Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:14 (1441906): wrapper (7.7.26015): starting
11:38:14 (1441906): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 11:38:14] Arguments: --nthreads 8
[2025-05-28 11:38:14] Threads: 8
[2025-05-28 11:38:14] Checking for CVMFS
[2025-05-28 11:38:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 11:38:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 11:38:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 11:38:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 11:38:16] 2.12.6.0 8572 27419 299920 146524 0 735 27118077 32935937 32003 16776704 0 315163062 99.606 326265197 22762 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 11:38:16] CVMFS is ok
[2025-05-28 11:38:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 11:38:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 11:38:16] Further information can be found at the LHC@home message board.
[2025-05-28 11:38:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 11:38:16] Checking for apptainer binary...
[2025-05-28 11:38:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 11:38:16] Running /usr/bin/apptainer --version
[2025-05-28 11:38:16] apptainer version 1.4.1-1.el9
[2025-05-28 11:38:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 11:38:16] c7-2-38.aglt2.org
[2025-05-28 11:38:16] apptainer works
[2025-05-28 11:38:16] Set ATHENA_PROC_NUMBER=8
[2025-05-28 11:38:16] Set ATHENA_CORE_NUMBER=8
[2025-05-28 11:38:16] Starting ATLAS job with PandaID=6668313505
[2025-05-28 11:38:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 14:28:15]  *** The last 200 lines of the pilot log: ***
[2025-05-28 14:28:15] 2025-05-28 18:27:57,282 | INFO     | extracted standard info from prmon json
[2025-05-28 14:28:15] 2025-05-28 18:27:57,282 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 14:28:15] 2025-05-28 18:27:57,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 14:28:15] 2025-05-28 18:27:57,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 14:28:15] 2025-05-28 18:27:57,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 14:28:15] 2025-05-28 18:27:57,293 | INFO     | fitting pss+swap vs Time
[2025-05-28 14:28:15] 2025-05-28 18:27:57,293 | INFO     | sum of square deviations: 1342820944.6993902
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | sum of deviations: 29851346103.398834
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | mean x: 1748451847.0429447
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | mean y: 2094224.0858895706
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | -- intersect: -38866558694.40891
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | intersect: -38866558694.40891
[2025-05-28 14:28:15] 2025-05-28 18:27:57,294 | INFO     | chi2: 4.621773658259131
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | sum of square deviations: 1222997577.189868
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | sum of deviations: 50485965762.392395
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | mean x: 1748451694.544304
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | mean y: 2120106.158227848
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | -- intersect: -72174860481.80624
[2025-05-28 14:28:15] 2025-05-28 18:27:57,295 | INFO     | intersect: -72174860481.80624
[2025-05-28 14:28:15] 2025-05-28 18:27:57,296 | INFO     | chi2: 3.069291820390221
[2025-05-28 14:28:15] 2025-05-28 18:27:57,296 | INFO     | current chi2=3.069291820390221 (change=33.590607257337616 %)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,296 | INFO     | sum of square deviations: 1110523184.6797373
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | sum of deviations: 49305056739.07188
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | mean x: 1748451542.0457516
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | mean y: 2118492.418300654
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | -- intersect: -77625709251.62361
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | intersect: -77625709251.62361
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | chi2: 3.063412653534038
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | current chi2=3.063412653534038 (change=0.19154799218261945 %)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | right removable region: 152
[2025-05-28 14:28:15] 2025-05-28 18:27:57,297 | INFO     | sum of square deviations: 1222993307.189868
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | sum of deviations: -5255775108.873417
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | mean x: 1748451999.544304
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | mean y: 2138682.1962025315
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | -- intersect: 7516055924.621679
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | intersect: 7516055924.621679
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | chi2: 2.05516615044769
[2025-05-28 14:28:15] 2025-05-28 18:27:57,298 | INFO     | current chi2=2.05516615044769 (change=55.53295547532713 %)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | sum of square deviations: 1110514644.6797373
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | sum of deviations: -17093752792.679743
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | mean x: 1748452152.0457516
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | mean y: 2154667.954248366
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | -- intersect: 26915450228.78703
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | intersect: 26915450228.78703
[2025-05-28 14:28:15] 2025-05-28 18:27:57,299 | INFO     | chi2: 1.7370922962156694
[2025-05-28 14:28:15] 2025-05-28 18:27:57,300 | INFO     | current chi2=1.7370922962156694 (change=15.47679510791537 %)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,300 | INFO     | left removable region: 20
[2025-05-28 14:28:15] 2025-05-28 18:27:57,300 | INFO     | sum of square deviations: 713124104.7272751
[2025-05-28 14:28:15] 2025-05-28 18:27:57,300 | INFO     | sum of deviations: 2672592201.8181815
[2025-05-28 14:28:15] 2025-05-28 18:27:57,300 | INFO     | mean x: 1748452121.5454545
[2025-05-28 14:28:15] 2025-05-28 18:27:57,301 | INFO     | mean y: 2187168.5303030303
[2025-05-28 14:28:15] 2025-05-28 18:27:57,301 | INFO     | -- intersect: -6550528514.922755
[2025-05-28 14:28:15] 2025-05-28 18:27:57,301 | INFO     | intersect: -6550528514.922755
[2025-05-28 14:28:15] 2025-05-28 18:27:57,301 | INFO     | chi2: 0.09064480256909795
[2025-05-28 14:28:15] 2025-05-28 18:27:57,302 | INFO     | -- intersect: -6550528514.922755
[2025-05-28 14:28:15] 2025-05-28 18:27:57,302 | INFO     | current memory leak: 3.75 B/s (using 132 data points, chi2=0.09)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,302 | INFO     | ..............................
[2025-05-28 14:28:15] 2025-05-28 18:27:57,302 | INFO     | . Timing measurements:
[2025-05-28 14:28:15] 2025-05-28 18:27:57,302 | INFO     | . get job = 0 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . initial setup = 6 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . payload setup = 51 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . stage-in = 0 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . payload execution = 9952 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . stage-out = 1 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | . log creation = 0 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,303 | INFO     | ..............................
[2025-05-28 14:28:15] 2025-05-28 18:27:57,420 | INFO     | 
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | job summary report
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | --------------------------------------------------
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | PanDA job id: 6668313505
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | task id: 44871837
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | errors: (none)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | pilot state: finished 
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | transexitcode: 0
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | exeerrorcode: 0
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | exeerrordiag: 
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | exitcode: 0
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | exitmsg: OK
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | cpuconsumptiontime: 38979 s
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | nevents: 400
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | neventsw: 0
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | pid: 1548147
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | pgrp: 1548147
[2025-05-28 14:28:15] 2025-05-28 18:27:57,421 | INFO     | corecount: 8
[2025-05-28 14:28:15] 2025-05-28 18:27:57,422 | INFO     | event service: False
[2025-05-28 14:28:15] 2025-05-28 18:27:57,422 | INFO     | sizes: {0: 2404405, 1: 2405090, 2: 2405289, 13: 2405289, 24: 2405345, 33: 2405579, 35: 2405763, 10008: 2434110, 10009: 2434109, 10011: 2443106, 10014: 2443162, 100
[2025-05-28 14:28:15] 2025-05-28 18:27:57,422 | INFO     | --------------------------------------------------
[2025-05-28 14:28:15] 2025-05-28 18:27:57,422 | INFO     | 
[2025-05-28 14:28:15] 2025-05-28 18:27:57,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 14:28:15] 2025-05-28 18:27:57,562 | INFO     | job 6668313505 has completed (purged errors)
[2025-05-28 14:28:15] 2025-05-28 18:27:57,562 | INFO     | overall cleanup function is called
[2025-05-28 14:28:15] 2025-05-28 18:27:58,572 | INFO     | --- collectZombieJob: --- 10, [1548147]
[2025-05-28 14:28:15] 2025-05-28 18:27:58,572 | INFO     | zombie collector waiting for pid 1548147
[2025-05-28 14:28:15] 2025-05-28 18:27:58,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 14:28:15] 2025-05-28 18:27:58,572 | INFO     | collected zombie processes
[2025-05-28 14:28:15] 2025-05-28 18:27:58,572 | INFO     | will attempt to kill all subprocesses of pid=1548147
[2025-05-28 14:28:15] 2025-05-28 18:27:59,942 | INFO     | process IDs to be killed: [1548147] (in reverse order)
[2025-05-28 14:28:15] 2025-05-28 18:28:00,254 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 14:28:15] 2025-05-28 18:28:00,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 14:28:15] 2025-05-28 18:28:00,445 | INFO     | did not find any defunct processes belonging to 1548147
[2025-05-28 14:28:15] 2025-05-28 18:28:00,604 | INFO     | did not find any defunct processes belonging to 1548147
[2025-05-28 14:28:15] 2025-05-28 18:28:00,604 | INFO     | ready for new job
[2025-05-28 14:28:15] 2025-05-28 18:28:00,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 14:28:15] 2025-05-28 18:28:00,606 | INFO     | **************************************
[2025-05-28 14:28:15] 2025-05-28 18:28:00,609 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 14:28:15] 2025-05-28 18:28:00,609 | INFO     | **************************************
[2025-05-28 14:28:15] 2025-05-28 18:28:00,609 | INFO     | 
[2025-05-28 14:28:15] 2025-05-28 18:28:00,622 | INFO     | architecture information:
[2025-05-28 14:28:15] 2025-05-28 18:28:00,626 | INFO     | executing command: cat /etc/os-release
[2025-05-28 14:28:15] 2025-05-28 18:28:00,695 | INFO     | cat /etc/os-release:
[2025-05-28 14:28:15] NAME="CentOS Linux"
[2025-05-28 14:28:15] VERSION="7 (Core)"
[2025-05-28 14:28:15] ID="centos"
[2025-05-28 14:28:15] ID_LIKE="rhel fedora"
[2025-05-28 14:28:15] VERSION_ID="7"
[2025-05-28 14:28:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 14:28:15] ANSI_COLOR="0;31"
[2025-05-28 14:28:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 14:28:15] HOME_URL="https://www.centos.org/"
[2025-05-28 14:28:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 14:28:15] 
[2025-05-28 14:28:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 14:28:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 14:28:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 14:28:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 14:28:15] 
[2025-05-28 14:28:15] 2025-05-28 18:28:00,695 | INFO     | **************************************
[2025-05-28 14:28:15] 2025-05-28 18:28:01,199 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-28 14:28:15] 2025-05-28 18:28:01,245 | INFO     | sufficient remaining disk space (73819750400 B)
[2025-05-28 14:28:15] 2025-05-28 18:28:01,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 14:28:15] 2025-05-28 18:28:01,249 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 14:28:15] 2025-05-28 18:28:01,249 | INFO     | update_server=False
[2025-05-28 14:28:15] 2025-05-28 18:28:01,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 14:28:15] 2025-05-28 18:28:01,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 14:28:15] 2025-05-28 18:28:01,592 | INFO     | all data control threads have been joined
[2025-05-28 14:28:15] 2025-05-28 18:28:01,737 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 14:28:15] 2025-05-28 18:28:01,737 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 14:28:15] 2025-05-28 18:28:01,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:28:15] 2025-05-28 18:28:01,740 | INFO     | will abort loop
[2025-05-28 14:28:15] 2025-05-28 18:28:01,762 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 14:28:15] 2025-05-28 18:28:01,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 14:28:15] 2025-05-28 18:28:01,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 14:28:15] 2025-05-28 18:28:02,203 | INFO     | all payload control threads have been joined
[2025-05-28 14:28:15] 2025-05-28 18:28:02,258 | INFO     | [job] retrieve thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,410 | INFO     | [data] copytool_in thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,411 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 14:28:15] 2025-05-28 18:28:02,595 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,597 | INFO     | [data] control thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,745 | INFO     | [job] job monitor thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,868 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,868 | INFO     | [job] validate thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:02,896 | INFO     | all job control threads have been joined
[2025-05-28 14:28:15] 2025-05-28 18:28:03,209 | INFO     | [payload] control thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,274 | INFO     | [data] copytool_out thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,358 | INFO     | [payload] failed_post thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,467 | INFO     | [job] queue monitor thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,757 | INFO     | [payload] validate_post thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:03,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 14:28:15] 2025-05-28 18:28:03,902 | INFO     | [job] control thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:07,791 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 14:28:15] 2025-05-28 18:28:08,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221814339392)>', '<ExcThread(monitor, started 140220951426816)>']
[2025-05-28 14:28:15] 2025-05-28 18:28:09,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 14:28:15] 2025-05-28 18:28:09,820 | INFO     | [monitor] control thread has ended
[2025-05-28 14:28:15] 2025-05-28 18:28:13,901 | INFO     | all workflow threads have been joined
[2025-05-28 14:28:15] 2025-05-28 18:28:13,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 14:28:15] 2025-05-28 18:28:13,901 | INFO     | traces error code: 0
[2025-05-28 14:28:15] 2025-05-28 18:28:13,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 14:28:15] 2025-05-28 18:28:14,398 [wrapper] ==== pilot stdout END ====
[2025-05-28 14:28:15] 2025-05-28 18:28:14,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 14:28:15] 2025-05-28 18:28:14,447 [wrapper] pilotpid: 1490068
[2025-05-28 14:28:15] 2025-05-28 18:28:14,504 [wrapper] Pilot exit status: 0
[2025-05-28 14:28:15] 2025-05-28 18:28:14,684 [wrapper] pandaids: 6668313505
[2025-05-28 14:28:15] 2025-05-28 18:28:15,013 [wrapper] cleanup supervisor_pilot 3382927 1490069
[2025-05-28 14:28:15] 2025-05-28 18:28:15,080 [wrapper] Test setup, not cleaning
[2025-05-28 14:28:15] 2025-05-28 18:28:15,122 [wrapper] apfmon messages muted
[2025-05-28 14:28:15] 2025-05-28 18:28:15,153 [wrapper] ==== wrapper stdout END ====
[2025-05-28 14:28:15] 2025-05-28 18:28:15,196 [wrapper] ==== wrapper stderr END ====
[2025-05-28 14:28:15]  *** Error codes and diagnostics ***
[2025-05-28 14:28:15]     "exeErrorCode": 0,
[2025-05-28 14:28:15]     "exeErrorDiag": "",
[2025-05-28 14:28:15]     "pilotErrorCode": 0,
[2025-05-28 14:28:15]     "pilotErrorDiag": "",
[2025-05-28 14:28:15]  *** Listing of results directory ***
[2025-05-28 14:28:15] total 417664
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas    495897 May 28 05:38 pilot3.tar.gz
[2025-05-28 14:28:15] -rwx------. 1 boincer umatlas     37140 May 28 05:45 runpilot2-wrapper.sh
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas      5111 May 28 05:45 queuedata.json
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas       100 May 28 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 14:28:15] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 11:38 run_atlas
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas       105 May 28 11:38 job.xml
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas 222034226 May 28 11:38 EVNT.44871834._003213.pool.root.1
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas      6925 May 28 11:38 init_data.xml
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 11:38 start_atlas.sh
[2025-05-28 14:28:15] drwxrwx--x. 2 boincer umatlas      4096 May 28 11:38 shared
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas    508870 May 28 11:38 input.tar.gz
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas         0 May 28 11:38 boinc_lockfile
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas      2558 May 28 11:38 pandaJob.out
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas    991935 May 28 11:39 agis_schedconf.cvmfs.json
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas   1603667 May 28 11:39 agis_ddmendpoints.agis.ALL.json
[2025-05-28 14:28:15] drwx------. 4 boincer umatlas      4096 May 28 11:39 pilot3
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas 199364864 May 28 14:25 HITS.44871837._082327.pool.root.1
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas       529 May 28 14:25 boinc_task_state.xml
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas      1045 May 28 14:27 memory_monitor_summary.json
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas    361296 May 28 14:27 log.44871837._082327.job.log.tgz.1
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas        95 May 28 14:27 pilot_heartbeat.json
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas      7703 May 28 14:27 heartbeat.json
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas      8192 May 28 14:28 boinc_mmap_file
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas        27 May 28 14:28 wrapper_checkpoint.txt
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas      4539 May 28 14:28 pilotlog.txt
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas    859119 May 28 14:28 log.44871837._082327.job.log.1
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas       357 May 28 14:28 output.list
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas       620 May 28 14:28 runtime_log
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas   1239040 May 28 14:28 result.tar.gz
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas      8655 May 28 14:28 runtime_log.err
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas       657 May 28 14:28 3ZzMDmLXSe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhHTKDm9mndGo.diag
[2025-05-28 14:28:15] -rw-r--r--. 1 boincer umatlas     20907 May 28 14:28 stderr.txt
[2025-05-28 14:28:15] HITS file was successfully produced:
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas 199364864 May 28 14:25 shared/HITS.pool.root.1
[2025-05-28 14:28:15]  *** Contents of shared directory: ***
[2025-05-28 14:28:15] total 413264
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas 222034226 May 28 11:38 ATLAS.root_0
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas     15093 May 28 11:38 start_atlas.sh
[2025-05-28 14:28:15] -rw-r--r--. 2 boincer umatlas    508870 May 28 11:38 input.tar.gz
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas 199364864 May 28 14:25 HITS.pool.root.1
[2025-05-28 14:28:15] -rw-------. 1 boincer umatlas   1239040 May 28 14:28 result.tar.gz
14:28:17 (1441906): run_atlas exited; CPU time 39518.349452
14:28:17 (1441906): called boinc_finish(0)

</stderr_txt>
]]>

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