Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:57:48 (225106): wrapper (7.7.26015): starting
06:57:48 (225106): wrapper: running run_atlas (--nthreads 3)
[2025-06-01 06:57:48] Arguments: --nthreads 3
[2025-06-01 06:57:48] Threads: 3
[2025-06-01 06:57:48] Checking for CVMFS
[2025-06-01 06:57:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 06:57:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 06:57:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 06:57:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 06:57:49] 2.12.7.0 68668 1258 47844 146658 1 55 8366485 10240001 0 130560 0 409837 99.979 380380 1863 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-01 06:57:49] CVMFS is ok
[2025-06-01 06:57:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 06:57:49] Checking for apptainer binary...
[2025-06-01 06:57:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 06:57:49] Running /usr/bin/apptainer --version
[2025-06-01 06:57:49] apptainer version 1.3.4
[2025-06-01 06:57:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 06:57:49] ahanlst03
[2025-06-01 06:57:49] apptainer works
[2025-06-01 06:57:49] Set ATHENA_PROC_NUMBER=3
[2025-06-01 06:57:49] Set ATHENA_CORE_NUMBER=3
[2025-06-01 06:57:49] Starting ATLAS job with PandaID=6668231968
[2025-06-01 06:57:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 14:00:32]  *** The last 200 lines of the pilot log: ***
[2025-06-01 14:00:32] 2025-06-01 12:00:09,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-01 14:00:32] 2025-06-01 12:00:11,638 | INFO     | monitor loop #1910: job 0:6668231968 is in state 'finished'
[2025-06-01 14:00:32] 2025-06-01 12:00:11,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 14:00:32] 2025-06-01 12:00:12,885 | INFO     | PID=228694 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-01 14:00:32] 2025-06-01 12:00:14,141 | INFO     | monitor loop #1911: job 0:6668231968 is in state 'finished'
[2025-06-01 14:00:32] 2025-06-01 12:00:14,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 14:00:32] 2025-06-01 12:00:16,644 | INFO     | monitor loop #1912: job 0:6668231968 is in state 'finished'
[2025-06-01 14:00:32] 2025-06-01 12:00:16,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,779 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-01 14:00:32] 2025-06-01 12:00:18,780 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6668231968/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,780 | INFO     | extracted standard info from prmon json
[2025-06-01 14:00:32] 2025-06-01 12:00:18,781 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 14:00:32] 2025-06-01 12:00:18,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 14:00:32] 2025-06-01 12:00:18,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 14:00:32] 2025-06-01 12:00:18,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 14:00:32] 2025-06-01 12:00:18,789 | INFO     | fitting pss+swap vs Time
[2025-06-01 14:00:32] 2025-06-01 12:00:18,790 | INFO     | sum of square deviations: 22162573680.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,795 | INFO     | sum of deviations: -14817093857.999998
[2025-06-01 14:00:32] 2025-06-01 12:00:18,795 | INFO     | mean x: 1748766538.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,796 | INFO     | mean y: 2312473.925301205
[2025-06-01 14:00:32] 2025-06-01 12:00:18,796 | INFO     | -- intersect: 1171474427.0182743
[2025-06-01 14:00:32] 2025-06-01 12:00:18,796 | INFO     | intersect: 1171474427.0182743
[2025-06-01 14:00:32] 2025-06-01 12:00:18,796 | INFO     | chi2: 1.6459044061743573
[2025-06-01 14:00:32] 2025-06-01 12:00:18,797 | INFO     | sum of square deviations: 21371126282.5
[2025-06-01 14:00:32] 2025-06-01 12:00:18,802 | INFO     | sum of deviations: -14690635124.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,802 | INFO     | mean x: 1748766385.5
[2025-06-01 14:00:32] 2025-06-01 12:00:18,802 | INFO     | mean y: 2312498.2926829266
[2025-06-01 14:00:32] 2025-06-01 12:00:18,803 | INFO     | -- intersect: 1204424569.8279014
[2025-06-01 14:00:32] 2025-06-01 12:00:18,803 | INFO     | intersect: 1204424569.8279014
[2025-06-01 14:00:32] 2025-06-01 12:00:18,803 | INFO     | chi2: 1.6456490589136878
[2025-06-01 14:00:32] 2025-06-01 12:00:18,803 | INFO     | current chi2=1.6456490589136878 (change=0.015514100315398108 %)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,803 | INFO     | right removable region: 409
[2025-06-01 14:00:32] 2025-06-01 12:00:18,804 | INFO     | sum of square deviations: 21371126282.5
[2025-06-01 14:00:32] 2025-06-01 12:00:18,809 | INFO     | sum of deviations: -56760535074.99999
[2025-06-01 14:00:32] 2025-06-01 12:00:18,809 | INFO     | mean x: 1748766690.5
[2025-06-01 14:00:32] 2025-06-01 12:00:18,809 | INFO     | mean y: 2320482.975609756
[2025-06-01 14:00:32] 2025-06-01 12:00:18,809 | INFO     | -- intersect: 4646948555.5446205
[2025-06-01 14:00:32] 2025-06-01 12:00:18,810 | INFO     | intersect: 4646948555.5446205
[2025-06-01 14:00:32] 2025-06-01 12:00:18,810 | INFO     | chi2: 0.3851245059229943
[2025-06-01 14:00:32] 2025-06-01 12:00:18,810 | INFO     | current chi2=0.3851245059229943 (change=76.60104046879887 %)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,811 | INFO     | sum of square deviations: 20598749010.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,815 | INFO     | sum of deviations: -35834939281.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,816 | INFO     | mean x: 1748766843.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,816 | INFO     | mean y: 2316348.5530864196
[2025-06-01 14:00:32] 2025-06-01 12:00:18,816 | INFO     | -- intersect: 3044586226.452388
[2025-06-01 14:00:32] 2025-06-01 12:00:18,816 | INFO     | intersect: 3044586226.452388
[2025-06-01 14:00:32] 2025-06-01 12:00:18,816 | INFO     | chi2: 0.30050288425780647
[2025-06-01 14:00:32] 2025-06-01 12:00:18,817 | INFO     | current chi2=0.30050288425780647 (change=21.972536248344564 %)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,817 | INFO     | left removable region: 20
[2025-06-01 14:00:32] 2025-06-01 12:00:18,817 | INFO     | sum of square deviations: 18252584090.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,822 | INFO     | sum of deviations: 11031927957.999998
[2025-06-01 14:00:32] 2025-06-01 12:00:18,822 | INFO     | mean x: 1748766965.0
[2025-06-01 14:00:32] 2025-06-01 12:00:18,822 | INFO     | mean y: 2306625.580976864
[2025-06-01 14:00:32] 2025-06-01 12:00:18,822 | INFO     | -- intersect: -1054654464.3164212
[2025-06-01 14:00:32] 2025-06-01 12:00:18,822 | INFO     | intersect: -1054654464.3164212
[2025-06-01 14:00:32] 2025-06-01 12:00:18,823 | INFO     | chi2: 0.03789057057252682
[2025-06-01 14:00:32] 2025-06-01 12:00:18,823 | INFO     | -- intersect: -1054654464.3164212
[2025-06-01 14:00:32] 2025-06-01 12:00:18,823 | INFO     | current memory leak: 0.60 B/s (using 389 data points, chi2=0.04)
[2025-06-01 14:00:32] 2025-06-01 12:00:18,823 | INFO     | ..............................
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . Timing measurements:
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . get job = 0 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . initial setup = 2 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . payload setup = 8 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . stage-in = 0 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . payload execution = 25297 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . stage-out = 1 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,824 | INFO     | . log creation = 0 s
[2025-06-01 14:00:32] 2025-06-01 12:00:18,825 | INFO     | ..............................
[2025-06-01 14:00:32] 2025-06-01 12:00:19,058 | INFO     | 
[2025-06-01 14:00:32] 2025-06-01 12:00:19,058 | INFO     | job summary report
[2025-06-01 14:00:32] 2025-06-01 12:00:19,059 | INFO     | --------------------------------------------------
[2025-06-01 14:00:32] 2025-06-01 12:00:19,059 | INFO     | PanDA job id: 6668231968
[2025-06-01 14:00:32] 2025-06-01 12:00:19,059 | INFO     | task id: 44871837
[2025-06-01 14:00:32] 2025-06-01 12:00:19,060 | INFO     | errors: (none)
[2025-06-01 14:00:32] 2025-06-01 12:00:19,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 14:00:32] 2025-06-01 12:00:19,060 | INFO     | pilot state: finished 
[2025-06-01 14:00:32] 2025-06-01 12:00:19,061 | INFO     | transexitcode: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:19,061 | INFO     | exeerrorcode: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:19,061 | INFO     | exeerrordiag: 
[2025-06-01 14:00:32] 2025-06-01 12:00:19,062 | INFO     | exitcode: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:19,062 | INFO     | exitmsg: OK
[2025-06-01 14:00:32] 2025-06-01 12:00:19,062 | INFO     | cpuconsumptiontime: 74700 s
[2025-06-01 14:00:32] 2025-06-01 12:00:19,063 | INFO     | nevents: 400
[2025-06-01 14:00:32] 2025-06-01 12:00:19,063 | INFO     | neventsw: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:19,064 | INFO     | pid: 235113
[2025-06-01 14:00:32] 2025-06-01 12:00:19,064 | INFO     | pgrp: 235113
[2025-06-01 14:00:32] 2025-06-01 12:00:19,064 | INFO     | corecount: 3
[2025-06-01 14:00:32] 2025-06-01 12:00:19,065 | INFO     | event service: False
[2025-06-01 14:00:32] 2025-06-01 12:00:19,065 | INFO     | sizes: {0: 2405070, 1: 2405269, 5: 2405475, 12: 2405531, 25309: 2441124, 25312: 2450079, 25313: 2450263, 25322: 2450433}
[2025-06-01 14:00:32] 2025-06-01 12:00:19,065 | INFO     | --------------------------------------------------
[2025-06-01 14:00:32] 2025-06-01 12:00:19,066 | INFO     | 
[2025-06-01 14:00:32] 2025-06-01 12:00:19,066 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-01 14:00:32] 2025-06-01 12:00:19,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,101 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 14:00:32] 2025-06-01 12:00:19,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 14:00:32] 2025-06-01 12:00:19,101 | INFO     | job 6668231968 has completed (purged errors)
[2025-06-01 14:00:32] 2025-06-01 12:00:19,102 | INFO     | overall cleanup function is called
[2025-06-01 14:00:32] 2025-06-01 12:00:20,111 | INFO     | --- collectZombieJob: --- 10, [235113]
[2025-06-01 14:00:32] 2025-06-01 12:00:20,111 | INFO     | zombie collector waiting for pid 235113
[2025-06-01 14:00:32] 2025-06-01 12:00:20,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 14:00:32] 2025-06-01 12:00:20,112 | INFO     | collected zombie processes
[2025-06-01 14:00:32] 2025-06-01 12:00:20,112 | INFO     | will attempt to kill all subprocesses of pid=235113
[2025-06-01 14:00:32] 2025-06-01 12:00:20,256 | INFO     | process IDs to be killed: [235113] (in reverse order)
[2025-06-01 14:00:32] 2025-06-01 12:00:20,316 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 14:00:32] 2025-06-01 12:00:20,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 14:00:32] 2025-06-01 12:00:20,321 | INFO     | did not find any defunct processes belonging to 235113
[2025-06-01 14:00:32] 2025-06-01 12:00:20,325 | INFO     | did not find any defunct processes belonging to 235113
[2025-06-01 14:00:32] 2025-06-01 12:00:20,325 | INFO     | ready for new job
[2025-06-01 14:00:32] 2025-06-01 12:00:20,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 14:00:32] 2025-06-01 12:00:20,329 | INFO     | **************************************
[2025-06-01 14:00:32] 2025-06-01 12:00:20,329 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 14:00:32] 2025-06-01 12:00:20,329 | INFO     | **************************************
[2025-06-01 14:00:32] 2025-06-01 12:00:20,330 | INFO     | 
[2025-06-01 14:00:32] 2025-06-01 12:00:20,330 | INFO     | architecture information:
[2025-06-01 14:00:32] 2025-06-01 12:00:20,331 | INFO     | executing command: cat /etc/os-release
[2025-06-01 14:00:32] 2025-06-01 12:00:20,351 | INFO     | cat /etc/os-release:
[2025-06-01 14:00:32] NAME="CentOS Linux"
[2025-06-01 14:00:32] VERSION="7 (Core)"
[2025-06-01 14:00:32] ID="centos"
[2025-06-01 14:00:32] ID_LIKE="rhel fedora"
[2025-06-01 14:00:32] VERSION_ID="7"
[2025-06-01 14:00:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 14:00:32] ANSI_COLOR="0;31"
[2025-06-01 14:00:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 14:00:32] HOME_URL="https://www.centos.org/"
[2025-06-01 14:00:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 14:00:32] 
[2025-06-01 14:00:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 14:00:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 14:00:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 14:00:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 14:00:32] 
[2025-06-01 14:00:32] 2025-06-01 12:00:20,352 | INFO     | **************************************
[2025-06-01 14:00:32] 2025-06-01 12:00:20,855 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-01 14:00:32] 2025-06-01 12:00:20,876 | INFO     | sufficient remaining disk space (32546750464 B)
[2025-06-01 14:00:32] 2025-06-01 12:00:20,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 14:00:32] 2025-06-01 12:00:20,878 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 14:00:32] 2025-06-01 12:00:20,878 | INFO     | update_server=False
[2025-06-01 14:00:32] 2025-06-01 12:00:20,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 14:00:32] 2025-06-01 12:00:20,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 14:00:32] 2025-06-01 12:00:20,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 14:00:32] 2025-06-01 12:00:20,879 | INFO     | aborting loop
[2025-06-01 14:00:32] 2025-06-01 12:00:20,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 14:00:32] 2025-06-01 12:00:20,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 14:00:32] 2025-06-01 12:00:20,908 | INFO     | all payload control threads have been joined
[2025-06-01 14:00:32] 2025-06-01 12:00:20,910 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 14:00:32] 2025-06-01 12:00:20,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 14:00:32] 2025-06-01 12:00:20,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 14:00:32] 2025-06-01 12:00:21,267 | INFO     | all data control threads have been joined
[2025-06-01 14:00:32] 2025-06-01 12:00:21,884 | INFO     | [job] retrieve thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:21,884 | INFO     | [job] queue monitor thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:21,885 | INFO     | [job] job monitor thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:21,913 | INFO     | [payload] control thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:22,226 | INFO     | [payload] validate_post thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:22,273 | INFO     | [data] control thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:22,328 | INFO     | all job control threads have been joined
[2025-06-01 14:00:32] 2025-06-01 12:00:22,534 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:22,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:22,885 | INFO     | [data] copytool_out thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,011 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,126 | INFO     | [job] validate thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,127 | INFO     | [data] copytool_in thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,128 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,215 | INFO     | [payload] failed_post thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:23,333 | INFO     | [job] control thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:24,885 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 14:00:32] 2025-06-01 12:00:26,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127948122621760)>', '<ExcThread(monitor, started 127947327395584)>']
[2025-06-01 14:00:32] 2025-06-01 12:00:26,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 14:00:32] 2025-06-01 12:00:26,942 | INFO     | [monitor] control thread has ended
[2025-06-01 14:00:32] 2025-06-01 12:00:31,902 | INFO     | all workflow threads have been joined
[2025-06-01 14:00:32] 2025-06-01 12:00:31,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 14:00:32] 2025-06-01 12:00:31,905 | INFO     | traces error code: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:31,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 14:00:32] 2025-06-01 12:00:32,100 [wrapper] ==== pilot stdout END ====
[2025-06-01 14:00:32] 2025-06-01 12:00:32,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 14:00:32] 2025-06-01 12:00:32,107 [wrapper] pilotpid: 228694
[2025-06-01 14:00:32] 2025-06-01 12:00:32,111 [wrapper] Pilot exit status: 0
[2025-06-01 14:00:32] 2025-06-01 12:00:32,123 [wrapper] pandaids: 6668231968
[2025-06-01 14:00:32] 2025-06-01 12:00:32,150 [wrapper] cleanup supervisor_pilot  273980 228695
[2025-06-01 14:00:32] 2025-06-01 12:00:32,154 [wrapper] Test setup, not cleaning
[2025-06-01 14:00:32] 2025-06-01 12:00:32,158 [wrapper] apfmon messages muted
[2025-06-01 14:00:32] 2025-06-01 12:00:32,161 [wrapper] ==== wrapper stdout END ====
[2025-06-01 14:00:32] 2025-06-01 12:00:32,164 [wrapper] ==== wrapper stderr END ====
[2025-06-01 14:00:32]  *** Error codes and diagnostics ***
[2025-06-01 14:00:32]     "exeErrorCode": 0,
[2025-06-01 14:00:32]     "exeErrorDiag": "",
[2025-06-01 14:00:32]     "pilotErrorCode": 0,
[2025-06-01 14:00:32]     "pilotErrorDiag": "",
[2025-06-01 14:00:32]  *** Listing of results directory ***
[2025-06-01 14:00:32] total 418380
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc    495897 May 28 10:01 pilot3.tar.gz
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc      5111 May 28 10:12 queuedata.json
[2025-06-01 14:00:32] -rwx------ 1 boinc boinc     37140 May 28 10:14 runpilot2-wrapper.sh
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc       100 Jun  1 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 14:00:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  1 06:57 run_atlas
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc       105 Jun  1 06:57 job.xml
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc 222100609 Jun  1 06:57 EVNT.44871834._003168.pool.root.1
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc      9392 Jun  1 06:57 init_data.xml
[2025-06-01 14:00:32] drwxrwx--x 2 boinc boinc      4096 Jun  1 06:57 shared
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc    508875 Jun  1 06:57 input.tar.gz
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc     15093 Jun  1 06:57 start_atlas.sh
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc         0 Jun  1 06:57 boinc_lockfile
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc      2559 Jun  1 06:57 pandaJob.out
[2025-06-01 14:00:32] -rw------- 1 boinc boinc    987420 Jun  1 06:57 agis_schedconf.cvmfs.json
[2025-06-01 14:00:32] drwx------ 4 boinc boinc      4096 Jun  1 06:58 pilot3
[2025-06-01 14:00:32] -rw------- 1 boinc boinc 197110669 Jun  1 13:59 HITS.44871837._081147.pool.root.1
[2025-06-01 14:00:32] -rw------- 1 boinc boinc        95 Jun  1 13:59 pilot_heartbeat.json
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc       530 Jun  1 13:59 boinc_task_state.xml
[2025-06-01 14:00:32] -rw------- 1 boinc boinc      1011 Jun  1 14:00 memory_monitor_summary.json
[2025-06-01 14:00:32] -rw------- 1 boinc boinc   1603667 Jun  1 14:00 agis_ddmendpoints.agis.ALL.json
[2025-06-01 14:00:32] -rw------- 1 boinc boinc    420336 Jun  1 14:00 log.44871837._081147.job.log.tgz.1
[2025-06-01 14:00:32] -rw------- 1 boinc boinc      7646 Jun  1 14:00 heartbeat.json
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc      8192 Jun  1 14:00 boinc_mmap_file
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc        28 Jun  1 14:00 wrapper_checkpoint.txt
[2025-06-01 14:00:32] -rw------- 1 boinc boinc      4360 Jun  1 14:00 pilotlog.txt
[2025-06-01 14:00:32] -rw------- 1 boinc boinc   2264907 Jun  1 14:00 log.44871837._081147.job.log.1
[2025-06-01 14:00:32] -rw------- 1 boinc boinc       357 Jun  1 14:00 output.list
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc       620 Jun  1 14:00 runtime_log
[2025-06-01 14:00:32] -rw------- 1 boinc boinc   2703360 Jun  1 14:00 result.tar.gz
[2025-06-01 14:00:32] -rw------- 1 boinc boinc       653 Jun  1 14:00 sOPMDmd6Qe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRdbKDmhvcFWo.diag
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc      8766 Jun  1 14:00 runtime_log.err
[2025-06-01 14:00:32] -rw-r--r-- 1 boinc boinc     20997 Jun  1 14:00 stderr.txt
[2025-06-01 14:00:32] HITS file was successfully produced:
[2025-06-01 14:00:32] -rw------- 1 boinc boinc 197110669 Jun  1 13:59 shared/HITS.pool.root.1
[2025-06-01 14:00:32]  *** Contents of shared directory: ***
[2025-06-01 14:00:32] total 412552
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc 222100609 Jun  1 06:57 ATLAS.root_0
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc    508875 Jun  1 06:57 input.tar.gz
[2025-06-01 14:00:32] -rw-r--r-- 2 boinc boinc     15093 Jun  1 06:57 start_atlas.sh
[2025-06-01 14:00:32] -rw------- 1 boinc boinc 197110669 Jun  1 13:59 HITS.pool.root.1
[2025-06-01 14:00:32] -rw------- 1 boinc boinc   2703360 Jun  1 14:00 result.tar.gz
14:00:33 (225106): run_atlas exited; CPU time 74846.541291
14:00:33 (225106): called boinc_finish(0)

</stderr_txt>
]]>

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