Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:18 (1095728): wrapper (7.7.26015): starting
06:43:18 (1095728): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 06:43:18] Arguments: --nthreads 4
[2025-06-04 06:43:18] Threads: 4
[2025-06-04 06:43:18] Checking for CVMFS
[2025-06-04 06:43:18] No cvmfs_config command found, will try listing directly
[2025-06-04 06:43:18] CVMFS is ok
[2025-06-04 06:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:43:18] Further information can be found at the LHC@home message board.
[2025-06-04 06:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:43:18] Checking for apptainer binary...
[2025-06-04 06:43:18] which: no apptainer in ((null))
[2025-06-04 06:43:18] apptainer is not installed, using version from CVMFS
[2025-06-04 06:43:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:43:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-04 06:43:19] apptainer works
[2025-06-04 06:43:19] Set ATHENA_PROC_NUMBER=4
[2025-06-04 06:43:19] Set ATHENA_CORE_NUMBER=4
[2025-06-04 06:43:19] Starting ATLAS job with PandaID=6668233331
[2025-06-04 06:43:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:02:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:02:35] 2025-06-04 08:02:13,405 | INFO     | chi2: 0.0015465418024239283
[2025-06-04 10:02:35] 2025-06-04 08:02:13,405 | INFO     | current chi2=0.0015465418024239283 (change=37.55717338410275 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,405 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,406 | INFO     | sum of deviations: 2308295571.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,406 | INFO     | mean x: 1749018774.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,407 | INFO     | mean y: 2322980.422857143
[2025-06-04 10:02:35] 2025-06-04 08:02:13,407 | INFO     | -- intersect: -2427124420.4956717
[2025-06-04 10:02:35] 2025-06-04 08:02:13,407 | INFO     | intersect: -2427124420.4956717
[2025-06-04 10:02:35] 2025-06-04 08:02:13,407 | INFO     | chi2: 0.0008261117253655009
[2025-06-04 10:02:35] 2025-06-04 08:02:13,407 | INFO     | current chi2=0.0008261117253655009 (change=46.58329156892377 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,408 | INFO     | sum of square deviations: 1523386702.5
[2025-06-04 10:02:35] 2025-06-04 08:02:13,411 | INFO     | sum of deviations: 1681888309.5
[2025-06-04 10:02:35] 2025-06-04 08:02:13,411 | INFO     | mean x: 1749018926.5
[2025-06-04 10:02:35] 2025-06-04 08:02:13,411 | INFO     | mean y: 2323669.5
[2025-06-04 10:02:35] 2025-06-04 08:02:13,411 | INFO     | -- intersect: -1928672892.7957706
[2025-06-04 10:02:35] 2025-06-04 08:02:13,411 | INFO     | intersect: -1928672892.7957706
[2025-06-04 10:02:35] 2025-06-04 08:02:13,412 | INFO     | chi2: 0.0005427019023093029
[2025-06-04 10:02:35] 2025-06-04 08:02:13,412 | INFO     | current chi2=0.0005427019023093029 (change=34.30647627363084 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,412 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,413 | INFO     | sum of deviations: 1223513966.0000002
[2025-06-04 10:02:35] 2025-06-04 08:02:13,413 | INFO     | mean x: 1749019079.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,413 | INFO     | mean y: 2324204.672727273
[2025-06-04 10:02:35] 2025-06-04 08:02:13,413 | INFO     | -- intersect: -1534022289.5035288
[2025-06-04 10:02:35] 2025-06-04 08:02:13,413 | INFO     | intersect: -1534022289.5035288
[2025-06-04 10:02:35] 2025-06-04 08:02:13,414 | INFO     | chi2: 0.00038732334286655434
[2025-06-04 10:02:35] 2025-06-04 08:02:13,414 | INFO     | current chi2=0.00038732334286655434 (change=28.63055367625991 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,414 | INFO     | sum of square deviations: 1270051720.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | sum of deviations: 827332447.0000001
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | mean x: 1749019231.5
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | mean y: 2324695.7375
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | -- intersect: -1137015016.0712087
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | intersect: -1137015016.0712087
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | chi2: 0.00023965137986388542
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | current chi2=0.00023965137986388542 (change=38.12627504187032 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,416 | INFO     | sum of square deviations: 1154663510.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,417 | INFO     | sum of deviations: 587480447.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,417 | INFO     | mean x: 1749019384.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,417 | INFO     | mean y: 2325012.8645161293
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | -- intersect: -887557347.3427312
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | intersect: -887557347.3427312
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | chi2: 0.00019152315293939558
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | current chi2=0.00019152315293939558 (change=20.082599545984333 %)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | left removable region: 80
[2025-06-04 10:02:35] 2025-06-04 08:02:13,418 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | sum of deviations: 383923020.00000024
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | mean x: 1749020421.0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | mean y: 2324788.651376147
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | -- intersect: -1669988615.5209267
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | intersect: -1669988615.5209267
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | chi2: 3.7225594454084045e-05
[2025-06-04 10:02:35] 2025-06-04 08:02:13,419 | INFO     | -- intersect: -1669988615.5209267
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | current memory leak: 0.96 B/s (using 109 data points, chi2=0.00)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | ..............................
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | . Timing measurements:
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | . get job = 0 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | . initial setup = 1 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | . payload setup = 9 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,420 | INFO     | . stage-in = 0 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,421 | INFO     | . payload execution = 11880 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,421 | INFO     | . stage-out = 1 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,421 | INFO     | . log creation = 0 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,421 | INFO     | ..............................
[2025-06-04 10:02:35] 2025-06-04 08:02:13,854 | INFO     | 
[2025-06-04 10:02:35] 2025-06-04 08:02:13,854 | INFO     | job summary report
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | --------------------------------------------------
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | PanDA job id: 6668233331
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | task id: 44871837
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | errors: (none)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | pilot state: finished 
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | transexitcode: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | exeerrorcode: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | exeerrordiag: 
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | exitcode: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,855 | INFO     | exitmsg: OK
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | cpuconsumptiontime: 45278 s
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | nevents: 400
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | neventsw: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | pid: 1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | pgrp: 1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | corecount: 4
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | event service: False
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | sizes: {0: 2405018, 1: 2405273, 7: 2405479, 12: 2405507, 11893: 2435260, 11895: 2444225, 11896: 2444409, 11904: 2444579}
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | --------------------------------------------------
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | 
[2025-06-04 10:02:35] 2025-06-04 08:02:13,856 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:02:35] 2025-06-04 08:02:13,885 | INFO     | job 6668233331 has completed (purged errors)
[2025-06-04 10:02:35] 2025-06-04 08:02:13,885 | INFO     | overall cleanup function is called
[2025-06-04 10:02:35] 2025-06-04 08:02:14,893 | INFO     | --- collectZombieJob: --- 10, [1107290]
[2025-06-04 10:02:35] 2025-06-04 08:02:14,893 | INFO     | zombie collector waiting for pid 1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:14,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:02:35] 2025-06-04 08:02:14,893 | INFO     | collected zombie processes
[2025-06-04 10:02:35] 2025-06-04 08:02:14,894 | INFO     | will attempt to kill all subprocesses of pid=1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:16,827 | INFO     | process IDs to be killed: [1107290] (in reverse order)
[2025-06-04 10:02:35] 2025-06-04 08:02:16,922 | INFO     | PID=1099697 has CPU usage=19.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:02:35] 2025-06-04 08:02:16,923 | INFO     | .. there are 14 such processes running
[2025-06-04 10:02:35] 2025-06-04 08:02:17,077 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:02:35] 2025-06-04 08:02:17,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:02:35] 2025-06-04 08:02:17,103 | INFO     | did not find any defunct processes belonging to 1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:17,126 | INFO     | did not find any defunct processes belonging to 1107290
[2025-06-04 10:02:35] 2025-06-04 08:02:17,127 | INFO     | ready for new job
[2025-06-04 10:02:35] 2025-06-04 08:02:17,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:02:35] 2025-06-04 08:02:17,129 | INFO     | **************************************
[2025-06-04 10:02:35] 2025-06-04 08:02:17,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:02:35] 2025-06-04 08:02:17,129 | INFO     | **************************************
[2025-06-04 10:02:35] 2025-06-04 08:02:17,129 | INFO     | 
[2025-06-04 10:02:35] 2025-06-04 08:02:17,137 | INFO     | architecture information:
[2025-06-04 10:02:35] 2025-06-04 08:02:17,137 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:02:35] 2025-06-04 08:02:17,158 | INFO     | cat /etc/os-release:
[2025-06-04 10:02:35] NAME="CentOS Linux"
[2025-06-04 10:02:35] VERSION="7 (Core)"
[2025-06-04 10:02:35] ID="centos"
[2025-06-04 10:02:35] ID_LIKE="rhel fedora"
[2025-06-04 10:02:35] VERSION_ID="7"
[2025-06-04 10:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:02:35] ANSI_COLOR="0;31"
[2025-06-04 10:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:02:35] HOME_URL="https://www.centos.org/"
[2025-06-04 10:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:02:35] 
[2025-06-04 10:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:02:35] 
[2025-06-04 10:02:35] 2025-06-04 08:02:17,159 | INFO     | **************************************
[2025-06-04 10:02:35] 2025-06-04 08:02:17,661 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-04 10:02:35] 2025-06-04 08:02:17,688 | INFO     | sufficient remaining disk space (3252202504192 B)
[2025-06-04 10:02:35] 2025-06-04 08:02:17,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:02:35] 2025-06-04 08:02:17,689 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:02:35] 2025-06-04 08:02:17,689 | INFO     | update_server=False
[2025-06-04 10:02:35] 2025-06-04 08:02:17,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:02:35] 2025-06-04 08:02:17,690 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:02:35] 2025-06-04 08:02:17,691 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:02:35] 2025-06-04 08:02:17,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:02:35] 2025-06-04 08:02:17,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:02:35] 2025-06-04 08:02:17,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:02:35] 2025-06-04 08:02:18,097 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:02:35] 2025-06-04 08:02:18,098 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:02:35] 2025-06-04 08:02:18,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:02:35] 2025-06-04 08:02:18,098 | INFO     | will abort loop
[2025-06-04 10:02:35] 2025-06-04 08:02:18,185 | INFO     | all data control threads have been joined
[2025-06-04 10:02:35] 2025-06-04 08:02:18,309 | INFO     | all job control threads have been joined
[2025-06-04 10:02:35] 2025-06-04 08:02:18,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:02:35] 2025-06-04 08:02:18,695 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:18,719 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:18,902 | INFO     | all payload control threads have been joined
[2025-06-04 10:02:35] 2025-06-04 08:02:19,018 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,103 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,190 | INFO     | [data] control thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,314 | INFO     | [job] control thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,325 | INFO     | [job] validate thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,540 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,680 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,907 | INFO     | [payload] control thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:19,909 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:20,064 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:20,166 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:20,167 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:20,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:02:35] 2025-06-04 08:02:24,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:28,305 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:02:35] 2025-06-04 08:02:29,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:02:35] 2025-06-04 08:02:29,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22368475322176)>', '<ExcThread(monitor, started 22368235779840)>']
[2025-06-04 10:02:35] 2025-06-04 08:02:30,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:02:35] 2025-06-04 08:02:30,756 | INFO     | [monitor] control thread has ended
[2025-06-04 10:02:35] 2025-06-04 08:02:35,017 | INFO     | all workflow threads have been joined
[2025-06-04 10:02:35] 2025-06-04 08:02:35,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:02:35] 2025-06-04 08:02:35,018 | INFO     | traces error code: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:35,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:02:35] 2025-06-04 08:02:35,237 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:02:35] 2025-06-04 08:02:35,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:02:35] 2025-06-04 08:02:35,245 [wrapper] pilotpid: 1099697
[2025-06-04 10:02:35] 2025-06-04 08:02:35,248 [wrapper] Pilot exit status: 0
[2025-06-04 10:02:35] 2025-06-04 08:02:35,264 [wrapper] pandaids: 6668233331
[2025-06-04 10:02:35] 2025-06-04 08:02:35,434 [wrapper] cleanup supervisor_pilot 1715652 1099698
[2025-06-04 10:02:35] 2025-06-04 08:02:35,439 [wrapper] Test setup, not cleaning
[2025-06-04 10:02:35] 2025-06-04 08:02:35,442 [wrapper] apfmon messages muted
[2025-06-04 10:02:35] 2025-06-04 08:02:35,446 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:02:35] 2025-06-04 08:02:35,451 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:02:35]  *** Error codes and diagnostics ***
[2025-06-04 10:02:35]     "exeErrorCode": 0,
[2025-06-04 10:02:35]     "exeErrorDiag": "",
[2025-06-04 10:02:35]     "pilotErrorCode": 0,
[2025-06-04 10:02:35]     "pilotErrorDiag": "",
[2025-06-04 10:02:35]  *** Listing of results directory ***
[2025-06-04 10:02:35] total 415228
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc    495897 May 28 10:16 pilot3.tar.gz
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc      5111 May 28 10:49 queuedata.json
[2025-06-04 10:02:35] -rwx------ 1 boinc boinc     37140 May 28 10:49 runpilot2-wrapper.sh
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:02:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:43 run_atlas
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:43 job.xml
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc      6687 Jun  4 06:43 init_data.xml
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc 223507388 Jun  4 06:43 EVNT.44871834._003189.pool.root.1
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:43 start_atlas.sh
[2025-06-04 10:02:35] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:43 shared
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc    508879 Jun  4 06:43 input.tar.gz
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:43 boinc_lockfile
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc      2558 Jun  4 06:43 pandaJob.out
[2025-06-04 10:02:35] -rw------- 1 boinc boinc    986077 Jun  4 06:43 agis_schedconf.cvmfs.json
[2025-06-04 10:02:35] drwx------ 4 boinc boinc      4096 Jun  4 06:43 pilot3
[2025-06-04 10:02:35] -rw------- 1 boinc boinc 194978050 Jun  4 10:01 HITS.44871837._081664.pool.root.1
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:01 boinc_task_state.xml
[2025-06-04 10:02:35] -rw------- 1 boinc boinc      1029 Jun  4 10:01 memory_monitor_summary.json
[2025-06-04 10:02:35] -rw------- 1 boinc boinc   1603667 Jun  4 10:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:02:35] -rw------- 1 boinc boinc    313644 Jun  4 10:02 log.44871837._081664.job.log.tgz.1
[2025-06-04 10:02:35] -rw------- 1 boinc boinc      7702 Jun  4 10:02 heartbeat.json
[2025-06-04 10:02:35] -rw------- 1 boinc boinc        95 Jun  4 10:02 pilot_heartbeat.json
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:02 boinc_mmap_file
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:02 wrapper_checkpoint.txt
[2025-06-04 10:02:35] -rw------- 1 boinc boinc      4746 Jun  4 10:02 pilotlog.txt
[2025-06-04 10:02:35] -rw------- 1 boinc boinc   1119713 Jun  4 10:02 log.44871837._081664.job.log.1
[2025-06-04 10:02:35] -rw------- 1 boinc boinc       357 Jun  4 10:02 output.list
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:02 runtime_log
[2025-06-04 10:02:35] -rw------- 1 boinc boinc   1454080 Jun  4 10:02 result.tar.gz
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc      9041 Jun  4 10:02 runtime_log.err
[2025-06-04 10:02:35] -rw------- 1 boinc boinc       665 Jun  4 10:02 RHYKDmyeRe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqETKDm5VkN0n.diag
[2025-06-04 10:02:35] -rw-r--r-- 1 boinc boinc     20810 Jun  4 10:02 stderr.txt
[2025-06-04 10:02:35] HITS file was successfully produced:
[2025-06-04 10:02:35] -rw------- 1 boinc boinc 194978050 Jun  4 10:01 shared/HITS.pool.root.1
[2025-06-04 10:02:35]  *** Contents of shared directory: ***
[2025-06-04 10:02:35] total 410628
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc 223507388 Jun  4 06:43 ATLAS.root_0
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:43 start_atlas.sh
[2025-06-04 10:02:35] -rw-r--r-- 2 boinc boinc    508879 Jun  4 06:43 input.tar.gz
[2025-06-04 10:02:35] -rw------- 1 boinc boinc 194978050 Jun  4 10:01 HITS.pool.root.1
[2025-06-04 10:02:35] -rw------- 1 boinc boinc   1454080 Jun  4 10:02 result.tar.gz
10:02:36 (1095728): run_atlas exited; CPU time 45991.841293
10:02:36 (1095728): called boinc_finish(0)

</stderr_txt>
]]>

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