Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:14 (3527572): wrapper (7.7.26015): starting
09:35:14 (3527572): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 09:35:14] Arguments: --nthreads 12
[2025-05-28 09:35:14] Threads: 12
[2025-05-28 09:35:14] Checking for CVMFS
[2025-05-28 09:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 09:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 09:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 09:35:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 09:35:14] 2.11.5.0 1286055 13759 224004 146525 1 477 25856040 45568000 13970 130560 0 148038204 99.828 68530171 27164 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 09:35:14] CVMFS is ok
[2025-05-28 09:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 09:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 09:35:14] Further information can be found at the LHC@home message board.
[2025-05-28 09:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 09:35:14] Checking for apptainer binary...
[2025-05-28 09:35:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 09:35:14] Running /usr/bin/apptainer --version
[2025-05-28 09:35:14] apptainer version 1.4.0-1.el9
[2025-05-28 09:35:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 09:35:14] wns0099.triumf.lcg
[2025-05-28 09:35:14] apptainer works
[2025-05-28 09:35:14] Set ATHENA_PROC_NUMBER=12
[2025-05-28 09:35:14] Set ATHENA_CORE_NUMBER=12
[2025-05-28 09:35:14] Starting ATLAS job with PandaID=6668531279
[2025-05-28 09:35:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 09:38:21]  *** The last 200 lines of the pilot log: ***
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | found no stored workdir sizes
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | WARNING  | wrong length of table data, x=[1748450150.0], y=[879.0] (must be same and length>=4)
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . Timing measurements:
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . get job = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . initial setup = 3 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload setup = 5 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-in = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload execution = 16 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-out = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . log creation = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668531279/pilotlog.txt
[2025-05-28 09:38:21] 2025-05-28 16:38:06,930 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 09:38:21] - Log from pilotlog.txt -
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | INFO     | extracted standard info from prmon json
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | found no stored workdir sizes
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | WARNING  | wrong length of table data, x=[1748450150.0], y=[879.0] (must be same and length>=4)
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . Timing measurements:
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . get job = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . initial setup = 3 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload setup = 5 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-in = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload execution = 16 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-out = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . log creation = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668531279/pilotlog.txt
[2025-05-28 09:38:21] 2025-05-28 16:38:06,930 | WARNING  | 
[2025-05-28 09:38:21] [begin log extracts]
[2025-05-28 09:38:21] - Log from pilotlog.txt -
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | INFO     | extracted standard info from prmon json
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 09:38:21] 2025-05-28 16:38:06,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | WARNING  | found no stored workdir sizes
[2025-05-28 09:38:21] 2025-05-28 16:38:06,915 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | WARNING  | wrong length of table data, x=[1748450150.0], y=[879.0] (must be same and length>=4)
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . Timing measurements:
[2025-05-28 09:38:21] 2025-05-28 16:38:06,916 | INFO     | . get job = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . initial setup = 3 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload setup = 5 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-in = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . payload execution = 16 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . stage-out = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | . log creation = 0 s
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | ..............................
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 09:38:21] 2025-05-28 16:38:06,917 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668531279/pilotlog.txt
[2025-05-28 09:38:21] [end log extracts]
[2025-05-28 09:38:21] 2025-05-28 16:38:06,931 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 09:38:21] 2025-05-28 16:38:06,931 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 09:38:21] 2025-05-28 16:38:07,291 | INFO     | 
[2025-05-28 09:38:21] 2025-05-28 16:38:07,291 | INFO     | job summary report
[2025-05-28 09:38:21] 2025-05-28 16:38:07,291 | INFO     | --------------------------------------------------
[2025-05-28 09:38:21] 2025-05-28 16:38:07,291 | INFO     | PanDA job id: 6668531279
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | task id: 44871837
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 09:35:57,963 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | pilot state: failed 
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | transexitcode: 65
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | exeerrorcode: 65
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | exitcode: 65
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | cpuconsumptiontime: 19 s
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | nevents: 0
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | neventsw: 0
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | pid: 3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:07,292 | INFO     | pgrp: 3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | corecount: 12
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | event service: False
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | sizes: {0: 2405231, 5: 2405437, 11: 2405493, 26: 2433113, 27: 2433113, 147: 2433255}
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | --------------------------------------------------
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | 
[2025-05-28 09:38:21] 2025-05-28 16:38:07,293 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 09:38:21] 2025-05-28 16:38:07,314 | INFO     | job 6668531279 has completed (purged errors)
[2025-05-28 09:38:21] 2025-05-28 16:38:07,315 | INFO     | overall cleanup function is called
[2025-05-28 09:38:21] 2025-05-28 16:38:08,322 | INFO     | --- collectZombieJob: --- 10, [3537431]
[2025-05-28 09:38:21] 2025-05-28 16:38:08,322 | INFO     | zombie collector waiting for pid 3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:08,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 09:38:21] 2025-05-28 16:38:08,322 | INFO     | collected zombie processes
[2025-05-28 09:38:21] 2025-05-28 16:38:08,322 | INFO     | will attempt to kill all subprocesses of pid=3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:08,457 | INFO     | process IDs to be killed: [3537431] (in reverse order)
[2025-05-28 09:38:21] 2025-05-28 16:38:08,526 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 09:38:21] 2025-05-28 16:38:08,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 09:38:21] 2025-05-28 16:38:08,533 | INFO     | did not find any defunct processes belonging to 3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:08,538 | INFO     | did not find any defunct processes belonging to 3537431
[2025-05-28 09:38:21] 2025-05-28 16:38:08,539 | INFO     | ready for new job
[2025-05-28 09:38:21] 2025-05-28 16:38:08,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 09:38:21] 2025-05-28 16:38:08,540 | INFO     | **************************************
[2025-05-28 09:38:21] 2025-05-28 16:38:08,540 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 09:38:21] 2025-05-28 16:38:08,540 | INFO     | **************************************
[2025-05-28 09:38:21] 2025-05-28 16:38:08,540 | INFO     | 
[2025-05-28 09:38:21] 2025-05-28 16:38:08,542 | INFO     | architecture information:
[2025-05-28 09:38:21] 2025-05-28 16:38:08,543 | INFO     | executing command: cat /etc/os-release
[2025-05-28 09:38:21] 2025-05-28 16:38:08,560 | INFO     | cat /etc/os-release:
[2025-05-28 09:38:21] NAME="CentOS Linux"
[2025-05-28 09:38:21] VERSION="7 (Core)"
[2025-05-28 09:38:21] ID="centos"
[2025-05-28 09:38:21] ID_LIKE="rhel fedora"
[2025-05-28 09:38:21] VERSION_ID="7"
[2025-05-28 09:38:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 09:38:21] ANSI_COLOR="0;31"
[2025-05-28 09:38:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 09:38:21] HOME_URL="https://www.centos.org/"
[2025-05-28 09:38:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 09:38:21] 
[2025-05-28 09:38:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 09:38:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 09:38:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 09:38:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 09:38:21] 
[2025-05-28 09:38:21] 2025-05-28 16:38:08,561 | INFO     | **************************************
[2025-05-28 09:38:21] 2025-05-28 16:38:09,063 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 09:38:21] 2025-05-28 16:38:09,082 | INFO     | sufficient remaining disk space (2041589006336 B)
[2025-05-28 09:38:21] 2025-05-28 16:38:09,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 09:38:21] 2025-05-28 16:38:09,083 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 09:38:21] 2025-05-28 16:38:09,083 | INFO     | update_server=False
[2025-05-28 09:38:21] 2025-05-28 16:38:09,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 09:38:21] 2025-05-28 16:38:09,083 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 09:38:21] 2025-05-28 16:38:09,084 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 09:38:21] 2025-05-28 16:38:09,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 09:38:21] 2025-05-28 16:38:09,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 09:38:21] 2025-05-28 16:38:09,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 09:38:21] 2025-05-28 16:38:09,084 | INFO     | aborting loop
[2025-05-28 09:38:21] 2025-05-28 16:38:09,267 | INFO     | all data control threads have been joined
[2025-05-28 09:38:21] 2025-05-28 16:38:09,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 09:38:21] 2025-05-28 16:38:10,088 | INFO     | [job] retrieve thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,090 | INFO     | [job] job monitor thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,162 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,273 | INFO     | [data] control thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,316 | INFO     | all job control threads have been joined
[2025-05-28 09:38:21] 2025-05-28 16:38:10,356 | INFO     | [payload] failed_post thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,491 | INFO     | all payload control threads have been joined
[2025-05-28 09:38:21] 2025-05-28 16:38:10,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 09:38:21] 2025-05-28 16:38:10,570 | INFO     | [payload] validate_post thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:10,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,322 | INFO     | [job] control thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,344 | INFO     | [data] copytool_out thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,392 | INFO     | [job] validate thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,496 | INFO     | [payload] control thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,508 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,516 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:11,579 | INFO     | [data] copytool_in thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:12,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 09:38:21] 2025-05-28 16:38:13,016 | INFO     | [job] queue monitor thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:14,540 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 09:38:21] 2025-05-28 16:38:16,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303488120640)>', '<ExcThread(monitor, started 140302824240896)>']
[2025-05-28 09:38:21] 2025-05-28 16:38:17,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 09:38:21] 2025-05-28 16:38:17,129 | INFO     | [monitor] control thread has ended
[2025-05-28 09:38:21] 2025-05-28 16:38:21,331 | INFO     | all workflow threads have been joined
[2025-05-28 09:38:21] 2025-05-28 16:38:21,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 09:38:21] 2025-05-28 16:38:21,331 | INFO     | traces error code: 0
[2025-05-28 09:38:21] 2025-05-28 16:38:21,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 09:38:21] 2025-05-28 16:38:21,441 [wrapper] ==== pilot stdout END ====
[2025-05-28 09:38:21] 2025-05-28 16:38:21,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 09:38:21] 2025-05-28 16:38:21,448 [wrapper] pilotpid: 3531121
[2025-05-28 09:38:21] 2025-05-28 16:38:21,450 [wrapper] Pilot exit status: 0
[2025-05-28 09:38:21] 2025-05-28 16:38:21,462 [wrapper] pandaids: 6668531279
[2025-05-28 09:38:21] 2025-05-28 16:38:21,507 [wrapper] cleanup supervisor_pilot 3531127 3531122
[2025-05-28 09:38:21] 2025-05-28 16:38:21,512 [wrapper] Test setup, not cleaning
[2025-05-28 09:38:21] 2025-05-28 16:38:21,516 [wrapper] apfmon messages muted
[2025-05-28 09:38:21] 2025-05-28 16:38:21,520 [wrapper] ==== wrapper stdout END ====
[2025-05-28 09:38:21] 2025-05-28 16:38:21,524 [wrapper] ==== wrapper stderr END ====
[2025-05-28 09:38:21]  *** Error codes and diagnostics ***
[2025-05-28 09:38:21]     "exeErrorCode": 65,
[2025-05-28 09:38:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 09:38:21]     "pilotErrorCode": 1305,
[2025-05-28 09:38:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 09:38:21]  *** Listing of results directory ***
[2025-05-28 09:38:21] total 224420
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc    495897 May 28 06:15 pilot3.tar.gz
[2025-05-28 09:38:21] -rwx------. 1 boinc boinc     37140 May 28 06:50 runpilot2-wrapper.sh
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc      5111 May 28 06:50 queuedata.json
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc       100 May 28 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 09:38:21] -rwxr-xr-x. 1 boinc boinc      7986 May 28 09:35 run_atlas
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc       105 May 28 09:35 job.xml
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc      6602 May 28 09:35 init_data.xml
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc 225774149 May 28 09:35 EVNT.44871834._003318.pool.root.1
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc     15093 May 28 09:35 start_atlas.sh
[2025-05-28 09:38:21] drwxrwx--x. 2 boinc boinc      4096 May 28 09:35 shared
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc    508878 May 28 09:35 input.tar.gz
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc         0 May 28 09:35 boinc_lockfile
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc      2559 May 28 09:35 pandaJob.out
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc    991935 May 28 09:35 agis_schedconf.cvmfs.json
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc   1603667 May 28 09:35 agis_ddmendpoints.agis.ALL.json
[2025-05-28 09:38:21] drwx------. 4 boinc boinc      4096 May 28 09:35 pilot3
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc       522 May 28 09:35 boinc_task_state.xml
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc       958 May 28 09:36 memory_monitor_summary.json
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc     20673 May 28 09:36 log.44871837._085105.job.log.tgz.1
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc        95 May 28 09:37 pilot_heartbeat.json
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc      8359 May 28 09:38 heartbeat.json
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc      8192 May 28 09:38 boinc_mmap_file
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc        22 May 28 09:38 wrapper_checkpoint.txt
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc      4475 May 28 09:38 pilotlog.txt
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc     73634 May 28 09:38 log.44871837._085105.job.log.1
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc       188 May 28 09:38 output.list
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc       620 May 28 09:38 runtime_log
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc    112640 May 28 09:38 result.tar.gz
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc       645 May 28 09:38 YmENDmmLWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKHcKDmuK9men.diag
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc      8484 May 28 09:38 runtime_log.err
[2025-05-28 09:38:21] -rw-r--r--. 1 boinc boinc     21468 May 28 09:38 stderr.txt
[2025-05-28 09:38:21] No HITS result produced
[2025-05-28 09:38:21]  *** Contents of shared directory: ***
[2025-05-28 09:38:21] total 221116
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc 225774149 May 28 09:35 ATLAS.root_0
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc     15093 May 28 09:35 start_atlas.sh
[2025-05-28 09:38:21] -rw-r--r--. 2 boinc boinc    508878 May 28 09:35 input.tar.gz
[2025-05-28 09:38:21] -rw-------. 1 boinc boinc    112640 May 28 09:38 result.tar.gz
09:38:23 (3527572): run_atlas exited; CPU time 21.735467
09:38:23 (3527572): called boinc_finish(0)

</stderr_txt>
]]>

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