Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:47:47 (829127): wrapper (7.7.26015): starting
18:47:47 (829127): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 18:47:47] Arguments: --nthreads 4
[2025-06-03 18:47:47] Threads: 4
[2025-06-03 18:47:47] Checking for CVMFS
[2025-06-03 18:47:47] No cvmfs_config command found, will try listing directly
[2025-06-03 18:47:47] CVMFS is ok
[2025-06-03 18:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 18:47:47] Further information can be found at the LHC@home message board.
[2025-06-03 18:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:47:47] Checking for apptainer binary...
[2025-06-03 18:47:47] which: no apptainer in ((null))
[2025-06-03 18:47:47] apptainer is not installed, using version from CVMFS
[2025-06-03 18:47:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:47:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-03 18:47:47] apptainer works
[2025-06-03 18:47:47] Set ATHENA_PROC_NUMBER=4
[2025-06-03 18:47:47] Set ATHENA_CORE_NUMBER=4
[2025-06-03 18:47:47] Starting ATLAS job with PandaID=6668326704
[2025-06-03 18:47:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:18:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:18:24] 2025-06-03 21:17:55,926 | INFO     | executing command: lscpu
[2025-06-03 23:18:24] 2025-06-03 21:17:55,974 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:18:24] 2025-06-03 21:17:57,039 | INFO     | monitor loop #1173: job 0:6668326704 is in state 'finished'
[2025-06-03 23:18:24] 2025-06-03 21:17:57,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,542 | INFO     | monitor loop #1174: job 0:6668326704 is in state 'finished'
[2025-06-03 23:18:24] 2025-06-03 21:17:59,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,623 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:18:24] 2025-06-03 21:17:59,624 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6668326704/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,625 | INFO     | extracted standard info from prmon json
[2025-06-03 23:18:24] 2025-06-03 21:17:59,625 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:18:24] 2025-06-03 21:17:59,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:18:24] 2025-06-03 21:17:59,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:18:24] 2025-06-03 21:17:59,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:18:24] 2025-06-03 21:17:59,632 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:18:24] 2025-06-03 21:17:59,632 | INFO     | sum of square deviations: 5770452380.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,634 | INFO     | sum of deviations: -26528577431.999996
[2025-06-03 23:18:24] 2025-06-03 21:17:59,635 | INFO     | mean x: 1748977357.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,635 | INFO     | mean y: 2370331.5132075474
[2025-06-03 23:18:24] 2025-06-03 21:17:59,635 | INFO     | -- intersect: 8042967183.6423645
[2025-06-03 23:18:24] 2025-06-03 21:17:59,635 | INFO     | intersect: 8042967183.6423645
[2025-06-03 23:18:24] 2025-06-03 21:17:59,636 | INFO     | chi2: 1.7009308741033418
[2025-06-03 23:18:24] 2025-06-03 21:17:59,636 | INFO     | sum of square deviations: 5449944045.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,638 | INFO     | sum of deviations: -25760461070.499996
[2025-06-03 23:18:24] 2025-06-03 21:17:59,638 | INFO     | mean x: 1748977204.5
[2025-06-03 23:18:24] 2025-06-03 21:17:59,639 | INFO     | mean y: 2370697.0115384613
[2025-06-03 23:18:24] 2025-06-03 21:17:59,639 | INFO     | -- intersect: 8269328819.462162
[2025-06-03 23:18:24] 2025-06-03 21:17:59,639 | INFO     | intersect: 8269328819.462162
[2025-06-03 23:18:24] 2025-06-03 21:17:59,639 | INFO     | chi2: 1.6997136450712227
[2025-06-03 23:18:24] 2025-06-03 21:17:59,639 | INFO     | current chi2=1.6997136450712227 (change=0.07156252206667381 %)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,640 | INFO     | right removable region: 259
[2025-06-03 23:18:24] 2025-06-03 21:17:59,640 | INFO     | sum of square deviations: 5449944045.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,642 | INFO     | sum of deviations: -65232630606.999985
[2025-06-03 23:18:24] 2025-06-03 21:17:59,642 | INFO     | mean x: 1748977509.5
[2025-06-03 23:18:24] 2025-06-03 21:17:59,642 | INFO     | mean y: 2388588.1
[2025-06-03 23:18:24] 2025-06-03 21:17:59,643 | INFO     | -- intersect: 20936622568.325073
[2025-06-03 23:18:24] 2025-06-03 21:17:59,643 | INFO     | intersect: 20936622568.325073
[2025-06-03 23:18:24] 2025-06-03 21:17:59,643 | INFO     | chi2: 0.20661503865667655
[2025-06-03 23:18:24] 2025-06-03 21:17:59,643 | INFO     | current chi2=0.20661503865667655 (change=87.85282566138409 %)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,644 | INFO     | sum of square deviations: 5141528960.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,646 | INFO     | sum of deviations: -55208371958.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,646 | INFO     | mean x: 1748977662.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,646 | INFO     | mean y: 2383617.5215686276
[2025-06-03 23:18:24] 2025-06-03 21:17:59,646 | INFO     | -- intersect: 18782441079.247738
[2025-06-03 23:18:24] 2025-06-03 21:17:59,647 | INFO     | intersect: 18782441079.247738
[2025-06-03 23:18:24] 2025-06-03 21:17:59,647 | INFO     | chi2: 0.1804504609486843
[2025-06-03 23:18:24] 2025-06-03 21:17:59,647 | INFO     | current chi2=0.1804504609486843 (change=12.663443028205132 %)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,647 | INFO     | left removable region: 20
[2025-06-03 23:18:24] 2025-06-03 21:17:59,648 | INFO     | sum of square deviations: 4233158440.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,650 | INFO     | sum of deviations: -33815499755.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,650 | INFO     | mean x: 1748977784.0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,650 | INFO     | mean y: 2373512.866108787
[2025-06-03 23:18:24] 2025-06-03 21:17:59,650 | INFO     | -- intersect: 13973633664.034096
[2025-06-03 23:18:24] 2025-06-03 21:17:59,650 | INFO     | intersect: 13973633664.034096
[2025-06-03 23:18:24] 2025-06-03 21:17:59,651 | INFO     | chi2: 0.10256826656075792
[2025-06-03 23:18:24] 2025-06-03 21:17:59,651 | INFO     | -- intersect: 13973633664.034096
[2025-06-03 23:18:24] 2025-06-03 21:17:59,651 | INFO     | current memory leak: -7.99 B/s (using 239 data points, chi2=0.10)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | ..............................
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | . Timing measurements:
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | . get job = 0 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | . initial setup = 1 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | . payload setup = 7 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,652 | INFO     | . stage-in = 0 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,653 | INFO     | . payload execution = 16166 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,653 | INFO     | . stage-out = 1 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,653 | INFO     | . log creation = 0 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,653 | INFO     | ..............................
[2025-06-03 23:18:24] 2025-06-03 21:17:59,773 | INFO     | 
[2025-06-03 23:18:24] 2025-06-03 21:17:59,773 | INFO     | job summary report
[2025-06-03 23:18:24] 2025-06-03 21:17:59,773 | INFO     | --------------------------------------------------
[2025-06-03 23:18:24] 2025-06-03 21:17:59,773 | INFO     | PanDA job id: 6668326704
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | task id: 44871837
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | errors: (none)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | pilot state: finished 
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | transexitcode: 0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | exeerrorcode: 0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,774 | INFO     | exeerrordiag: 
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | exitcode: 0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | exitmsg: OK
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | cpuconsumptiontime: 62375 s
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | nevents: 400
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | neventsw: 0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | pid: 839762
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | pgrp: 839762
[2025-06-03 23:18:24] 2025-06-03 21:17:59,775 | INFO     | corecount: 4
[2025-06-03 23:18:24] 2025-06-03 21:17:59,776 | INFO     | event service: False
[2025-06-03 23:18:24] 2025-06-03 21:17:59,776 | INFO     | sizes: {0: 2405245, 4: 2405451, 11: 2405479, 16177: 2436425, 16179: 2445388, 16180: 2445444, 16187: 2445742}
[2025-06-03 23:18:24] 2025-06-03 21:17:59,776 | INFO     | --------------------------------------------------
[2025-06-03 23:18:24] 2025-06-03 21:17:59,776 | INFO     | 
[2025-06-03 23:18:24] 2025-06-03 21:17:59,776 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-06-03 23:18:24] 2025-06-03 21:17:59,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:18:24] 2025-06-03 21:17:59,798 | INFO     | job 6668326704 has completed (purged errors)
[2025-06-03 23:18:24] 2025-06-03 21:17:59,799 | INFO     | overall cleanup function is called
[2025-06-03 23:18:24] 2025-06-03 21:18:00,806 | INFO     | --- collectZombieJob: --- 10, [839762]
[2025-06-03 23:18:24] 2025-06-03 21:18:00,807 | INFO     | zombie collector waiting for pid 839762
[2025-06-03 23:18:24] 2025-06-03 21:18:00,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:18:24] 2025-06-03 21:18:00,807 | INFO     | collected zombie processes
[2025-06-03 23:18:24] 2025-06-03 21:18:00,807 | INFO     | will attempt to kill all subprocesses of pid=839762
[2025-06-03 23:18:24] 2025-06-03 21:18:01,140 | INFO     | process IDs to be killed: [839762] (in reverse order)
[2025-06-03 23:18:24] 2025-06-03 21:18:01,223 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:18:24] 2025-06-03 21:18:01,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:18:24] 2025-06-03 21:18:01,233 | INFO     | did not find any defunct processes belonging to 839762
[2025-06-03 23:18:24] 2025-06-03 21:18:01,242 | INFO     | did not find any defunct processes belonging to 839762
[2025-06-03 23:18:24] 2025-06-03 21:18:01,242 | INFO     | ready for new job
[2025-06-03 23:18:24] 2025-06-03 21:18:01,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:18:24] 2025-06-03 21:18:01,245 | INFO     | **************************************
[2025-06-03 23:18:24] 2025-06-03 21:18:01,245 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:18:24] 2025-06-03 21:18:01,245 | INFO     | **************************************
[2025-06-03 23:18:24] 2025-06-03 21:18:01,245 | INFO     | 
[2025-06-03 23:18:24] 2025-06-03 21:18:01,248 | INFO     | architecture information:
[2025-06-03 23:18:24] 2025-06-03 21:18:01,248 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:18:24] 2025-06-03 21:18:01,260 | INFO     | cat /etc/os-release:
[2025-06-03 23:18:24] NAME="CentOS Linux"
[2025-06-03 23:18:24] VERSION="7 (Core)"
[2025-06-03 23:18:24] ID="centos"
[2025-06-03 23:18:24] ID_LIKE="rhel fedora"
[2025-06-03 23:18:24] VERSION_ID="7"
[2025-06-03 23:18:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:18:24] ANSI_COLOR="0;31"
[2025-06-03 23:18:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:18:24] HOME_URL="https://www.centos.org/"
[2025-06-03 23:18:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:18:24] 
[2025-06-03 23:18:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:18:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:18:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:18:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:18:24] 
[2025-06-03 23:18:24] 2025-06-03 21:18:01,261 | INFO     | **************************************
[2025-06-03 23:18:24] 2025-06-03 21:18:01,764 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-06-03 23:18:24] 2025-06-03 21:18:01,781 | INFO     | sufficient remaining disk space (1646145830912 B)
[2025-06-03 23:18:24] 2025-06-03 21:18:01,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:18:24] 2025-06-03 21:18:01,781 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:18:24] 2025-06-03 21:18:01,781 | INFO     | update_server=False
[2025-06-03 23:18:24] 2025-06-03 21:18:01,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:18:24] 2025-06-03 21:18:01,945 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:18:24] 2025-06-03 21:18:01,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:18:24] 2025-06-03 21:18:01,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:18:24] 2025-06-03 21:18:02,045 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 23:18:24] 2025-06-03 21:18:02,046 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 23:18:24] 2025-06-03 21:18:02,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:18:24] 2025-06-03 21:18:02,046 | INFO     | will abort loop
[2025-06-03 23:18:24] 2025-06-03 21:18:02,332 | INFO     | all job control threads have been joined
[2025-06-03 23:18:24] 2025-06-03 21:18:02,765 | INFO     | all data control threads have been joined
[2025-06-03 23:18:24] 2025-06-03 21:18:02,787 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:02,895 | INFO     | all payload control threads have been joined
[2025-06-03 23:18:24] 2025-06-03 21:18:02,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:18:24] 2025-06-03 21:18:02,944 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,049 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,338 | INFO     | [job] control thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,466 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,615 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,660 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,771 | INFO     | [data] control thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:03,900 | INFO     | [payload] control thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:04,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:18:24] 2025-06-03 21:18:04,133 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:04,177 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:04,258 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:04,279 | INFO     | [job] validate thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:04,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:18:24] 2025-06-03 21:18:04,933 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:05,788 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:08,058 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:18:24] 2025-06-03 21:18:09,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22855732815680)>', '<ExcThread(monitor, started 22855496468224)>']
[2025-06-03 23:18:24] 2025-06-03 21:18:09,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:18:24] 2025-06-03 21:18:09,984 | INFO     | [monitor] control thread has ended
[2025-06-03 23:18:24] 2025-06-03 21:18:14,660 | INFO     | all workflow threads have been joined
[2025-06-03 23:18:24] 2025-06-03 21:18:14,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:18:24] 2025-06-03 21:18:14,661 | INFO     | traces error code: 0
[2025-06-03 23:18:24] 2025-06-03 21:18:14,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:18:24] 2025-06-03 21:18:14,783 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:18:24] 2025-06-03 21:18:14,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:18:24] 2025-06-03 21:18:14,788 [wrapper] pilotpid: 832692
[2025-06-03 23:18:24] 2025-06-03 21:18:14,791 [wrapper] Pilot exit status: 0
[2025-06-03 23:18:24] 2025-06-03 21:18:14,801 [wrapper] pandaids: 6668326704
[2025-06-03 23:18:24] 2025-06-03 21:18:14,851 [wrapper] cleanup supervisor_pilot 1131416 832693
[2025-06-03 23:18:24] 2025-06-03 21:18:14,854 [wrapper] Test setup, not cleaning
[2025-06-03 23:18:24] 2025-06-03 21:18:14,856 [wrapper] apfmon messages muted
[2025-06-03 23:18:24] 2025-06-03 21:18:14,858 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:18:24] 2025-06-03 21:18:14,862 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:18:24]  *** Error codes and diagnostics ***
[2025-06-03 23:18:24]     "exeErrorCode": 0,
[2025-06-03 23:18:24]     "exeErrorDiag": "",
[2025-06-03 23:18:24]     "pilotErrorCode": 0,
[2025-06-03 23:18:24]     "pilotErrorDiag": "",
[2025-06-03 23:18:24]  *** Listing of results directory ***
[2025-06-03 23:18:24] total 637664
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc    495897 May 28 12:43 pilot3.tar.gz
[2025-06-03 23:18:24] -rwx------ 1 boinc boinc     37140 May 28 12:47 runpilot2-wrapper.sh
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc      5111 May 28 12:47 queuedata.json
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc       100 Jun  3 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:18:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 04:40 run_atlas
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc       105 Jun  3 04:40 job.xml
[2025-06-03 23:18:24] -rw------- 2 boinc boinc 213057536 Jun  3 05:14 copy_lNOtyq
[2025-06-03 23:18:24] -rw------- 2 boinc boinc  13631488 Jun  3 05:27 copy_apu46w
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc      6421 Jun  3 18:47 init_data.xml
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc 224538170 Jun  3 18:47 EVNT.44871834._003240.pool.root.1
[2025-06-03 23:18:24] drwxrwx--x 2 boinc boinc      4096 Jun  3 18:47 shared
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc    508879 Jun  3 18:47 input.tar.gz
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:47 start_atlas.sh
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc         0 Jun  3 18:47 boinc_lockfile
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc      2559 Jun  3 18:47 pandaJob.out
[2025-06-03 23:18:24] -rw------- 1 boinc boinc    983734 Jun  3 18:47 agis_schedconf.cvmfs.json
[2025-06-03 23:18:24] drwx------ 4 boinc boinc      4096 Jun  3 18:47 pilot3
[2025-06-03 23:18:24] -rw------- 1 boinc boinc 194219710 Jun  3 23:17 HITS.44871837._083013.pool.root.1
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc       529 Jun  3 23:17 boinc_task_state.xml
[2025-06-03 23:18:24] -rw------- 1 boinc boinc        95 Jun  3 23:17 pilot_heartbeat.json
[2025-06-03 23:18:24] -rw------- 1 boinc boinc      1037 Jun  3 23:17 memory_monitor_summary.json
[2025-06-03 23:18:24] -rw------- 1 boinc boinc   1603667 Jun  3 23:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:18:24] -rw------- 1 boinc boinc    351790 Jun  3 23:17 log.44871837._083013.job.log.tgz.1
[2025-06-03 23:18:24] -rw------- 1 boinc boinc      7744 Jun  3 23:17 heartbeat.json
[2025-06-03 23:18:24] -rw------- 1 boinc boinc      4550 Jun  3 23:18 pilotlog.txt
[2025-06-03 23:18:24] -rw------- 1 boinc boinc   1488070 Jun  3 23:18 log.44871837._083013.job.log.1
[2025-06-03 23:18:24] -rw------- 1 boinc boinc       357 Jun  3 23:18 output.list
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc       620 Jun  3 23:18 runtime_log
[2025-06-03 23:18:24] -rw------- 1 boinc boinc   1863680 Jun  3 23:18 result.tar.gz
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc      9026 Jun  3 23:18 runtime_log.err
[2025-06-03 23:18:24] -rw------- 1 boinc boinc       666 Jun  3 23:18 6CsNDmkUTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrLTKDmWA4AYo.diag
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc        26 Jun  3 23:18 wrapper_checkpoint.txt
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc      8192 Jun  3 23:18 boinc_mmap_file
[2025-06-03 23:18:24] -rw-r--r-- 1 boinc boinc     20893 Jun  3 23:18 stderr.txt
[2025-06-03 23:18:24] HITS file was successfully produced:
[2025-06-03 23:18:24] -rw------- 1 boinc boinc 194219710 Jun  3 23:17 shared/HITS.pool.root.1
[2025-06-03 23:18:24]  *** Contents of shared directory: ***
[2025-06-03 23:18:24] total 632668
[2025-06-03 23:18:24] -rw------- 2 boinc boinc 213057536 Jun  3 05:14 copy_lNOtyq
[2025-06-03 23:18:24] -rw------- 2 boinc boinc  13631488 Jun  3 05:27 copy_apu46w
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc 224538170 Jun  3 18:47 ATLAS.root_0
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc    508879 Jun  3 18:47 input.tar.gz
[2025-06-03 23:18:24] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:47 start_atlas.sh
[2025-06-03 23:18:24] -rw------- 1 boinc boinc 194219710 Jun  3 23:17 HITS.pool.root.1
[2025-06-03 23:18:24] -rw------- 1 boinc boinc   1863680 Jun  3 23:18 result.tar.gz
23:18:26 (829127): run_atlas exited; CPU time 63064.523253
23:18:26 (829127): called boinc_finish(0)

</stderr_txt>
]]>

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