Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:42:21 (9312): wrapper (7.7.26015): starting
08:42:21 (9312): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 08:42:21] Arguments: --nthreads 8
[2025-05-29 08:42:21] Threads: 8
[2025-05-29 08:42:21] Checking for CVMFS
[2025-05-29 08:42:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 08:42:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 08:42:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 08:42:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 08:42:22] 2.11.2.0 25755 24403 100328 146546 0 114 21522376 25165825 4360 130560 0 14675136 99.780 14664658 2191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 08:42:22] CVMFS is ok
[2025-05-29 08:42:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 08:42:22] Checking for apptainer binary...
[2025-05-29 08:42:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 08:42:22] Running /usr/bin/apptainer --version
[2025-05-29 08:42:22] apptainer version 1.3.2-1.el7
[2025-05-29 08:42:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 08:42:23] cg-vwn458.simple-grid.lan
[2025-05-29 08:42:23] apptainer works
[2025-05-29 08:42:23] Set ATHENA_PROC_NUMBER=8
[2025-05-29 08:42:23] Set ATHENA_CORE_NUMBER=8
[2025-05-29 08:42:23] Starting ATLAS job with PandaID=6668233185
[2025-05-29 08:42:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:14:51]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:14:51] 2025-05-29 11:28:36,466 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6668233185/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,466 | INFO     | extracted standard info from prmon json
[2025-05-29 14:14:51] 2025-05-29 11:28:36,467 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 14:14:51] 2025-05-29 11:28:36,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 14:14:51] 2025-05-29 11:28:36,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 14:14:51] 2025-05-29 11:28:36,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 14:14:51] 2025-05-29 11:28:36,472 | INFO     | fitting pss+swap vs Time
[2025-05-29 14:14:51] 2025-05-29 11:28:36,473 | INFO     | sum of square deviations: 6734191380.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,475 | INFO     | sum of deviations: -32930293497.00001
[2025-05-29 14:14:51] 2025-05-29 11:28:36,476 | INFO     | mean x: 1748509504.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,476 | INFO     | mean y: 2508570.394265233
[2025-05-29 14:14:51] 2025-05-29 11:28:36,476 | INFO     | -- intersect: 8552745399.127504
[2025-05-29 14:14:51] 2025-05-29 11:28:36,476 | INFO     | intersect: 8552745399.127504
[2025-05-29 14:14:51] 2025-05-29 11:28:36,477 | INFO     | chi2: 2.6298466930800983
[2025-05-29 14:14:51] 2025-05-29 11:28:36,477 | INFO     | sum of square deviations: 6378584712.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,479 | INFO     | sum of deviations: -13839523047.000002
[2025-05-29 14:14:51] 2025-05-29 11:28:36,480 | INFO     | mean x: 1748509351.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,480 | INFO     | mean y: 2516642.102189781
[2025-05-29 14:14:51] 2025-05-29 11:28:36,480 | INFO     | -- intersect: 3796232107.0011406
[2025-05-29 14:14:51] 2025-05-29 11:28:36,480 | INFO     | intersect: 3796232107.0011406
[2025-05-29 14:14:51] 2025-05-29 11:28:36,480 | INFO     | chi2: 1.8614616526197958
[2025-05-29 14:14:51] 2025-05-29 11:28:36,481 | INFO     | current chi2=1.8614616526197958 (change=29.217864390428154 %)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,481 | INFO     | sum of square deviations: 6035722470.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,489 | INFO     | sum of deviations: -13618878604.999998
[2025-05-29 14:14:51] 2025-05-29 11:28:36,490 | INFO     | mean x: 1748509199.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,490 | INFO     | mean y: 2516740.0371747212
[2025-05-29 14:14:51] 2025-05-29 11:28:36,490 | INFO     | -- intersect: 3947816518.028257
[2025-05-29 14:14:51] 2025-05-29 11:28:36,490 | INFO     | intersect: 3947816518.028257
[2025-05-29 14:14:51] 2025-05-29 11:28:36,490 | INFO     | chi2: 1.8606719577146205
[2025-05-29 14:14:51] 2025-05-29 11:28:36,491 | INFO     | current chi2=1.8606719577146205 (change=0.04242337756804848 %)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,491 | INFO     | right removable region: 268
[2025-05-29 14:14:51] 2025-05-29 11:28:36,491 | INFO     | sum of square deviations: 6378584712.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,493 | INFO     | sum of deviations: -79286718805.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,494 | INFO     | mean x: 1748509656.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,494 | INFO     | mean y: 2528299.3248175182
[2025-05-29 14:14:51] 2025-05-29 11:28:36,494 | INFO     | -- intersect: 21736753007.815258
[2025-05-29 14:14:51] 2025-05-29 11:28:36,494 | INFO     | intersect: 21736753007.815258
[2025-05-29 14:14:51] 2025-05-29 11:28:36,494 | INFO     | chi2: 1.037999490369362
[2025-05-29 14:14:51] 2025-05-29 11:28:36,495 | INFO     | current chi2=1.037999490369362 (change=60.53003800181035 %)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,495 | INFO     | sum of square deviations: 6035722470.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,497 | INFO     | sum of deviations: -79270391698.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,498 | INFO     | mean x: 1748509809.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,498 | INFO     | mean y: 2528269.75464684
[2025-05-29 14:14:51] 2025-05-29 11:28:36,498 | INFO     | -- intersect: 22966648660.668705
[2025-05-29 14:14:51] 2025-05-29 11:28:36,498 | INFO     | intersect: 22966648660.668705
[2025-05-29 14:14:51] 2025-05-29 11:28:36,498 | INFO     | chi2: 1.0193484633778893
[2025-05-29 14:14:51] 2025-05-29 11:28:36,499 | INFO     | current chi2=1.0193484633778893 (change=1.7968242917764634 %)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,499 | INFO     | left removable region: 20
[2025-05-29 14:14:51] 2025-05-29 11:28:36,499 | INFO     | sum of square deviations: 4729621702.0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,501 | INFO     | sum of deviations: -43558427715.49999
[2025-05-29 14:14:51] 2025-05-29 11:28:36,501 | INFO     | mean x: 1748509778.5
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | mean y: 2529783.8508064514
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | -- intersect: 16105791650.319035
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | intersect: 16105791650.319035
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | chi2: 0.20692054023894432
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | -- intersect: 16105791650.319035
[2025-05-29 14:14:51] 2025-05-29 11:28:36,502 | INFO     | current memory leak: -9.21 B/s (using 248 data points, chi2=0.21)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,510 | INFO     | ..............................
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . Timing measurements:
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . get job = 0 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . initial setup = 2 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . payload setup = 14 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . stage-in = 0 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . payload execution = 17017 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . stage-out = 4 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,511 | INFO     | . log creation = 1 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,512 | INFO     | ..............................
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | 
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | job summary report
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | --------------------------------------------------
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | PanDA job id: 6668233185
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | task id: 44871837
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | errors: (none)
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | pilot state: finished 
[2025-05-29 14:14:51] 2025-05-29 11:28:36,651 | INFO     | transexitcode: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | exeerrorcode: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | exeerrordiag: 
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | exitcode: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | exitmsg: OK
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | cpuconsumptiontime: 64618 s
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | nevents: 400
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | neventsw: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | pid: 21579
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | pgrp: 21579
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | corecount: 8
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | event service: False
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | sizes: {0: 2404405, 1: 2405262, 2: 2405262, 12: 2405524, 17036: 2436525, 17037: 2436524, 17042: 2445707, 17134: 2445821}
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | --------------------------------------------------
[2025-05-29 14:14:51] 2025-05-29 11:28:36,652 | INFO     | 
[2025-05-29 14:14:51] 2025-05-29 11:28:36,653 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:14:51] 2025-05-29 11:28:37,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:14:51] 2025-05-29 11:28:37,169 | INFO     | job 6668233185 has completed (purged errors)
[2025-05-29 14:14:51] 2025-05-29 11:28:37,169 | INFO     | overall cleanup function is called
[2025-05-29 14:14:51] 2025-05-29 11:28:38,177 | INFO     | --- collectZombieJob: --- 10, [21579]
[2025-05-29 14:14:51] 2025-05-29 11:28:38,177 | INFO     | zombie collector waiting for pid 21579
[2025-05-29 14:14:51] 2025-05-29 11:28:38,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:14:51] 2025-05-29 11:28:38,178 | INFO     | collected zombie processes
[2025-05-29 14:14:51] 2025-05-29 11:28:38,178 | INFO     | will attempt to kill all subprocesses of pid=21579
[2025-05-29 14:14:51] 2025-05-29 11:28:38,279 | INFO     | process IDs to be killed: [21579] (in reverse order)
[2025-05-29 14:14:51] 2025-05-29 11:28:39,195 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:14:51] 2025-05-29 11:28:39,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:14:51] 2025-05-29 11:28:39,198 | INFO     | did not find any defunct processes belonging to 21579
[2025-05-29 14:14:51] 2025-05-29 11:28:39,201 | INFO     | did not find any defunct processes belonging to 21579
[2025-05-29 14:14:51] 2025-05-29 11:28:39,201 | INFO     | ready for new job
[2025-05-29 14:14:51] 2025-05-29 11:28:39,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:14:51] 2025-05-29 11:28:39,203 | INFO     | **************************************
[2025-05-29 14:14:51] 2025-05-29 11:28:39,203 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:14:51] 2025-05-29 11:28:39,203 | INFO     | **************************************
[2025-05-29 14:14:51] 2025-05-29 11:28:39,203 | INFO     | 
[2025-05-29 14:14:51] 2025-05-29 11:28:39,211 | INFO     | pilot is running in a VM
[2025-05-29 14:14:51] 2025-05-29 11:28:39,211 | INFO     | architecture information:
[2025-05-29 14:14:51] 2025-05-29 11:28:39,211 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:14:51] 2025-05-29 11:28:39,498 | INFO     | cat /etc/os-release:
[2025-05-29 14:14:51] NAME="CentOS Linux"
[2025-05-29 14:14:51] VERSION="7 (Core)"
[2025-05-29 14:14:51] ID="centos"
[2025-05-29 14:14:51] ID_LIKE="rhel fedora"
[2025-05-29 14:14:51] VERSION_ID="7"
[2025-05-29 14:14:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:14:51] ANSI_COLOR="0;31"
[2025-05-29 14:14:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:14:51] HOME_URL="https://www.centos.org/"
[2025-05-29 14:14:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:14:51] 
[2025-05-29 14:14:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:14:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:14:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:14:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:14:51] 
[2025-05-29 14:14:51] 2025-05-29 11:28:39,499 | INFO     | **************************************
[2025-05-29 14:14:51] 2025-05-29 11:28:40,002 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-29 14:14:51] 2025-05-29 11:28:40,260 | INFO     | sufficient remaining disk space (496250126336 B)
[2025-05-29 14:14:51] 2025-05-29 11:28:40,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:14:51] 2025-05-29 11:28:40,261 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:14:51] 2025-05-29 11:28:40,261 | INFO     | update_server=False
[2025-05-29 14:14:51] 2025-05-29 11:28:40,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:14:51] 2025-05-29 11:28:40,436 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:14:51] 2025-05-29 11:28:40,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:14:51] 2025-05-29 11:28:40,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:14:51] 2025-05-29 11:28:40,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:14:51] 2025-05-29 11:28:40,541 | INFO     | aborting loop
[2025-05-29 14:14:51] 2025-05-29 11:28:40,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:14:51] 2025-05-29 11:28:40,774 | INFO     | all job control threads have been joined
[2025-05-29 14:14:51] 2025-05-29 11:28:40,795 | INFO     | all payload control threads have been joined
[2025-05-29 14:14:51] 2025-05-29 11:28:41,032 | INFO     | all data control threads have been joined
[2025-05-29 14:14:51] 2025-05-29 11:28:41,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:14:51] 2025-05-29 11:28:41,265 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,547 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,575 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,593 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:14:51] 2025-05-29 11:28:41,722 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,756 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,780 | INFO     | [job] control thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:41,801 | INFO     | [payload] control thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,001 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,038 | INFO     | [data] control thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,133 | INFO     | [job] validate thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,319 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,386 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,660 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:42,671 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:45,229 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:14:51] 2025-05-29 11:28:46,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665552766784)>', '<ExcThread(monitor, started 139665239676672)>']
[2025-05-29 14:14:51] 2025-05-29 11:28:47,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:14:51] 2025-05-29 11:28:47,477 | INFO     | [monitor] control thread has ended
[2025-05-29 14:14:51] 2025-05-29 11:28:51,847 | INFO     | all workflow threads have been joined
[2025-05-29 14:14:51] 2025-05-29 11:28:51,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:14:51] 2025-05-29 11:28:51,848 | INFO     | traces error code: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:51,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:14:51] 2025-05-29 11:28:52,263 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:14:51] 2025-05-29 11:28:52,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:14:51] 2025-05-29 11:28:52,473 [wrapper] pilotpid: 13028
[2025-05-29 14:14:51] 2025-05-29 11:28:52,564 [wrapper] Pilot exit status: 0
[2025-05-29 14:14:51] 2025-05-29 11:28:53,019 [wrapper] pandaids: 6668233185
[2025-05-29 14:14:51] 2025-05-29 11:28:54,105 [wrapper] cleanup supervisor_pilot 28102 13029
[2025-05-29 14:14:51] 2025-05-29 11:28:54,221 [wrapper] Test setup, not cleaning
[2025-05-29 14:14:51] 2025-05-29 11:28:54,269 [wrapper] apfmon messages muted
[2025-05-29 14:14:51] 2025-05-29 11:28:54,353 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:14:51] 2025-05-29 11:28:54,444 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:14:51]  *** Error codes and diagnostics ***
[2025-05-29 14:14:51]     "exeErrorCode": 0,
[2025-05-29 14:14:51]     "exeErrorDiag": "",
[2025-05-29 14:14:51]     "pilotErrorCode": 0,
[2025-05-29 14:14:51]     "pilotErrorDiag": "",
[2025-05-29 14:14:51]  *** Listing of results directory ***
[2025-05-29 14:14:51] total 418448
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc    495897 May 28 10:16 pilot3.tar.gz
[2025-05-29 14:14:51] -rwx------. 1 boinc boinc     37140 May 28 10:43 runpilot2-wrapper.sh
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc      5111 May 28 10:43 queuedata.json
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc       100 May 29 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:14:51] -rwxr-xr-x. 1 boinc boinc      7986 May 29 08:42 run_atlas
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc       105 May 29 08:42 job.xml
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc      6372 May 29 08:42 init_data.xml
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc 225201707 May 29 08:42 EVNT.44871834._003183.pool.root.1
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc     15093 May 29 08:42 start_atlas.sh
[2025-05-29 14:14:51] drwxrwx--x. 2 boinc boinc        68 May 29 08:42 shared
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc    508875 May 29 08:42 input.tar.gz
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc         0 May 29 08:42 boinc_lockfile
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc      2558 May 29 08:42 pandaJob.out
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc    993147 May 29 08:42 agis_schedconf.cvmfs.json
[2025-05-29 14:14:51] drwx------. 4 boinc boinc      4096 May 29 08:42 pilot3
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc 195692445 May 29 13:25 HITS.44871837._081518.pool.root.1
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc       531 May 29 13:26 boinc_task_state.xml
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc      1017 May 29 13:26 memory_monitor_summary.json
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc   1603667 May 29 13:27 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc    412592 May 29 13:27 log.44871837._081518.job.log.tgz.1
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc        95 May 29 13:28 pilot_heartbeat.json
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc      7691 May 29 13:28 heartbeat.json
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc      4417 May 29 13:28 pilotlog.txt
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc   1473353 May 29 13:28 log.44871837._081518.job.log.1
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc       357 May 29 13:28 output.list
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc       620 May 29 13:28 runtime_log
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc   1904640 May 29 13:28 result.tar.gz
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc       657 May 29 13:28 v24MDmzYRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVhbKDmKkXNxm.diag
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc      8673 May 29 13:28 runtime_log.err
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc      8192 May 29 14:14 boinc_mmap_file
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc        28 May 29 14:14 wrapper_checkpoint.txt
[2025-05-29 14:14:51] -rw-r--r--. 1 boinc boinc     20494 May 29 14:14 stderr.txt
[2025-05-29 14:14:51] HITS file was successfully produced:
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc 195692445 May 29 13:25 shared/HITS.pool.root.1
[2025-05-29 14:14:51]  *** Contents of shared directory: ***
[2025-05-29 14:14:51] total 413408
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc 225201707 May 29 08:42 ATLAS.root_0
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc     15093 May 29 08:42 start_atlas.sh
[2025-05-29 14:14:51] -rw-r--r--. 2 boinc boinc    508875 May 29 08:42 input.tar.gz
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc 195692445 May 29 13:25 HITS.pool.root.1
[2025-05-29 14:14:51] -rw-------. 1 boinc boinc   1904640 May 29 13:28 result.tar.gz
14:14:53 (9312): run_atlas exited; CPU time 64826.739796
14:14:53 (9312): called boinc_finish(0)

</stderr_txt>
]]>

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