-05-29 10:32:29] 2025-05-29 08:32:28,995 [wrapper] ==== wrapper stdout END ====
[2025-05-29 10:32:29] 2025-05-29 08:32:28,997 [wrapper] ==== wrapper stderr END ====
[2025-05-29 10:32:29]  *** Error codes and diagnostics ***
[2025-05-29 10:32:29]     "exeErrorCode": 0,
[2025-05-29 10:32:29]     "exeErrorDiag": "",
[2025-05-29 10:32:29]     "pilotErrorCode": 0,
[2025-05-29 10:32:29]     "pilotErrorDiag": "",
[2025-05-29 10:32:29]  *** Listing of results directory ***
[2025-05-29 10:32:29] total 419712
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc      5111 May 28 13:04 queuedata.json
[2025-05-29 10:32:29] -rwx------ 1 boinc boinc     37140 May 28 13:04 runpilot2-wrapper.sh
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc    495897 May 28 13:04 pilot3.tar.gz
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc       100 May 29 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 10:32:29] -rwxr-xr-x 1 boinc boinc      7986 May 29 08:47 run_atlas
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc       105 May 29 08:47 job.xml
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc 223718711 May 29 08:47 EVNT.44871834._000419.pool.root.1
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc      6920 May 29 08:47 init_data.xml
[2025-05-29 10:32:29] drwxrwx--x 2 boinc boinc      4096 May 29 08:47 shared
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc    508869 May 29 08:47 input.tar.gz
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc     15093 May 29 08:47 start_atlas.sh
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc         0 May 29 08:47 boinc_lockfile
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc      2558 May 29 08:47 pandaJob.out
[2025-05-29 10:32:29] -rw------- 1 boinc boinc    993147 May 29 08:47 agis_schedconf.cvmfs.json
[2025-05-29 10:32:29] -rw------- 1 boinc boinc   1603667 May 29 08:47 agis_ddmendpoints.agis.ALL.json
[2025-05-29 10:32:29] drwx------ 4 boinc boinc      4096 May 29 08:47 pilot3
[2025-05-29 10:32:29] -rw------- 1 boinc boinc        95 May 29 10:31 pilot_heartbeat.json
[2025-05-29 10:32:29] -rw------- 1 boinc boinc 200523450 May 29 10:31 HITS.44871837._083405.pool.root.1
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc       529 May 29 10:31 boinc_task_state.xml
[2025-05-29 10:32:29] -rw------- 1 boinc boinc      1022 May 29 10:32 memory_monitor_summary.json
[2025-05-29 10:32:29] -rw------- 1 boinc boinc    253606 May 29 10:32 log.44871837._083405.job.log.tgz.1
[2025-05-29 10:32:29] -rw------- 1 boinc boinc      7669 May 29 10:32 heartbeat.json
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc        27 May 29 10:32 wrapper_checkpoint.txt
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc      8192 May 29 10:32 boinc_mmap_file
[2025-05-29 10:32:29] -rw------- 1 boinc boinc      4676 May 29 10:32 pilotlog.txt
[2025-05-29 10:32:29] -rw------- 1 boinc boinc    600966 May 29 10:32 log.44871837._083405.job.log.1
[2025-05-29 10:32:29] -rw------- 1 boinc boinc       357 May 29 10:32 output.list
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc       620 May 29 10:32 runtime_log
[2025-05-29 10:32:29] -rw------- 1 boinc boinc    870400 May 29 10:32 result.tar.gz
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc      8738 May 29 10:32 runtime_log.err
[2025-05-29 10:32:29] -rw------- 1 boinc boinc       660 May 29 10:32 ZtqKDmElTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEOTKDmDajWHn.diag
[2025-05-29 10:32:29] -rw-r--r-- 1 boinc boinc     21142 May 29 10:32 stderr.txt
[2025-05-29 10:32:29] HITS file was successfully produced:
[2025-05-29 10:32:29] -rw------- 1 boinc boinc 200523450 May 29 10:31 shared/HITS.pool.root.1
[2025-05-29 10:32:29]  *** Contents of shared directory: ***
[2025-05-29 10:32:29] total 415672
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc 223718711 May 29 08:47 ATLAS.root_0
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc    508869 May 29 08:47 input.tar.gz
[2025-05-29 10:32:29] -rw-r--r-- 2 boinc boinc     15093 May 29 08:47 start_atlas.sh
[2025-05-29 10:32:29] -rw------- 1 boinc boinc 200523450 May 29 10:31 HITS.pool.root.1
[2025-05-29 10:32:29] -rw------- 1 boinc boinc    870400 May 29 10:32 result.tar.gz
10:32:30 (1937801): run_atlas exited; CPU time 18184.465697
10:32:30 (1937801): called boinc_finish(0)

</stderr_txt>
]]>

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