Name MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm_1
Workunit 232663827
Created 28 May 2025, 14:10:31 UTC
Sent 28 May 2025, 16:57:41 UTC
Report deadline 5 Jun 2025, 16:57:41 UTC
Received 30 May 2025, 17:38:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10874964
Run time 5 hours 25 min 37 sec
CPU time 15 hours 2 min 22 sec
Validate state Valid
Credit 914.80
Device peak FLOPS 12.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.65 GB
Peak swap size 31.45 GB
Peak disk usage 833.53 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:03 (4081719): wrapper (7.7.26015): starting
12:58:03 (4081719): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 12:58:03] Arguments: --nthreads 8
[2025-05-28 12:58:03] Threads: 8
[2025-05-28 12:58:03] Checking for CVMFS
[2025-05-28 12:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 12:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 12:58:04] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 12:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 12:58:04] 2.12.6.0 8572 27499 296756 146525 0 947 20323383 32935937 32416 16776704 0 316821841 99.605 328408074 22706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 12:58:04] CVMFS is ok
[2025-05-28 12:58:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 12:58:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 12:58:04] Further information can be found at the LHC@home message board.
[2025-05-28 12:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 12:58:04] Checking for apptainer binary...
[2025-05-28 12:58:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 12:58:04] Running /usr/bin/apptainer --version
[2025-05-28 12:58:04] apptainer version 1.4.1-1.el9
[2025-05-28 12:58:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 12:58:05] c7-2-38.aglt2.org
[2025-05-28 12:58:05] apptainer works
[2025-05-28 12:58:05] Set ATHENA_PROC_NUMBER=8
[2025-05-28 12:58:05] Set ATHENA_CORE_NUMBER=8
[2025-05-28 12:58:05] Starting ATLAS job with PandaID=6668439134
[2025-05-28 12:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:40:10 (4081719): BOINC client no longer exists - exiting
15:40:10 (4081719): timer handler: client dead, exiting
10:30:45 (647191): wrapper (7.7.26015): starting
10:30:45 (647191): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 10:30:45] Arguments: --nthreads 8
[2025-05-30 10:30:45] Threads: 8
[2025-05-30 10:30:45] This job has been restarted, cleaning up previous attempt
[2025-05-30 10:30:45] Checking for CVMFS
[2025-05-30 10:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 10:30:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 10:30:45] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 10:30:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 10:30:46] 2.12.6.0 8572 30232 364928 146602 1 708 23903026 32935937 17381 16776704 0 363470877 99.609 375084705 22548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-30 10:30:46] CVMFS is ok
[2025-05-30 10:30:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 10:30:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 10:30:46] Further information can be found at the LHC@home message board.
[2025-05-30 10:30:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 10:30:46] Checking for apptainer binary...
[2025-05-30 10:30:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 10:30:46] Running /usr/bin/apptainer --version
[2025-05-30 10:30:46] apptainer version 1.4.1-1.el9
[2025-05-30 10:30:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 10:30:46] c7-2-38.aglt2.org
[2025-05-30 10:30:46] apptainer works
[2025-05-30 10:30:46] Set ATHENA_PROC_NUMBER=8
[2025-05-30 10:30:46] Set ATHENA_CORE_NUMBER=8
[2025-05-30 10:30:46] Starting ATLAS job with PandaID=6668439134
[2025-05-30 10:30:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 10:33:59] Job failed
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-05-30 10:33:59] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-05-30 10:33:59] + mv ATLAS.root_0 EVNT.44871834._003256.pool.root.1
[2025-05-30 10:33:59] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.44871834._003256.pool.root.1&#226;&#128;&#153; are the same file
[2025-05-30 10:33:59] + tar --strip-components=5 -xvf input.tar.gz
[2025-05-30 10:33:59] + umask 077
[2025-05-30 10:33:59] ++ date +%s
[2025-05-30 10:33:59] + ACCOUNTING_STARTTIME=1748615446
[2025-05-30 10:33:59] + echo 'Detecting resource accounting method available for the job.'
[2025-05-30 10:33:59] Detecting resource accounting method available for the job.
[2025-05-30 10:33:59] + JOB_ACCOUNTING=
[2025-05-30 10:33:59] + command -v arc-job-cgroup
[2025-05-30 10:33:59] + '[' -z '' ']'
[2025-05-30 10:33:59] + GNU_TIME=/usr/bin/time
[2025-05-30 10:33:59] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-05-30 10:33:59] Looking for /usr/bin/time tool for accounting measurements
[2025-05-30 10:33:59] + '[' '!' -z /usr/bin/time ']'
[2025-05-30 10:33:59] + /usr/bin/time --version
[2025-05-30 10:33:59] + echo 'GNU time found and will be used for job accounting.'
[2025-05-30 10:33:59] GNU time found and will be used for job accounting.
[2025-05-30 10:33:59] + JOB_ACCOUNTING=gnutime
[2025-05-30 10:33:59] + '[' -z gnutime ']'
[2025-05-30 10:33:59] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-30 10:33:59] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-30 10:33:59] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-28/BOINC_MCORE/6668439134.out
[2025-05-30 10:33:59] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-28/BOINC_MCORE/6668439134.out
[2025-05-30 10:33:59] + export PILOT_NOKILL=YES
[2025-05-30 10:33:59] + PILOT_NOKILL=YES
[2025-05-30 10:33:59] + export GRID_GLOBAL_JOBID=MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm
[2025-05-30 10:33:59] + GRID_GLOBAL_JOBID=MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm
[2025-05-30 10:33:59] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm
[2025-05-30 10:33:59] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm
[2025-05-30 10:33:59] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-30 10:33:59] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-30 10:33:59] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-30 10:33:59] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/2
[2025-05-30 10:33:59] + RUNTIME_JOB_STDIN=/dev/null
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/2/log.44871837._083470.job.log.1
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/2/log.44871837._083470.job.log.1
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2.diag
[2025-05-30 10:33:59] + '[' '!' -z '' ']'
[2025-05-30 10:33:59] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-05-30 10:33:59] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-05-30 10:33:59] + RUNTIME_FRONTEND_SEES_NODE=
[2025-05-30 10:33:59] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-05-30 10:33:59] + '[' '!' -z '' ']'
[2025-05-30 10:33:59] + '[' -z yes ']'
[2025-05-30 10:33:59] ++ pwd
[2025-05-30 10:33:59] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag
[2025-05-30 10:33:59] + runtimeenvironments=
[2025-05-30 10:33:59] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-30 10:33:59] + RTE_function_0 1
[2025-05-30 10:33:59] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-30 10:33:59] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-30 10:33:59] + export BOINC_APP=ATLAS
[2025-05-30 10:33:59] + BOINC_APP=ATLAS
[2025-05-30 10:33:59] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-30 10:33:59] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-30 10:33:59] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-30 10:33:59] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-30 10:33:59] + '[' -z 1 ']'
[2025-05-30 10:33:59] + '[' 1 == 1 ']'
[2025-05-30 10:33:59] + shift
[2025-05-30 10:33:59] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-05-30 10:33:59] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-05-30 10:33:59] + '[' 0 -ne 0 ']'
[2025-05-30 10:33:59] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-05-30 10:33:59] + '[' -f /etc/os-release ']'
[2025-05-30 10:33:59] +++ cat /etc/os-release
[2025-05-30 10:33:59] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-05-30 10:33:59] +++ NAME='CentOS Linux'
[2025-05-30 10:33:59] +++ VERSION='7 (Core)'
[2025-05-30 10:33:59] +++ ID=centos
[2025-05-30 10:33:59] +++ ID_LIKE='rhel fedora'
[2025-05-30 10:33:59] +++ VERSION_ID=7
[2025-05-30 10:33:59] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-05-30 10:33:59] +++ ANSI_COLOR='0;31'
[2025-05-30 10:33:59] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-05-30 10:33:59] +++ HOME_URL=https://www.centos.org/
[2025-05-30 10:33:59] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-05-30 10:33:59] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-05-30 10:33:59] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-05-30 10:33:59] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-05-30 10:33:59] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-05-30 10:33:59] ++ echo 'CentOS Linux 7 (Core)'
[2025-05-30 10:33:59] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-05-30 10:33:59] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-05-30 10:33:59] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-05-30 10:33:59] + HOME=/tmp/boinchome/slots/2
[2025-05-30 10:33:59] + export HOME
[2025-05-30 10:33:59] + cd /tmp/boinchome/slots/2
[2025-05-30 10:33:59] + '[' '!' -z '' ']'
[2025-05-30 10:33:59] + '[' -z '' ']'
[2025-05-30 10:33:59] ++ /bin/hostname -f
[2025-05-30 10:33:59] + nodename=c7-2-38.aglt2.org
[2025-05-30 10:33:59] + echo nodename=c7-2-38.aglt2.org
[2025-05-30 10:33:59] + echo Processors=2
[2025-05-30 10:33:59] + echo Nodecount=1
[2025-05-30 10:33:59] + echo Benchmark=HEPSPEC:1.0
[2025-05-30 10:33:59] + executable=./runpilot2-wrapper.sh
[2025-05-30 10:33:59] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-05-30 10:33:59] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-05-30 10:33:59] ++ tr -d '\0'
[2025-05-30 10:33:59] ++ head -n 1
[2025-05-30 10:33:59] + line1='#!/bin/bash'
[2025-05-30 10:33:59] ++ echo '#!/bin/bash'
[2025-05-30 10:33:59] ++ sed -n 's/^#! *//p'
[2025-05-30 10:33:59] + shebang=/bin/bash
[2025-05-30 10:33:59] ++ echo /bin/bash
[2025-05-30 10:33:59] ++ awk '{print $1}'
[2025-05-30 10:33:59] + interpreter=/bin/bash
[2025-05-30 10:33:59] + '[' /bin/bash = /usr/bin/env ']'
[2025-05-30 10:33:59] + '[' x/bin/bash = x ']'
[2025-05-30 10:33:59] + type /bin/bash
[2025-05-30 10:33:59] + '[' xgnutime = xgnutime ']'
[2025-05-30 10:33:59] + /usr/bin/time -o /tmp/boinchome/slots/2/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-05-30 10:33:59] + RESULT=2
[2025-05-30 10:33:59] + sed -i -e /nodename=/d /tmp/boinchome/slots/2/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag
[2025-05-30 10:33:59] ++ grep domain_name init_data.xml
[2025-05-30 10:33:59] ++ sed -e 's# #_#g'
[2025-05-30 10:33:59] ++ awk -F '<' '{print $1}'
[2025-05-30 10:33:59] ++ awk -F '>' '{print $2}'
[2025-05-30 10:33:59] + hostname=c7-2-38.aglt2.org
[2025-05-30 10:33:59] ++ grep user_name init_data.xml
[2025-05-30 10:33:59] ++ awk -F '<' '{print $1}'
[2025-05-30 10:33:59] ++ sed -e 's# #_#g'
[2025-05-30 10:33:59] ++ awk -F '>' '{print $2}'
[2025-05-30 10:33:59] + username=AGLT2
[2025-05-30 10:33:59] + nodename=AGLT2@c7-2-38.aglt2.org
[2025-05-30 10:33:59] + echo nodename=AGLT2@c7-2-38.aglt2.org
[2025-05-30 10:33:59] + '[' -n 8 ']'
[2025-05-30 10:33:59] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/2/MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag
[2025-05-30 10:33:59] + echo exitcode=2
[2025-05-30 10:33:59] + runtimeenvironments=
[2025-05-30 10:33:59] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-30 10:33:59] + RTE_function_0 2
[2025-05-30 10:33:59] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-30 10:33:59] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-30 10:33:59] + export BOINC_APP=ATLAS
[2025-05-30 10:33:59] + BOINC_APP=ATLAS
[2025-05-30 10:33:59] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-30 10:33:59] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-30 10:33:59] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-30 10:33:59] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-30 10:33:59] + '[' -z 2 ']'
[2025-05-30 10:33:59] + '[' 2 == 1 ']'
[2025-05-30 10:33:59] + '[' 0 -ne 0 ']'
[2025-05-30 10:33:59] + echo 'zip all output files'
[2025-05-30 10:33:59] + flist='*.diag '
[2025-05-30 10:33:59] + for f in ./heartbeat.json ./output.list ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1 ./gmlog/
[2025-05-30 10:33:59] + '[' -e ./heartbeat.json ']'
[2025-05-30 10:33:59] + flist='*.diag  ./heartbeat.json'
[2025-05-30 10:33:59] + for f in ./heartbeat.json ./output.list ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1 ./gmlog/
[2025-05-30 10:33:59] + '[' -e ./output.list ']'
[2025-05-30 10:33:59] + for f in ./heartbeat.json ./output.list ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1 ./gmlog/
[2025-05-30 10:33:59] + '[' -e ./log.44871837._083470.job.log.1 ']'
[2025-05-30 10:33:59] + flist='*.diag  ./heartbeat.json ./log.44871837._083470.job.log.1'
[2025-05-30 10:33:59] + for f in ./heartbeat.json ./output.list ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1 ./gmlog/
[2025-05-30 10:33:59] + '[' -e ./log.44871837._083470.job.log.1 ']'
[2025-05-30 10:33:59] + flist='*.diag  ./heartbeat.json ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1'
[2025-05-30 10:33:59] + for f in ./heartbeat.json ./output.list ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1 ./gmlog/
[2025-05-30 10:33:59] + '[' -e ./gmlog/ ']'
[2025-05-30 10:33:59] + '[' -f output.list ']'
[2025-05-30 10:33:59] + tar cvf result.tar.gz MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag ./heartbeat.json ./log.44871837._083470.job.log.1 ./log.44871837._083470.job.log.1
[2025-05-30 10:33:59] + '[' xgnutime = xcgroup ']'
[2025-05-30 10:33:59] + '[' -n '' ']'
[2025-05-30 10:33:59] + '[' -n '' ']'
[2025-05-30 10:33:59] ++ date +%s
[2025-05-30 10:33:59] + ACCOUNTING_ENDTIME=1748615639
[2025-05-30 10:33:59] ++ date -d '1970-01-01 UTC 1748615446 seconds' +%Y%m%d%H%M%SZ
[2025-05-30 10:33:59] + echo LRMSStartTime=20250530103046Z
[2025-05-30 10:33:59] ++ date -d '1970-01-01 UTC 1748615639 seconds' +%Y%m%d%H%M%SZ
[2025-05-30 10:33:59] + echo LRMSEndTime=20250530103359Z
[2025-05-30 10:33:59] + echo walltime=193
[2025-05-30 10:33:59] + echo exitcode=2
[2025-05-30 10:33:59] + exit 2
[2025-05-30 10:33:59] ./PanDA_Pilot-6668439134/PoolFileCatalog.xml
[2025-05-30 10:33:59] ./PanDA_Pilot-6668439134/prmon.log
[2025-05-30 10:33:59] ./PanDA_Pilot-6668439134/pilotlog.txt
[2025-05-30 10:33:59] ./PanDA_Pilot-6668439134/log.EVNTtoHITS
[2025-05-30 10:33:59] ./log.44871837._083470.job.log.1
[2025-05-30 10:33:59] ./runtime_log.err
[2025-05-30 10:33:59] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-05-30 10:33:59] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-05-30 10:33:59] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-05-30 10:33:59] ./pilot3/pilot/util/realtimelogger.py
[2025-05-30 10:33:59] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-05-30 10:33:59] ./pilot3/pilot/util/loggingsupport.py
[2025-05-30 10:33:59] ./runtime_log
[2025-05-30 10:33:59] ./pilotlog.txt
10:49:49 (1081854): wrapper (7.7.26015): starting
10:49:49 (1081854): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 10:49:49] Arguments: --nthreads 8
[2025-05-30 10:49:49] Threads: 8
[2025-05-30 10:49:49] This job has been restarted, cleaning up previous attempt
[2025-05-30 10:49:49] Checking for CVMFS
[2025-05-30 10:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 10:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 10:49:49] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 10:49:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 10:49:50] 2.12.6.0 8572 30251 385192 146602 2 1029 25956324 32935936 22415 16776704 0 363892838 99.608 375785107 22546 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-30 10:49:50] CVMFS is ok
[2025-05-30 10:49:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 10:49:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 10:49:50] Further information can be found at the LHC@home message board.
[2025-05-30 10:49:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 10:49:50] Checking for apptainer binary...
[2025-05-30 10:49:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 10:49:50] Running /usr/bin/apptainer --version
[2025-05-30 10:49:50] apptainer version 1.4.1-1.el9
[2025-05-30 10:49:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 10:49:50] c7-2-38.aglt2.org
[2025-05-30 10:49:50] apptainer works
[2025-05-30 10:49:50] Set ATHENA_PROC_NUMBER=8
[2025-05-30 10:49:50] Set ATHENA_CORE_NUMBER=8
[2025-05-30 10:49:50] Starting ATLAS job with PandaID=6668439134
[2025-05-30 10:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 13:33:56]  *** The last 200 lines of the pilot log: ***
[2025-05-30 13:33:56] 2025-05-30 17:33:42,427 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6668439134/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,428 | INFO     | extracted standard info from prmon json
[2025-05-30 13:33:56] 2025-05-30 17:33:42,428 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 13:33:56] 2025-05-30 17:33:42,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 13:33:56] 2025-05-30 17:33:42,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 13:33:56] 2025-05-30 17:33:42,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 13:33:56] 2025-05-30 17:33:42,431 | INFO     | fitting pss+swap vs Time
[2025-05-30 13:33:56] 2025-05-30 17:33:42,431 | INFO     | sum of square deviations: 1294014960.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,432 | INFO     | sum of deviations: 26965799933.999992
[2025-05-30 13:33:56] 2025-05-30 17:33:42,432 | INFO     | mean x: 1748621514.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,432 | INFO     | mean y: 2139220.465838509
[2025-05-30 13:33:56] 2025-05-30 17:33:42,432 | INFO     | -- intersect: -36437144222.44905
[2025-05-30 13:33:56] 2025-05-30 17:33:42,432 | INFO     | intersect: -36437144222.44905
[2025-05-30 13:33:56] 2025-05-30 17:33:42,433 | INFO     | chi2: 2.85662026405471
[2025-05-30 13:33:56] 2025-05-30 17:33:42,433 | INFO     | sum of square deviations: 1177156955.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | sum of deviations: 35018497560.49999
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | mean x: 1748621361.5
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | mean y: 2149422.262820513
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | -- intersect: -52016481247.02285
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | intersect: -52016481247.02285
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | chi2: 2.0889029595738347
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | current chi2=2.0889029595738347 (change=26.875021301962317 %)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,434 | INFO     | sum of square deviations: 1067554900.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | sum of deviations: 33809542068.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | mean x: 1748621209.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | mean y: 2147754.609271523
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | -- intersect: -55376814326.57506
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | intersect: -55376814326.57506
[2025-05-30 13:33:56] 2025-05-30 17:33:42,435 | INFO     | chi2: 2.0882969122832864
[2025-05-30 13:33:56] 2025-05-30 17:33:42,436 | INFO     | current chi2=2.0882969122832864 (change=0.029012706778484946 %)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,436 | INFO     | right removable region: 150
[2025-05-30 13:33:56] 2025-05-30 17:33:42,436 | INFO     | sum of square deviations: 1177156955.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | sum of deviations: -1533399852.5
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | mean x: 1748621666.5
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | mean y: 2176123.0064102565
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | -- intersect: 2279982998.377082
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | intersect: 2279982998.377082
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | chi2: 1.0084456472128875
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | current chi2=1.0084456472128875 (change=64.6979453341309 %)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,437 | INFO     | sum of square deviations: 1067554900.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | sum of deviations: -8793361182.000002
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | mean x: 1748621819.0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | mean y: 2186152.0066225166
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | -- intersect: 14405439066.861712
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | intersect: 14405439066.861712
[2025-05-30 13:33:56] 2025-05-30 17:33:42,438 | INFO     | chi2: 0.8789157749015706
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | current chi2=0.8789157749015706 (change=12.844507055914 %)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | left removable region: 20
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | sum of square deviations: 681212772.5
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | sum of deviations: 2682016828.999999
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | mean x: 1748621788.5
[2025-05-30 13:33:56] 2025-05-30 17:33:42,439 | INFO     | mean y: 2193123.953846154
[2025-05-30 13:33:56] 2025-05-30 17:33:42,440 | INFO     | -- intersect: -6882341713.967263
[2025-05-30 13:33:56] 2025-05-30 17:33:42,440 | INFO     | intersect: -6882341713.967263
[2025-05-30 13:33:56] 2025-05-30 17:33:42,440 | INFO     | chi2: 0.06508203102641537
[2025-05-30 13:33:56] 2025-05-30 17:33:42,440 | INFO     | -- intersect: -6882341713.967263
[2025-05-30 13:33:56] 2025-05-30 17:33:42,440 | INFO     | current memory leak: 3.94 B/s (using 130 data points, chi2=0.07)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | ..............................
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . Timing measurements:
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . get job = 0 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . initial setup = 1 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . payload setup = 8 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . stage-in = 0 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . payload execution = 9777 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . stage-out = 2 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | . log creation = 0 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,441 | INFO     | ..............................
[2025-05-30 13:33:56] 2025-05-30 17:33:42,515 | INFO     | 
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | job summary report
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | --------------------------------------------------
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | PanDA job id: 6668439134
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | task id: 44871837
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | errors: (none)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | pilot state: finished 
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | transexitcode: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | exeerrorcode: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | exeerrordiag: 
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | exitcode: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | exitmsg: OK
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | cpuconsumptiontime: 40880 s
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | nevents: 400
[2025-05-30 13:33:56] 2025-05-30 17:33:42,516 | INFO     | neventsw: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | pid: 1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | pgrp: 1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | corecount: 8
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | event service: False
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | sizes: {0: 2405234, 6: 2405440, 11: 2405468, 9789: 2433814, 9792: 2442755, 9795: 2442811, 9803: 2443109}
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | --------------------------------------------------
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | 
[2025-05-30 13:33:56] 2025-05-30 17:33:42,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 13:33:56] 2025-05-30 17:33:42,543 | INFO     | job 6668439134 has completed (purged errors)
[2025-05-30 13:33:56] 2025-05-30 17:33:42,543 | INFO     | overall cleanup function is called
[2025-05-30 13:33:56] 2025-05-30 17:33:43,560 | INFO     | --- collectZombieJob: --- 10, [1118722]
[2025-05-30 13:33:56] 2025-05-30 17:33:43,560 | INFO     | zombie collector waiting for pid 1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:43,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 13:33:56] 2025-05-30 17:33:43,560 | INFO     | collected zombie processes
[2025-05-30 13:33:56] 2025-05-30 17:33:43,560 | INFO     | will attempt to kill all subprocesses of pid=1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:44,148 | INFO     | process IDs to be killed: [1118722] (in reverse order)
[2025-05-30 13:33:56] 2025-05-30 17:33:44,368 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 13:33:56] 2025-05-30 17:33:44,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 13:33:56] 2025-05-30 17:33:44,393 | INFO     | did not find any defunct processes belonging to 1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:44,417 | INFO     | did not find any defunct processes belonging to 1118722
[2025-05-30 13:33:56] 2025-05-30 17:33:44,417 | INFO     | ready for new job
[2025-05-30 13:33:56] 2025-05-30 17:33:44,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 13:33:56] 2025-05-30 17:33:44,419 | INFO     | **************************************
[2025-05-30 13:33:56] 2025-05-30 17:33:44,419 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 13:33:56] 2025-05-30 17:33:44,419 | INFO     | **************************************
[2025-05-30 13:33:56] 2025-05-30 17:33:44,419 | INFO     | 
[2025-05-30 13:33:56] 2025-05-30 17:33:44,438 | INFO     | architecture information:
[2025-05-30 13:33:56] 2025-05-30 17:33:44,439 | INFO     | executing command: cat /etc/os-release
[2025-05-30 13:33:56] 2025-05-30 17:33:44,455 | INFO     | cat /etc/os-release:
[2025-05-30 13:33:56] NAME="CentOS Linux"
[2025-05-30 13:33:56] VERSION="7 (Core)"
[2025-05-30 13:33:56] ID="centos"
[2025-05-30 13:33:56] ID_LIKE="rhel fedora"
[2025-05-30 13:33:56] VERSION_ID="7"
[2025-05-30 13:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 13:33:56] ANSI_COLOR="0;31"
[2025-05-30 13:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 13:33:56] HOME_URL="https://www.centos.org/"
[2025-05-30 13:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 13:33:56] 
[2025-05-30 13:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 13:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 13:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 13:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 13:33:56] 
[2025-05-30 13:33:56] 2025-05-30 17:33:44,456 | INFO     | **************************************
[2025-05-30 13:33:56] 2025-05-30 17:33:44,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-30 13:33:56] 2025-05-30 17:33:45,039 | INFO     | sufficient remaining disk space (74622959616 B)
[2025-05-30 13:33:56] 2025-05-30 17:33:45,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 13:33:56] 2025-05-30 17:33:45,040 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 13:33:56] 2025-05-30 17:33:45,040 | INFO     | update_server=False
[2025-05-30 13:33:56] 2025-05-30 17:33:45,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 13:33:56] 2025-05-30 17:33:45,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 13:33:56] 2025-05-30 17:33:45,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 13:33:56] 2025-05-30 17:33:45,047 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 13:33:56] 2025-05-30 17:33:45,047 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 13:33:56] 2025-05-30 17:33:45,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 13:33:56] 2025-05-30 17:33:45,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 13:33:56] 2025-05-30 17:33:45,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:33:56] 2025-05-30 17:33:45,239 | INFO     | aborting loop
[2025-05-30 13:33:56] 2025-05-30 17:33:45,301 | INFO     | all payload control threads have been joined
[2025-05-30 13:33:56] 2025-05-30 17:33:45,499 | INFO     | all job control threads have been joined
[2025-05-30 13:33:56] 2025-05-30 17:33:45,946 | INFO     | all data control threads have been joined
[2025-05-30 13:33:56] 2025-05-30 17:33:46,045 | INFO     | [job] retrieve thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,245 | INFO     | [job] job monitor thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,278 | INFO     | [job] validate thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,307 | INFO     | [payload] control thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,507 | INFO     | [job] control thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,790 | INFO     | [data] copytool_in thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,938 | INFO     | [payload] validate_post thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:46,951 | INFO     | [data] control thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,051 | INFO     | [data] copytool_out thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,143 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,257 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,260 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,443 | INFO     | [payload] failed_post thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:47,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:33:56] 2025-05-30 17:33:48,544 | INFO     | [job] queue monitor thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:49,058 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 13:33:56] 2025-05-30 17:33:50,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651357734720)>', '<ExcThread(monitor, started 139650576406272)>']
[2025-05-30 13:33:56] 2025-05-30 17:33:51,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 13:33:56] 2025-05-30 17:33:51,091 | INFO     | [monitor] control thread has ended
[2025-05-30 13:33:56] 2025-05-30 17:33:55,790 | INFO     | all workflow threads have been joined
[2025-05-30 13:33:56] 2025-05-30 17:33:55,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 13:33:56] 2025-05-30 17:33:55,791 | INFO     | traces error code: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:55,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 13:33:56] 2025-05-30 17:33:55,942 [wrapper] ==== pilot stdout END ====
[2025-05-30 13:33:56] 2025-05-30 17:33:55,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 13:33:56] 2025-05-30 17:33:55,947 [wrapper] pilotpid: 1095248
[2025-05-30 13:33:56] 2025-05-30 17:33:55,968 [wrapper] Pilot exit status: 0
[2025-05-30 13:33:56] 2025-05-30 17:33:55,984 [wrapper] pandaids: 6668439134 6668439134 6668439134
[2025-05-30 13:33:56] 2025-05-30 17:33:56,123 [wrapper] cleanup supervisor_pilot 3899656 1095249
[2025-05-30 13:33:56] 2025-05-30 17:33:56,128 [wrapper] Test setup, not cleaning
[2025-05-30 13:33:56] 2025-05-30 17:33:56,131 [wrapper] apfmon messages muted
[2025-05-30 13:33:56] 2025-05-30 17:33:56,133 [wrapper] ==== wrapper stdout END ====
[2025-05-30 13:33:56] 2025-05-30 17:33:56,135 [wrapper] ==== wrapper stderr END ====
[2025-05-30 13:33:56]  *** Error codes and diagnostics ***
[2025-05-30 13:33:56]     "exeErrorCode": 0,
[2025-05-30 13:33:56]     "exeErrorDiag": "",
[2025-05-30 13:33:56]     "pilotErrorCode": 0,
[2025-05-30 13:33:56]     "pilotErrorDiag": "",
[2025-05-30 13:33:56]  *** Listing of results directory ***
[2025-05-30 13:33:56] total 637084
[2025-05-30 13:33:56] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:04 pilot3.tar.gz
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas      5111 May 28 07:08 queuedata.json
[2025-05-30 13:33:56] -rwx------. 1 boincer umatlas     37140 May 28 07:09 runpilot2-wrapper.sh
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas       100 May 28 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 13:33:56] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 12:58 run_atlas
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas       105 May 28 12:58 job.xml
[2025-05-30 13:33:56] -rw-r--r--. 3 boincer umatlas 224839648 May 28 12:58 EVNT.44871834._003256.pool.root.1
[2025-05-30 13:33:56] -rw-r--r--. 3 boincer umatlas 224839648 May 28 12:58 ATLAS.root_0
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas     15093 May 28 12:58 start_atlas.sh
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas    508880 May 28 12:58 input.tar.gz
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas         0 May 28 12:58 boinc_lockfile
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas         0 May 30 10:30 wrapper_sigint_670929
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas         0 May 30 10:33 wrapper_sigkill_670929
[2025-05-30 13:33:56] drwxrwx--x. 2 boincer umatlas      4096 May 30 10:33 shared
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas      2559 May 30 10:49 pandaJob.out
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas    987361 May 30 10:50 agis_schedconf.cvmfs.json
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas      6933 May 30 13:31 init_data.xml
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas 196466347 May 30 13:32 HITS.44871837._083470.pool.root.1
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas       531 May 30 13:33 boinc_task_state.xml
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas        99 May 30 13:33 pilot_heartbeat.json
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas      1052 May 30 13:33 memory_monitor_summary.json
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas   1603667 May 30 13:33 agis_ddmendpoints.agis.ALL.json
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas    345225 May 30 13:33 log.44871837._083470.job.log.tgz.1
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas      7718 May 30 13:33 heartbeat.json
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas      8192 May 30 13:33 boinc_mmap_file
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas        28 May 30 13:33 wrapper_checkpoint.txt
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas      4476 May 30 13:33 pilotlog.txt
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas    839520 May 30 13:33 log.44871837._083470.job.log.1
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas       357 May 30 13:33 output.list
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas       620 May 30 13:33 runtime_log
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas   1208320 May 30 13:33 result.tar.gz
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas      8739 May 30 13:33 runtime_log.err
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas      1388 May 30 13:33 MTzKDmIqTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaPTKDmFpWKXm.diag
[2025-05-30 13:33:56] -rw-r--r--. 1 boincer umatlas     38251 May 30 13:33 stderr.txt
[2025-05-30 13:33:56] HITS file was successfully produced:
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas 196466347 May 30 13:32 shared/HITS.pool.root.1
[2025-05-30 13:33:56]  *** Contents of shared directory: ***
[2025-05-30 13:33:56] total 413136
[2025-05-30 13:33:56] -rw-r--r--. 3 boincer umatlas 224839648 May 28 12:58 ATLAS.root_0
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas     15093 May 28 12:58 start_atlas.sh
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas    508880 May 28 12:58 input.tar.gz
[2025-05-30 13:33:56] -rw-------. 1 boincer umatlas 196466347 May 30 13:32 HITS.pool.root.1
[2025-05-30 13:33:56] -rw-r--r--. 2 boincer umatlas   1208320 May 30 13:33 result.tar.gz
13:33:57 (1081854): run_atlas exited; CPU time 41342.157762
13:33:57 (1081854): called boinc_finish(0)

</stderr_txt>
]]>


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