Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:10:56 (3099852): wrapper (7.7.26015): starting
17:10:56 (3099852): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 17:10:56] Arguments: --nthreads 12
[2025-05-30 17:10:56] Threads: 12
[2025-05-30 17:10:56] Checking for CVMFS
[2025-05-30 17:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 17:10:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 17:10:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 17:10:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 17:10:57] 2.12.7.0 1980667 160 142380 146606 3 186 2447959 4096001 11478 130560 0 1692493 99.999 75412 3850 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-30 17:10:57] CVMFS is ok
[2025-05-30 17:10:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 17:10:57] Checking for apptainer binary...
[2025-05-30 17:10:57] apptainer is not installed, using version from CVMFS
[2025-05-30 17:10:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 17:10:57] epyc7v12
[2025-05-30 17:10:57] apptainer works
[2025-05-30 17:10:57] Set ATHENA_PROC_NUMBER=12
[2025-05-30 17:10:57] Set ATHENA_CORE_NUMBER=12
[2025-05-30 17:10:57] Starting ATLAS job with PandaID=6668051158
[2025-05-30 17:10:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 19:47:49]  *** The last 200 lines of the pilot log: ***
[2025-05-30 19:47:49] 2025-05-30 19:47:31,910 | INFO     | extracted standard info from prmon json
[2025-05-30 19:47:49] 2025-05-30 19:47:31,910 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 19:47:49] 2025-05-30 19:47:31,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 19:47:49] 2025-05-30 19:47:31,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 19:47:49] 2025-05-30 19:47:31,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 19:47:49] 2025-05-30 19:47:31,917 | INFO     | fitting pss+swap vs Time
[2025-05-30 19:47:49] 2025-05-30 19:47:31,918 | INFO     | sum of square deviations: 1110539892.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,919 | INFO     | sum of deviations: 23598934945.999996
[2025-05-30 19:47:49] 2025-05-30 19:47:31,919 | INFO     | mean x: 1748629733.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,919 | INFO     | mean y: 2603953.6732026143
[2025-05-30 19:47:49] 2025-05-30 19:47:31,919 | INFO     | -- intersect: -37155718418.15236
[2025-05-30 19:47:49] 2025-05-30 19:47:31,919 | INFO     | intersect: -37155718418.15236
[2025-05-30 19:47:49] 2025-05-30 19:47:31,920 | INFO     | chi2: 2.431982026385487
[2025-05-30 19:47:49] 2025-05-30 19:47:31,920 | INFO     | sum of square deviations: 1005179777.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,925 | INFO     | sum of deviations: 33268855544.5
[2025-05-30 19:47:49] 2025-05-30 19:47:31,925 | INFO     | mean x: 1748629580.5
[2025-05-30 19:47:49] 2025-05-30 19:47:31,925 | INFO     | mean y: 2617534.6013513515
[2025-05-30 19:47:49] 2025-05-30 19:47:31,925 | INFO     | -- intersect: -57872507140.229965
[2025-05-30 19:47:49] 2025-05-30 19:47:31,925 | INFO     | intersect: -57872507140.229965
[2025-05-30 19:47:49] 2025-05-30 19:47:31,926 | INFO     | chi2: 1.6534078700581831
[2025-05-30 19:47:49] 2025-05-30 19:47:31,926 | INFO     | current chi2=1.6534078700581831 (change=32.01397657878473 %)
[2025-05-30 19:47:49] 2025-05-30 19:47:31,926 | INFO     | sum of square deviations: 906703512.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,927 | INFO     | sum of deviations: 31908322555.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,927 | INFO     | mean x: 1748629428.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,927 | INFO     | mean y: 2615426.909090909
[2025-05-30 19:47:49] 2025-05-30 19:47:31,927 | INFO     | -- intersect: -61534404204.47528
[2025-05-30 19:47:49] 2025-05-30 19:47:31,928 | INFO     | intersect: -61534404204.47528
[2025-05-30 19:47:49] 2025-05-30 19:47:31,928 | INFO     | chi2: 1.6544739678364646
[2025-05-30 19:47:49] 2025-05-30 19:47:31,928 | INFO     | current chi2=1.6544739678364646 (change=-0.06447881358179135 %)
[2025-05-30 19:47:49] 2025-05-30 19:47:31,928 | INFO     | right removable region: 142
[2025-05-30 19:47:49] 2025-05-30 19:47:31,933 | INFO     | sum of square deviations: 1005179777.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | sum of deviations: -3692103263.000003
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | mean x: 1748629885.5
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | mean y: 2642909.810810811
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | -- intersect: 6425496068.77749
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | intersect: 6425496068.77749
[2025-05-30 19:47:49] 2025-05-30 19:47:31,934 | INFO     | chi2: 0.8084418500621463
[2025-05-30 19:47:49] 2025-05-30 19:47:31,935 | INFO     | current chi2=0.8084418500621463 (change=66.75790193796432 %)
[2025-05-30 19:47:49] 2025-05-30 19:47:31,935 | INFO     | sum of square deviations: 906703512.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | sum of deviations: -4475656497.999999
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | mean x: 1748630038.0
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | mean y: 2644119.3706293707
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | -- intersect: 8634205912.827856
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | intersect: 8634205912.827856
[2025-05-30 19:47:49] 2025-05-30 19:47:31,936 | INFO     | chi2: 0.8084993108231885
[2025-05-30 19:47:49] 2025-05-30 19:47:31,937 | INFO     | current chi2=0.8084993108231885 (change=-0.0071075935811296485 %)
[2025-05-30 19:47:49] 2025-05-30 19:47:31,937 | INFO     | left removable region: 20
[2025-05-30 19:47:49] 2025-05-30 19:47:31,937 | INFO     | sum of square deviations: 563026370.5
[2025-05-30 19:47:49] 2025-05-30 19:47:31,938 | INFO     | sum of deviations: 3735930756.500001
[2025-05-30 19:47:49] 2025-05-30 19:47:31,938 | INFO     | mean x: 1748630007.5
[2025-05-30 19:47:49] 2025-05-30 19:47:31,938 | INFO     | mean y: 2661922.368852459
[2025-05-30 19:47:49] 2025-05-30 19:47:31,938 | INFO     | -- intersect: -11600277067.782902
[2025-05-30 19:47:49] 2025-05-30 19:47:31,938 | INFO     | intersect: -11600277067.782902
[2025-05-30 19:47:49] 2025-05-30 19:47:31,939 | INFO     | chi2: 0.0003680146391220135
[2025-05-30 19:47:49] 2025-05-30 19:47:31,939 | INFO     | -- intersect: -11600277067.782902
[2025-05-30 19:47:49] 2025-05-30 19:47:31,939 | INFO     | current memory leak: 6.64 B/s (using 122 data points, chi2=0.00)
[2025-05-30 19:47:49] 2025-05-30 19:47:31,939 | INFO     | ..............................
[2025-05-30 19:47:49] 2025-05-30 19:47:31,939 | INFO     | . Timing measurements:
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . get job = 0 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . initial setup = 1 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . payload setup = 7 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . stage-in = 0 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . payload execution = 9307 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . stage-out = 2 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | . log creation = 0 s
[2025-05-30 19:47:49] 2025-05-30 19:47:31,940 | INFO     | ..............................
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | 
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | job summary report
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | --------------------------------------------------
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | PanDA job id: 6668051158
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | task id: 44871837
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | errors: (none)
[2025-05-30 19:47:49] 2025-05-30 19:47:32,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | pilot state: finished 
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | transexitcode: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | exeerrorcode: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | exeerrordiag: 
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | exitcode: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | exitmsg: OK
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | cpuconsumptiontime: 56813 s
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | nevents: 400
[2025-05-30 19:47:49] 2025-05-30 19:47:32,234 | INFO     | neventsw: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | pid: 3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | pgrp: 3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | corecount: 12
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | event service: False
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | sizes: {0: 2405029, 1: 2405284, 6: 2405490, 11: 2405518, 9319: 2433816, 9320: 2433815, 9322: 2442986, 9325: 2443042, 9369: 2443212}
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | --------------------------------------------------
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | 
[2025-05-30 19:47:49] 2025-05-30 19:47:32,235 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/6
[2025-05-30 19:47:49] 2025-05-30 19:47:32,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 19:47:49] 2025-05-30 19:47:32,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 19:47:49] 2025-05-30 19:47:32,444 | INFO     | job 6668051158 has completed (purged errors)
[2025-05-30 19:47:49] 2025-05-30 19:47:32,444 | INFO     | overall cleanup function is called
[2025-05-30 19:47:49] 2025-05-30 19:47:33,453 | INFO     | --- collectZombieJob: --- 10, [3160841]
[2025-05-30 19:47:49] 2025-05-30 19:47:33,453 | INFO     | zombie collector waiting for pid 3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:33,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 19:47:49] 2025-05-30 19:47:33,453 | INFO     | collected zombie processes
[2025-05-30 19:47:49] 2025-05-30 19:47:33,453 | INFO     | will attempt to kill all subprocesses of pid=3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:34,210 | INFO     | process IDs to be killed: [3160841] (in reverse order)
[2025-05-30 19:47:49] 2025-05-30 19:47:35,408 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 19:47:49] 2025-05-30 19:47:35,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 19:47:49] 2025-05-30 19:47:35,427 | INFO     | did not find any defunct processes belonging to 3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:35,447 | INFO     | did not find any defunct processes belonging to 3160841
[2025-05-30 19:47:49] 2025-05-30 19:47:35,448 | INFO     | ready for new job
[2025-05-30 19:47:49] 2025-05-30 19:47:35,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 19:47:49] 2025-05-30 19:47:35,450 | INFO     | **************************************
[2025-05-30 19:47:49] 2025-05-30 19:47:35,450 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 19:47:49] 2025-05-30 19:47:35,450 | INFO     | **************************************
[2025-05-30 19:47:49] 2025-05-30 19:47:35,450 | INFO     | 
[2025-05-30 19:47:49] 2025-05-30 19:47:35,480 | INFO     | architecture information:
[2025-05-30 19:47:49] 2025-05-30 19:47:35,482 | INFO     | executing command: cat /etc/os-release
[2025-05-30 19:47:49] 2025-05-30 19:47:35,541 | INFO     | cat /etc/os-release:
[2025-05-30 19:47:49] NAME="CentOS Linux"
[2025-05-30 19:47:49] VERSION="7 (Core)"
[2025-05-30 19:47:49] ID="centos"
[2025-05-30 19:47:49] ID_LIKE="rhel fedora"
[2025-05-30 19:47:49] VERSION_ID="7"
[2025-05-30 19:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 19:47:49] ANSI_COLOR="0;31"
[2025-05-30 19:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 19:47:49] HOME_URL="https://www.centos.org/"
[2025-05-30 19:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 19:47:49] 
[2025-05-30 19:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 19:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 19:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 19:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 19:47:49] 
[2025-05-30 19:47:49] 2025-05-30 19:47:35,541 | INFO     | **************************************
[2025-05-30 19:47:49] 2025-05-30 19:47:36,045 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/6
[2025-05-30 19:47:49] 2025-05-30 19:47:36,173 | INFO     | sufficient remaining disk space (334715944960 B)
[2025-05-30 19:47:49] 2025-05-30 19:47:36,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 19:47:49] 2025-05-30 19:47:36,174 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 19:47:49] 2025-05-30 19:47:36,174 | INFO     | update_server=False
[2025-05-30 19:47:49] 2025-05-30 19:47:36,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 19:47:49] 2025-05-30 19:47:36,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 19:47:49] 2025-05-30 19:47:36,205 | INFO     | all job control threads have been joined
[2025-05-30 19:47:49] 2025-05-30 19:47:36,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 19:47:49] 2025-05-30 19:47:36,348 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 19:47:49] 2025-05-30 19:47:36,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 19:47:49] 2025-05-30 19:47:36,348 | INFO     | will abort loop
[2025-05-30 19:47:49] 2025-05-30 19:47:36,385 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 19:47:49] 2025-05-30 19:47:36,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 19:47:49] 2025-05-30 19:47:36,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 19:47:49] 2025-05-30 19:47:37,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 19:47:49] 2025-05-30 19:47:37,181 | INFO     | [job] retrieve thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,209 | INFO     | [job] control thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,281 | INFO     | all data control threads have been joined
[2025-05-30 19:47:49] 2025-05-30 19:47:37,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,353 | INFO     | [job] job monitor thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,357 | INFO     | [payload] failed_post thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,365 | INFO     | [payload] validate_post thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,433 | INFO     | [data] copytool_in thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:37,525 | INFO     | all payload control threads have been joined
[2025-05-30 19:47:49] 2025-05-30 19:47:37,681 | INFO     | [job] validate thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,111 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,165 | INFO     | [job] queue monitor thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,185 | INFO     | [data] copytool_out thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,289 | INFO     | [data] control thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,393 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,531 | INFO     | [payload] control thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:38,629 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:39,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 19:47:49] 2025-05-30 19:47:43,509 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 19:47:49] 2025-05-30 19:47:44,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154306107200)>', '<ExcThread(monitor, started 140153867708160)>']
[2025-05-30 19:47:49] 2025-05-30 19:47:44,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 19:47:49] 2025-05-30 19:47:44,437 | INFO     | [monitor] control thread has ended
[2025-05-30 19:47:49] 2025-05-30 19:47:49,414 | INFO     | all workflow threads have been joined
[2025-05-30 19:47:49] 2025-05-30 19:47:49,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 19:47:49] 2025-05-30 19:47:49,415 | INFO     | traces error code: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:49,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 19:47:49] 2025-05-30 19:47:49,588 [wrapper] ==== pilot stdout END ====
[2025-05-30 19:47:49] 2025-05-30 19:47:49,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 19:47:49] 2025-05-30 19:47:49,595 [wrapper] pilotpid: 3121209
[2025-05-30 19:47:49] 2025-05-30 19:47:49,597 [wrapper] Pilot exit status: 0
[2025-05-30 19:47:49] 2025-05-30 19:47:49,625 [wrapper] pandaids: 6668051158
[2025-05-30 19:47:49] 2025-05-30 19:47:49,746 [wrapper] cleanup supervisor_pilot 3654633 3121210
[2025-05-30 19:47:49] 2025-05-30 19:47:49,752 [wrapper] Test setup, not cleaning
[2025-05-30 19:47:49] 2025-05-30 19:47:49,755 [wrapper] apfmon messages muted
[2025-05-30 19:47:49] 2025-05-30 19:47:49,759 [wrapper] ==== wrapper stdout END ====
[2025-05-30 19:47:49] 2025-05-30 19:47:49,762 [wrapper] ==== wrapper stderr END ====
[2025-05-30 19:47:49]  *** Error codes and diagnostics ***
[2025-05-30 19:47:49]     "exeErrorCode": 0,
[2025-05-30 19:47:49]     "exeErrorDiag": "",
[2025-05-30 19:47:49]     "pilotErrorCode": 0,
[2025-05-30 19:47:49]     "pilotErrorDiag": "",
[2025-05-30 19:47:49]  *** Listing of results directory ***
[2025-05-30 19:47:49] total 418212
[2025-05-30 19:47:49] -rw-r--r-- 1 boinc boinc    495897 May 28 04:31 pilot3.tar.gz
[2025-05-30 19:47:49] -rw-r--r-- 1 boinc boinc      5111 May 28 05:25 queuedata.json
[2025-05-30 19:47:49] -rwx------ 1 boinc boinc     37140 May 28 05:29 runpilot2-wrapper.sh
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc       100 May 30 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 19:47:49] -rwxr-xr-x 1 boinc boinc      7986 May 30 17:10 run_atlas
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc       105 May 30 17:10 job.xml
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc     15093 May 30 17:10 start_atlas.sh
[2025-05-30 19:47:49] drwxrwx--x 2 boinc boinc      4096 May 30 17:10 shared
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc    508881 May 30 17:10 input.tar.gz
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc      6929 May 30 17:10 init_data.xml
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc 226247542 May 30 17:10 EVNT.44871834._003099.pool.root.1
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc         0 May 30 17:10 boinc_lockfile
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc      2558 May 30 17:10 pandaJob.out
[2025-05-30 19:47:49] -rw------- 1 boinc boinc    987377 May 30 17:11 agis_schedconf.cvmfs.json
[2025-05-30 19:47:49] -rw------- 1 boinc boinc   1603667 May 30 17:11 agis_ddmendpoints.agis.ALL.json
[2025-05-30 19:47:49] drwx------ 4 boinc boinc      4096 May 30 17:11 pilot3
[2025-05-30 19:47:49] -rw------- 1 boinc boinc 195696965 May 30 19:45 HITS.44871837._079289.pool.root.1
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc       530 May 30 19:45 boinc_task_state.xml
[2025-05-30 19:47:49] -rw------- 1 boinc boinc      1022 May 30 19:46 memory_monitor_summary.json
[2025-05-30 19:47:49] -rw------- 1 boinc boinc    403422 May 30 19:46 log.44871837._079289.job.log.tgz.1
[2025-05-30 19:47:49] -rw------- 1 boinc boinc        95 May 30 19:47 pilot_heartbeat.json
[2025-05-30 19:47:49] -rw------- 1 boinc boinc      7646 May 30 19:47 heartbeat.json
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc      8192 May 30 19:47 boinc_mmap_file
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc        27 May 30 19:47 wrapper_checkpoint.txt
[2025-05-30 19:47:49] -rw------- 1 boinc boinc      4563 May 30 19:47 pilotlog.txt
[2025-05-30 19:47:49] -rw------- 1 boinc boinc    831233 May 30 19:47 log.44871837._079289.job.log.1
[2025-05-30 19:47:49] -rw------- 1 boinc boinc       357 May 30 19:47 output.list
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc       620 May 30 19:47 runtime_log
[2025-05-30 19:47:49] -rw------- 1 boinc boinc   1249280 May 30 19:47 result.tar.gz
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc      8963 May 30 19:47 runtime_log.err
[2025-05-30 19:47:49] -rw------- 1 boinc boinc       653 May 30 19:47 VP9KDmfXOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1ySKDmIEBFvn.diag
[2025-05-30 19:47:49] -rw-rw-r-- 1 boinc boinc     20582 May 30 19:47 stderr.txt
[2025-05-30 19:47:49] HITS file was successfully produced:
[2025-05-30 19:47:49] -rw------- 1 boinc boinc 195696965 May 30 19:45 shared/HITS.pool.root.1
[2025-05-30 19:47:49]  *** Contents of shared directory: ***
[2025-05-30 19:47:49] total 413804
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc     15093 May 30 17:10 start_atlas.sh
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc    508881 May 30 17:10 input.tar.gz
[2025-05-30 19:47:49] -rw-r--r-- 2 boinc boinc 226247542 May 30 17:10 ATLAS.root_0
[2025-05-30 19:47:49] -rw------- 1 boinc boinc 195696965 May 30 19:45 HITS.pool.root.1
[2025-05-30 19:47:49] -rw------- 1 boinc boinc   1249280 May 30 19:47 result.tar.gz
19:47:51 (3099852): run_atlas exited; CPU time 57303.461342
19:47:51 (3099852): called boinc_finish(0)

</stderr_txt>
]]>

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