Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:05 (18792): wrapper (7.7.26015): starting
07:49:05 (18792): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 07:49:05] Arguments: --nthreads 8
[2025-05-29 07:49:05] Threads: 8
[2025-05-29 07:49:05] Checking for CVMFS
[2025-05-29 07:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:49:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:49:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:49:08] 2.11.2.0 20015 24178 90708 146544 0 114 16692010 25165824 4353 130560 0 13061135 99.803 14929426 1688 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 07:49:08] CVMFS is ok
[2025-05-29 07:49:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:49:08] Checking for apptainer binary...
[2025-05-29 07:49:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:49:08] Running /usr/bin/apptainer --version
[2025-05-29 07:49:08] apptainer version 1.3.2-1.el7
[2025-05-29 07:49:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:49:10] cg-vwn356.simple-grid.lan
[2025-05-29 07:49:10] apptainer works
[2025-05-29 07:49:10] Set ATHENA_PROC_NUMBER=8
[2025-05-29 07:49:10] Set ATHENA_CORE_NUMBER=8
[2025-05-29 07:49:10] Starting ATLAS job with PandaID=6668210689
[2025-05-29 07:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 13:00:37]  *** The last 200 lines of the pilot log: ***
[2025-05-29 13:00:37] 2025-05-29 11:00:20,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 13:00:37] 2025-05-29 11:00:20,836 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 13:00:37] 2025-05-29 11:00:20,842 | INFO     | fitting pss+swap vs Time
[2025-05-29 13:00:37] 2025-05-29 11:00:20,843 | INFO     | sum of square deviations: 8797783560.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,846 | INFO     | sum of deviations: 32145437424.000015
[2025-05-29 13:00:37] 2025-05-29 11:00:20,847 | INFO     | mean x: 1748507124.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,847 | INFO     | mean y: 2486622.8163934425
[2025-05-29 13:00:37] 2025-05-29 11:00:20,847 | INFO     | -- intersect: -6386227756.963169
[2025-05-29 13:00:37] 2025-05-29 11:00:20,847 | INFO     | intersect: -6386227756.963169
[2025-05-29 13:00:37] 2025-05-29 11:00:20,847 | INFO     | chi2: 2.360466608977073
[2025-05-29 13:00:37] 2025-05-29 11:00:20,848 | INFO     | sum of square deviations: 8372156975.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,851 | INFO     | sum of deviations: 51716196194.99999
[2025-05-29 13:00:37] 2025-05-29 11:00:20,851 | INFO     | mean x: 1748506971.5
[2025-05-29 13:00:37] 2025-05-29 11:00:20,851 | INFO     | mean y: 2493538.3533333335
[2025-05-29 13:00:37] 2025-05-29 11:00:20,851 | INFO     | -- intersect: -10798322769.372343
[2025-05-29 13:00:37] 2025-05-29 11:00:20,851 | INFO     | intersect: -10798322769.372343
[2025-05-29 13:00:37] 2025-05-29 11:00:20,852 | INFO     | chi2: 1.5871767550589708
[2025-05-29 13:00:37] 2025-05-29 11:00:20,852 | INFO     | current chi2=1.5871767550589708 (change=32.76004206021001 %)
[2025-05-29 13:00:37] 2025-05-29 11:00:20,853 | INFO     | sum of square deviations: 7960484140.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,855 | INFO     | sum of deviations: 50664182753.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | mean x: 1748506819.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | mean y: 2493148.5830508475
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | -- intersect: -11125808530.651585
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | intersect: -11125808530.651585
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | chi2: 1.5876530632728514
[2025-05-29 13:00:37] 2025-05-29 11:00:20,856 | INFO     | current chi2=1.5876530632728514 (change=-0.030009777572811275 %)
[2025-05-29 13:00:37] 2025-05-29 11:00:20,857 | INFO     | right removable region: 294
[2025-05-29 13:00:37] 2025-05-29 11:00:20,857 | INFO     | sum of square deviations: 8372156975.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,860 | INFO     | sum of deviations: -17722509431.5
[2025-05-29 13:00:37] 2025-05-29 11:00:20,860 | INFO     | mean x: 1748507276.5
[2025-05-29 13:00:37] 2025-05-29 11:00:20,860 | INFO     | mean y: 2504373.05
[2025-05-29 13:00:37] 2025-05-29 11:00:20,860 | INFO     | -- intersect: 3703812983.4057717
[2025-05-29 13:00:37] 2025-05-29 11:00:20,860 | INFO     | intersect: 3703812983.4057717
[2025-05-29 13:00:37] 2025-05-29 11:00:20,861 | INFO     | chi2: 0.8873847223426221
[2025-05-29 13:00:37] 2025-05-29 11:00:20,861 | INFO     | current chi2=0.8873847223426221 (change=62.40638528976364 %)
[2025-05-29 13:00:37] 2025-05-29 11:00:20,861 | INFO     | sum of square deviations: 7960484140.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,864 | INFO     | sum of deviations: -16592714554.000004
[2025-05-29 13:00:37] 2025-05-29 11:00:20,864 | INFO     | mean x: 1748507429.0
[2025-05-29 13:00:37] 2025-05-29 11:00:20,864 | INFO     | mean y: 2503935.4576271186
[2025-05-29 13:00:37] 2025-05-29 11:00:20,865 | INFO     | -- intersect: 3647066772.9316587
[2025-05-29 13:00:37] 2025-05-29 11:00:20,865 | INFO     | intersect: 3647066772.9316587
[2025-05-29 13:00:37] 2025-05-29 11:00:20,865 | INFO     | chi2: 0.8727916876888268
[2025-05-29 13:00:37] 2025-05-29 11:00:20,865 | INFO     | current chi2=0.8727916876888268 (change=1.6444991993180762 %)
[2025-05-29 13:00:37] 2025-05-29 11:00:20,865 | INFO     | left removable region: 20
[2025-05-29 13:00:37] 2025-05-29 11:00:20,866 | INFO     | sum of square deviations: 6378584712.5
[2025-05-29 13:00:37] 2025-05-29 11:00:20,868 | INFO     | sum of deviations: 19453197924.000015
[2025-05-29 13:00:37] 2025-05-29 11:00:20,868 | INFO     | mean x: 1748507398.5
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | mean y: 2504309.8540145988
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | -- intersect: -5330036061.984603
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | intersect: -5330036061.984603
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | chi2: 0.003720783113753388
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | -- intersect: -5330036061.984603
[2025-05-29 13:00:37] 2025-05-29 11:00:20,869 | INFO     | current memory leak: 3.05 B/s (using 274 data points, chi2=0.00)
[2025-05-29 13:00:37] 2025-05-29 11:00:20,870 | INFO     | ..............................
[2025-05-29 13:00:37] 2025-05-29 11:00:20,870 | INFO     | . Timing measurements:
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . get job = 0 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . initial setup = 2 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . payload setup = 13 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . stage-in = 0 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . payload execution = 18576 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . stage-out = 1 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | . log creation = 0 s
[2025-05-29 13:00:37] 2025-05-29 11:00:20,871 | INFO     | ..............................
[2025-05-29 13:00:37] 2025-05-29 11:00:20,876 | INFO     | monitor loop #1256: job 0:6668210689 is in state 'finished'
[2025-05-29 13:00:37] 2025-05-29 11:00:20,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 13:00:37] 2025-05-29 11:00:21,430 | INFO     | 
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | job summary report
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | --------------------------------------------------
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | PanDA job id: 6668210689
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | task id: 44871837
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | errors: (none)
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | pilot state: finished 
[2025-05-29 13:00:37] 2025-05-29 11:00:21,431 | INFO     | transexitcode: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | exeerrorcode: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | exeerrordiag: 
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | exitcode: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | exitmsg: OK
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | cpuconsumptiontime: 71835 s
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | nevents: 400
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | neventsw: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | pid: 31102
[2025-05-29 13:00:37] 2025-05-29 11:00:21,432 | INFO     | pgrp: 31102
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | corecount: 8
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | event service: False
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 17: 2405445, 22: 2405473, 18593: 2437161, 18594: 2437288, 18596: 2446285, 18597: 2446341, 18607: 2446511}
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | --------------------------------------------------
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | 
[2025-05-29 13:00:37] 2025-05-29 11:00:21,433 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-29 13:00:37] 2025-05-29 11:00:21,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 13:00:37] 2025-05-29 11:00:21,497 | INFO     | job 6668210689 has completed (purged errors)
[2025-05-29 13:00:37] 2025-05-29 11:00:21,498 | INFO     | overall cleanup function is called
[2025-05-29 13:00:37] 2025-05-29 11:00:22,506 | INFO     | --- collectZombieJob: --- 10, [31102]
[2025-05-29 13:00:37] 2025-05-29 11:00:22,506 | INFO     | zombie collector waiting for pid 31102
[2025-05-29 13:00:37] 2025-05-29 11:00:22,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 13:00:37] 2025-05-29 11:00:22,506 | INFO     | collected zombie processes
[2025-05-29 13:00:37] 2025-05-29 11:00:22,507 | INFO     | will attempt to kill all subprocesses of pid=31102
[2025-05-29 13:00:37] 2025-05-29 11:00:22,603 | INFO     | process IDs to be killed: [31102] (in reverse order)
[2025-05-29 13:00:37] 2025-05-29 11:00:22,664 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 13:00:37] 2025-05-29 11:00:22,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 13:00:37] 2025-05-29 11:00:22,668 | INFO     | did not find any defunct processes belonging to 31102
[2025-05-29 13:00:37] 2025-05-29 11:00:22,671 | INFO     | did not find any defunct processes belonging to 31102
[2025-05-29 13:00:37] 2025-05-29 11:00:22,672 | INFO     | ready for new job
[2025-05-29 13:00:37] 2025-05-29 11:00:22,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 13:00:37] 2025-05-29 11:00:22,674 | INFO     | **************************************
[2025-05-29 13:00:37] 2025-05-29 11:00:22,674 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 13:00:37] 2025-05-29 11:00:22,674 | INFO     | **************************************
[2025-05-29 13:00:37] 2025-05-29 11:00:22,675 | INFO     | 
[2025-05-29 13:00:37] 2025-05-29 11:00:22,675 | INFO     | pilot is running in a VM
[2025-05-29 13:00:37] 2025-05-29 11:00:22,675 | INFO     | architecture information:
[2025-05-29 13:00:37] 2025-05-29 11:00:22,676 | INFO     | executing command: cat /etc/os-release
[2025-05-29 13:00:37] 2025-05-29 11:00:22,695 | INFO     | cat /etc/os-release:
[2025-05-29 13:00:37] NAME="CentOS Linux"
[2025-05-29 13:00:37] VERSION="7 (Core)"
[2025-05-29 13:00:37] ID="centos"
[2025-05-29 13:00:37] ID_LIKE="rhel fedora"
[2025-05-29 13:00:37] VERSION_ID="7"
[2025-05-29 13:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 13:00:37] ANSI_COLOR="0;31"
[2025-05-29 13:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 13:00:37] HOME_URL="https://www.centos.org/"
[2025-05-29 13:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 13:00:37] 
[2025-05-29 13:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 13:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 13:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 13:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 13:00:37] 
[2025-05-29 13:00:37] 2025-05-29 11:00:22,695 | INFO     | **************************************
[2025-05-29 13:00:37] 2025-05-29 11:00:23,199 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-29 13:00:37] 2025-05-29 11:00:23,219 | INFO     | sufficient remaining disk space (496049848320 B)
[2025-05-29 13:00:37] 2025-05-29 11:00:23,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 13:00:37] 2025-05-29 11:00:23,219 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 13:00:37] 2025-05-29 11:00:23,219 | INFO     | update_server=False
[2025-05-29 13:00:37] 2025-05-29 11:00:23,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 13:00:37] 2025-05-29 11:00:23,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 13:00:37] 2025-05-29 11:00:23,299 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 13:00:37] 2025-05-29 11:00:23,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 13:00:37] 2025-05-29 11:00:23,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 13:00:37] 2025-05-29 11:00:23,379 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 13:00:37] 2025-05-29 11:00:23,380 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 13:00:37] 2025-05-29 11:00:23,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 13:00:37] 2025-05-29 11:00:23,380 | INFO     | will abort loop
[2025-05-29 13:00:37] 2025-05-29 11:00:24,075 | INFO     | all data control threads have been joined
[2025-05-29 13:00:37] 2025-05-29 11:00:24,103 | INFO     | all job control threads have been joined
[2025-05-29 13:00:37] 2025-05-29 11:00:24,197 | INFO     | all payload control threads have been joined
[2025-05-29 13:00:37] 2025-05-29 11:00:24,224 | INFO     | [job] retrieve thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:24,387 | INFO     | [job] job monitor thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:24,403 | INFO     | [payload] validate_post thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:24,422 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:24,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,081 | INFO     | [data] control thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,110 | INFO     | [job] control thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,203 | INFO     | [payload] control thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,227 | INFO     | [data] copytool_out thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 13:00:37] 2025-05-29 11:00:25,631 | INFO     | [job] validate thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,642 | INFO     | [data] copytool_in thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,665 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,700 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:25,720 | INFO     | [payload] failed_post thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:26,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 13:00:37] 2025-05-29 11:00:27,034 | INFO     | [job] queue monitor thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:29,513 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 13:00:37] 2025-05-29 11:00:31,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200020305728)>', '<ExcThread(monitor, started 140199208154880)>']
[2025-05-29 13:00:37] 2025-05-29 11:00:32,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 13:00:37] 2025-05-29 11:00:32,354 | INFO     | [monitor] control thread has ended
[2025-05-29 13:00:37] 2025-05-29 11:00:36,555 | INFO     | all workflow threads have been joined
[2025-05-29 13:00:37] 2025-05-29 11:00:36,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 13:00:37] 2025-05-29 11:00:36,556 | INFO     | traces error code: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:36,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 13:00:37] 2025-05-29 11:00:36,746 [wrapper] ==== pilot stdout END ====
[2025-05-29 13:00:37] 2025-05-29 11:00:36,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 13:00:37] 2025-05-29 11:00:36,754 [wrapper] pilotpid: 22562
[2025-05-29 13:00:37] 2025-05-29 11:00:36,768 [wrapper] Pilot exit status: 0
[2025-05-29 13:00:37] 2025-05-29 11:00:36,790 [wrapper] pandaids: 6668210689
[2025-05-29 13:00:37] 2025-05-29 11:00:36,873 [wrapper] cleanup supervisor_pilot  9401 22563
[2025-05-29 13:00:37] 2025-05-29 11:00:36,877 [wrapper] Test setup, not cleaning
[2025-05-29 13:00:37] 2025-05-29 11:00:36,880 [wrapper] apfmon messages muted
[2025-05-29 13:00:37] 2025-05-29 11:00:36,884 [wrapper] ==== wrapper stdout END ====
[2025-05-29 13:00:37] 2025-05-29 11:00:36,888 [wrapper] ==== wrapper stderr END ====
[2025-05-29 13:00:37]  *** Error codes and diagnostics ***
[2025-05-29 13:00:37]     "exeErrorCode": 0,
[2025-05-29 13:00:37]     "exeErrorDiag": "",
[2025-05-29 13:00:37]     "pilotErrorCode": 0,
[2025-05-29 13:00:37]     "pilotErrorDiag": "",
[2025-05-29 13:00:37]  *** Listing of results directory ***
[2025-05-29 13:00:37] total 420084
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc    495897 May 28 08:52 pilot3.tar.gz
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc      5111 May 28 08:58 queuedata.json
[2025-05-29 13:00:37] -rwx------. 1 boinc boinc     37140 May 28 08:58 runpilot2-wrapper.sh
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc       100 May 29 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 13:00:37] -rwxr-xr-x. 1 boinc boinc      7986 May 29 07:49 run_atlas
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc       105 May 29 07:49 job.xml
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc      6372 May 29 07:49 init_data.xml
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc 225970347 May 29 07:49 EVNT.44871834._003138.pool.root.1
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc     15093 May 29 07:49 start_atlas.sh
[2025-05-29 13:00:37] drwxrwx--x. 2 boinc boinc        68 May 29 07:49 shared
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc    508878 May 29 07:49 input.tar.gz
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc         0 May 29 07:49 boinc_lockfile
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc      2558 May 29 07:49 pandaJob.out
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc    993415 May 29 07:49 agis_schedconf.cvmfs.json
[2025-05-29 13:00:37] drwx------. 4 boinc boinc      4096 May 29 07:49 pilot3
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc 196327401 May 29 12:59 HITS.44871837._080377.pool.root.1
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc       531 May 29 12:59 boinc_task_state.xml
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc      1017 May 29 13:00 memory_monitor_summary.json
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc   1603667 May 29 13:00 agis_ddmendpoints.agis.ALL.json
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc    430411 May 29 13:00 log.44871837._080377.job.log.tgz.1
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc        28 May 29 13:00 wrapper_checkpoint.txt
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc      8192 May 29 13:00 boinc_mmap_file
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc      7684 May 29 13:00 heartbeat.json
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc        95 May 29 13:00 pilot_heartbeat.json
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc      4602 May 29 13:00 pilotlog.txt
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc   1586837 May 29 13:00 log.44871837._080377.job.log.1
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc       357 May 29 13:00 output.list
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc       620 May 29 13:00 runtime_log
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc   2037760 May 29 13:00 result.tar.gz
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc      8659 May 29 13:00 runtime_log.err
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc       657 May 29 13:00 14YLDmhvPe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUbKDmmTVpTm.diag
[2025-05-29 13:00:37] -rw-r--r--. 1 boinc boinc     20544 May 29 13:00 stderr.txt
[2025-05-29 13:00:37] HITS file was successfully produced:
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc 196327401 May 29 12:59 shared/HITS.pool.root.1
[2025-05-29 13:00:37]  *** Contents of shared directory: ***
[2025-05-29 13:00:37] total 414912
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc 225970347 May 29 07:49 ATLAS.root_0
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc     15093 May 29 07:49 start_atlas.sh
[2025-05-29 13:00:37] -rw-r--r--. 2 boinc boinc    508878 May 29 07:49 input.tar.gz
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc 196327401 May 29 12:59 HITS.pool.root.1
[2025-05-29 13:00:37] -rw-------. 1 boinc boinc   2037760 May 29 13:00 result.tar.gz
13:00:38 (18792): run_atlas exited; CPU time 72073.567536
13:00:38 (18792): called boinc_finish(0)

</stderr_txt>
]]>

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