Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:14:53 (19347): wrapper (7.7.26015): starting
22:14:53 (19347): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 22:14:53] Arguments: --nthreads 8
[2025-05-28 22:14:53] Threads: 8
[2025-05-28 22:14:53] Checking for CVMFS
[2025-05-28 22:14:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 22:14:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 22:14:54] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 22:14:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 22:14:55] 2.11.2.0 11048 23644 95420 146529 0 101 21797295 25165824 4639 130560 0 13028713 99.741 14552311 5216 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 22:14:55] CVMFS is ok
[2025-05-28 22:14:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 22:14:55] Checking for apptainer binary...
[2025-05-28 22:14:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 22:14:55] Running /usr/bin/apptainer --version
[2025-05-28 22:14:55] apptainer version 1.3.2-1.el7
[2025-05-28 22:14:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 22:15:09] cg-vwn330.simple-grid.lan
[2025-05-28 22:15:09] apptainer works
[2025-05-28 22:15:09] Set ATHENA_PROC_NUMBER=8
[2025-05-28 22:15:09] Set ATHENA_CORE_NUMBER=8
[2025-05-28 22:15:09] Starting ATLAS job with PandaID=6668229815
[2025-05-28 22:15:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 03:53:27]  *** The last 200 lines of the pilot log: ***
[2025-05-29 03:53:27] 2025-05-29 01:35:14,109 | INFO     | extracted standard info from prmon json
[2025-05-29 03:53:27] 2025-05-29 01:35:14,109 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 03:53:27] 2025-05-29 01:35:14,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 03:53:27] 2025-05-29 01:35:14,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 03:53:27] 2025-05-29 01:35:14,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 03:53:27] 2025-05-29 01:35:14,115 | INFO     | fitting pss+swap vs Time
[2025-05-29 03:53:27] 2025-05-29 01:35:14,116 | INFO     | sum of square deviations: 8540720135.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,119 | INFO     | sum of deviations: 88397233383.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,120 | INFO     | mean x: 1748473192.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,120 | INFO     | mean y: 2461167.0298013245
[2025-05-29 03:53:27] 2025-05-29 01:35:14,120 | INFO     | -- intersect: -18094396054.620327
[2025-05-29 03:53:27] 2025-05-29 01:35:14,120 | INFO     | intersect: -18094396054.620327
[2025-05-29 03:53:27] 2025-05-29 01:35:14,121 | INFO     | chi2: 7.684537653364847
[2025-05-29 03:53:27] 2025-05-29 01:35:14,121 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,129 | INFO     | sum of deviations: 107013525856.00003
[2025-05-29 03:53:27] 2025-05-29 01:35:14,129 | INFO     | mean x: 1748473040.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,129 | INFO     | mean y: 2467873.127946128
[2025-05-29 03:53:27] 2025-05-29 01:35:14,130 | INFO     | -- intersect: -23030757928.511215
[2025-05-29 03:53:27] 2025-05-29 01:35:14,130 | INFO     | intersect: -23030757928.511215
[2025-05-29 03:53:27] 2025-05-29 01:35:14,130 | INFO     | chi2: 6.968552948554594
[2025-05-29 03:53:27] 2025-05-29 01:35:14,130 | INFO     | current chi2=6.968552948554594 (change=9.317212526074922 %)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,130 | INFO     | right removable region: 296
[2025-05-29 03:53:27] 2025-05-29 01:35:14,131 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,134 | INFO     | sum of deviations: -20109765445.999992
[2025-05-29 03:53:27] 2025-05-29 01:35:14,141 | INFO     | mean x: 1748473345.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,142 | INFO     | mean y: 2500811.8080808083
[2025-05-29 03:53:27] 2025-05-29 01:35:14,142 | INFO     | -- intersect: 4330858796.73594
[2025-05-29 03:53:27] 2025-05-29 01:35:14,142 | INFO     | intersect: 4330858796.73594
[2025-05-29 03:53:27] 2025-05-29 01:35:14,142 | INFO     | chi2: 2.6197924972858098
[2025-05-29 03:53:27] 2025-05-29 01:35:14,142 | INFO     | current chi2=2.6197924972858098 (change=65.9082612974292 %)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,143 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,146 | INFO     | sum of deviations: -75210627283.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,146 | INFO     | mean x: 1748473497.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,146 | INFO     | mean y: 2521543.7808219176
[2025-05-29 03:53:27] 2025-05-29 01:35:14,146 | INFO     | -- intersect: 17036511230.795639
[2025-05-29 03:53:27] 2025-05-29 01:35:14,146 | INFO     | intersect: 17036511230.795639
[2025-05-29 03:53:27] 2025-05-29 01:35:14,147 | INFO     | chi2: 1.0410570078359034
[2025-05-29 03:53:27] 2025-05-29 01:35:14,147 | INFO     | current chi2=1.0410570078359034 (change=60.261852459136655 %)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,147 | INFO     | sum of square deviations: 7330250928.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,150 | INFO     | sum of deviations: -79255306459.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,150 | INFO     | mean x: 1748473650.0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,150 | INFO     | mean y: 2523104.174216028
[2025-05-29 03:53:27] 2025-05-29 01:35:14,150 | INFO     | -- intersect: 18907171297.990635
[2025-05-29 03:53:27] 2025-05-29 01:35:14,151 | INFO     | intersect: 18907171297.990635
[2025-05-29 03:53:27] 2025-05-29 01:35:14,151 | INFO     | chi2: 1.0040812457187633
[2025-05-29 03:53:27] 2025-05-29 01:35:14,151 | INFO     | current chi2=1.0040812457187633 (change=3.551751905882982 %)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,151 | INFO     | left removable region: 30
[2025-05-29 03:53:27] 2025-05-29 01:35:14,152 | INFO     | sum of square deviations: 5836025702.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,154 | INFO     | sum of deviations: -31686967005.500004
[2025-05-29 03:53:27] 2025-05-29 01:35:14,154 | INFO     | mean x: 1748473924.5
[2025-05-29 03:53:27] 2025-05-29 01:35:14,154 | INFO     | mean y: 2519501.612781955
[2025-05-29 03:53:27] 2025-05-29 01:35:14,155 | INFO     | -- intersect: 9495938204.665281
[2025-05-29 03:53:27] 2025-05-29 01:35:14,155 | INFO     | intersect: 9495938204.665281
[2025-05-29 03:53:27] 2025-05-29 01:35:14,155 | INFO     | chi2: 0.16002867132406362
[2025-05-29 03:53:27] 2025-05-29 01:35:14,155 | INFO     | -- intersect: 9495938204.665281
[2025-05-29 03:53:27] 2025-05-29 01:35:14,155 | INFO     | current memory leak: -5.43 B/s (using 266 data points, chi2=0.16)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,156 | INFO     | ..............................
[2025-05-29 03:53:27] 2025-05-29 01:35:14,156 | INFO     | . Timing measurements:
[2025-05-29 03:53:27] 2025-05-29 01:35:14,156 | INFO     | . get job = 0 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . initial setup = 5 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . payload setup = 147 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . stage-in = 0 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . payload execution = 18555 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . stage-out = 4 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | . log creation = 1 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,157 | INFO     | ..............................
[2025-05-29 03:53:27] 2025-05-29 01:35:14,360 | INFO     | 
[2025-05-29 03:53:27] 2025-05-29 01:35:14,360 | INFO     | job summary report
[2025-05-29 03:53:27] 2025-05-29 01:35:14,360 | INFO     | --------------------------------------------------
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | PanDA job id: 6668229815
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | task id: 44871837
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | errors: (none)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | pilot state: finished 
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | transexitcode: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | exeerrorcode: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | exeerrordiag: 
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | exitcode: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,361 | INFO     | exitmsg: OK
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | cpuconsumptiontime: 69995 s
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | nevents: 400
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | neventsw: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | pid: 8038
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | pgrp: 8038
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | corecount: 8
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | event service: False
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405290, 12: 2405290, 23: 2405318, 34: 2405346, 45: 2405502, 55: 2405530, 66: 2405558, 77: 2405586, 88: 2406156, 98: 2406156, 18
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | --------------------------------------------------
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | 
[2025-05-29 03:53:27] 2025-05-29 01:35:14,362 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-29 03:53:27] 2025-05-29 01:35:14,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | job 6668229815 has completed (purged errors)
[2025-05-29 03:53:27] 2025-05-29 01:35:14,986 | INFO     | overall cleanup function is called
[2025-05-29 03:53:27] 2025-05-29 01:35:15,995 | INFO     | --- collectZombieJob: --- 10, [8038]
[2025-05-29 03:53:27] 2025-05-29 01:35:15,995 | INFO     | zombie collector waiting for pid 8038
[2025-05-29 03:53:27] 2025-05-29 01:35:15,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 03:53:27] 2025-05-29 01:35:15,996 | INFO     | collected zombie processes
[2025-05-29 03:53:27] 2025-05-29 01:35:15,996 | INFO     | will attempt to kill all subprocesses of pid=8038
[2025-05-29 03:53:27] 2025-05-29 01:35:16,109 | INFO     | process IDs to be killed: [8038] (in reverse order)
[2025-05-29 03:53:27] 2025-05-29 01:35:16,869 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 03:53:27] 2025-05-29 01:35:16,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 03:53:27] 2025-05-29 01:35:16,872 | INFO     | did not find any defunct processes belonging to 8038
[2025-05-29 03:53:27] 2025-05-29 01:35:16,876 | INFO     | did not find any defunct processes belonging to 8038
[2025-05-29 03:53:27] 2025-05-29 01:35:16,876 | INFO     | ready for new job
[2025-05-29 03:53:27] 2025-05-29 01:35:16,876 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 03:53:27] 2025-05-29 01:35:16,878 | INFO     | **************************************
[2025-05-29 03:53:27] 2025-05-29 01:35:16,878 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 03:53:27] 2025-05-29 01:35:16,879 | INFO     | **************************************
[2025-05-29 03:53:27] 2025-05-29 01:35:16,879 | INFO     | 
[2025-05-29 03:53:27] 2025-05-29 01:35:16,879 | INFO     | pilot is running in a VM
[2025-05-29 03:53:27] 2025-05-29 01:35:16,879 | INFO     | architecture information:
[2025-05-29 03:53:27] 2025-05-29 01:35:16,886 | INFO     | executing command: cat /etc/os-release
[2025-05-29 03:53:27] 2025-05-29 01:35:17,050 | INFO     | cat /etc/os-release:
[2025-05-29 03:53:27] NAME="CentOS Linux"
[2025-05-29 03:53:27] VERSION="7 (Core)"
[2025-05-29 03:53:27] ID="centos"
[2025-05-29 03:53:27] ID_LIKE="rhel fedora"
[2025-05-29 03:53:27] VERSION_ID="7"
[2025-05-29 03:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 03:53:27] ANSI_COLOR="0;31"
[2025-05-29 03:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 03:53:27] HOME_URL="https://www.centos.org/"
[2025-05-29 03:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 03:53:27] 
[2025-05-29 03:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 03:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 03:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 03:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 03:53:27] 
[2025-05-29 03:53:27] 2025-05-29 01:35:17,050 | INFO     | **************************************
[2025-05-29 03:53:27] 2025-05-29 01:35:17,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-29 03:53:27] 2025-05-29 01:35:17,690 | INFO     | sufficient remaining disk space (496375955456 B)
[2025-05-29 03:53:27] 2025-05-29 01:35:17,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 03:53:27] 2025-05-29 01:35:17,691 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 03:53:27] 2025-05-29 01:35:17,691 | INFO     | update_server=False
[2025-05-29 03:53:27] 2025-05-29 01:35:17,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 03:53:27] 2025-05-29 01:35:17,692 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 03:53:27] 2025-05-29 01:35:17,693 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 03:53:27] 2025-05-29 01:35:17,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 03:53:27] 2025-05-29 01:35:17,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 03:53:27] 2025-05-29 01:35:17,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 03:53:27] 2025-05-29 01:35:17,851 | INFO     | all payload control threads have been joined
[2025-05-29 03:53:27] 2025-05-29 01:35:17,944 | INFO     | all data control threads have been joined
[2025-05-29 03:53:27] 2025-05-29 01:35:18,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 03:53:27] 2025-05-29 01:35:18,339 | INFO     | aborting loop
[2025-05-29 03:53:27] 2025-05-29 01:35:18,500 | INFO     | all job control threads have been joined
[2025-05-29 03:53:27] 2025-05-29 01:35:18,697 | INFO     | [job] retrieve thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:18,819 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:18,857 | INFO     | [payload] control thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:18,950 | INFO     | [data] control thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,158 | INFO     | [job] validate thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,220 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,345 | INFO     | [job] job monitor thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 03:53:27] 2025-05-29 01:35:19,505 | INFO     | [job] control thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,704 | INFO     | [data] copytool_out thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:19,959 | INFO     | [data] copytool_in thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:20,044 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:20,116 | INFO     | [payload] failed_post thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:20,237 | INFO     | [payload] validate_post thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:20,381 | INFO     | [job] queue monitor thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:21,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 03:53:27] 2025-05-29 01:35:25,155 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 03:53:27] 2025-05-29 01:35:25,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505653692224)>', '<ExcThread(monitor, started 140505065178880)>']
[2025-05-29 03:53:27] 2025-05-29 01:35:25,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 03:53:27] 2025-05-29 01:35:25,740 | INFO     | [monitor] control thread has ended
[2025-05-29 03:53:27] 2025-05-29 01:35:30,195 | INFO     | all workflow threads have been joined
[2025-05-29 03:53:27] 2025-05-29 01:35:30,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 03:53:27] 2025-05-29 01:35:30,196 | INFO     | traces error code: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:30,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 03:53:27] 2025-05-29 01:35:30,579 [wrapper] ==== pilot stdout END ====
[2025-05-29 03:53:27] 2025-05-29 01:35:30,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 03:53:27] 2025-05-29 01:35:30,761 [wrapper] pilotpid: 31898
[2025-05-29 03:53:27] 2025-05-29 01:35:30,849 [wrapper] Pilot exit status: 0
[2025-05-29 03:53:27] 2025-05-29 01:35:31,171 [wrapper] pandaids: 6668229815
[2025-05-29 03:53:27] 2025-05-29 01:35:31,968 [wrapper] cleanup supervisor_pilot  7406 31899
[2025-05-29 03:53:27] 2025-05-29 01:35:32,087 [wrapper] Test setup, not cleaning
[2025-05-29 03:53:27] 2025-05-29 01:35:32,200 [wrapper] apfmon messages muted
[2025-05-29 03:53:27] 2025-05-29 01:35:32,288 [wrapper] ==== wrapper stdout END ====
[2025-05-29 03:53:27] 2025-05-29 01:35:32,350 [wrapper] ==== wrapper stderr END ====
[2025-05-29 03:53:27]  *** Error codes and diagnostics ***
[2025-05-29 03:53:27]     "exeErrorCode": 0,
[2025-05-29 03:53:27]     "exeErrorDiag": "",
[2025-05-29 03:53:27]     "pilotErrorCode": 0,
[2025-05-29 03:53:27]     "pilotErrorDiag": "",
[2025-05-29 03:53:27]  *** Listing of results directory ***
[2025-05-29 03:53:27] total 421468
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc    495897 May 28 09:05 pilot3.tar.gz
[2025-05-29 03:53:27] -rwx------. 1 boinc boinc     37140 May 28 09:25 runpilot2-wrapper.sh
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc      5111 May 28 09:25 queuedata.json
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc       100 May 28 22:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 03:53:27] -rwxr-xr-x. 1 boinc boinc      7986 May 28 22:14 run_atlas
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc       105 May 28 22:14 job.xml
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc      6370 May 28 22:14 init_data.xml
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc 226828454 May 28 22:14 EVNT.44871834._003145.pool.root.1
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc     15093 May 28 22:14 start_atlas.sh
[2025-05-29 03:53:27] drwxrwx--x. 2 boinc boinc        68 May 28 22:14 shared
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc    508875 May 28 22:14 input.tar.gz
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc         0 May 28 22:14 boinc_lockfile
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc      2559 May 28 22:15 pandaJob.out
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc    993541 May 28 22:18 agis_schedconf.cvmfs.json
[2025-05-29 03:53:27] drwx------. 4 boinc boinc      4096 May 28 22:18 pilot3
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc 196838254 May 29 03:32 HITS.44871837._080573.pool.root.1
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc       531 May 29 03:32 boinc_task_state.xml
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc      1031 May 29 03:33 memory_monitor_summary.json
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc   1603667 May 29 03:33 agis_ddmendpoints.agis.ALL.json
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc    434753 May 29 03:33 log.44871837._080573.job.log.tgz.1
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc        95 May 29 03:35 pilot_heartbeat.json
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc      7691 May 29 03:35 heartbeat.json
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc      4539 May 29 03:35 pilotlog.txt
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc   1605259 May 29 03:35 log.44871837._080573.job.log.1
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc       357 May 29 03:35 output.list
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc       620 May 29 03:35 runtime_log
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc   2058240 May 29 03:35 result.tar.gz
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc      8659 May 29 03:35 runtime_log.err
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc       657 May 29 03:35 Cf6KDmoLQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmt8SKDmkEokkm.diag
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc      8192 May 29 03:53 boinc_mmap_file
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc        28 May 29 03:53 wrapper_checkpoint.txt
[2025-05-29 03:53:27] -rw-r--r--. 1 boinc boinc     20502 May 29 03:53 stderr.txt
[2025-05-29 03:53:27] HITS file was successfully produced:
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc 196838254 May 29 03:32 shared/HITS.pool.root.1
[2025-05-29 03:53:27]  *** Contents of shared directory: ***
[2025-05-29 03:53:27] total 416272
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc 226828454 May 28 22:14 ATLAS.root_0
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc     15093 May 28 22:14 start_atlas.sh
[2025-05-29 03:53:27] -rw-r--r--. 2 boinc boinc    508875 May 28 22:14 input.tar.gz
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc 196838254 May 29 03:32 HITS.pool.root.1
[2025-05-29 03:53:27] -rw-------. 1 boinc boinc   2058240 May 29 03:35 result.tar.gz
03:53:29 (19347): run_atlas exited; CPU time 70250.472318
03:53:29 (19347): called boinc_finish(0)

</stderr_txt>
]]>

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