Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:45:55 (3540): wrapper (7.7.26015): starting
09:45:55 (3540): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 09:45:55] Arguments: --nthreads 8
[2025-05-29 09:45:55] Threads: 8
[2025-05-29 09:45:55] Checking for CVMFS
[2025-05-29 09:45:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 09:45:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 09:45:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 09:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 09:45:56] 2.11.2.0 347 24248 89780 146547 2 114 14059585 25165824 4353 130560 0 13099351 99.814 14294846 2425 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 09:45:56] CVMFS is ok
[2025-05-29 09:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 09:45:56] Checking for apptainer binary...
[2025-05-29 09:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 09:45:56] Running /usr/bin/apptainer --version
[2025-05-29 09:45:56] apptainer version 1.3.2-1.el7
[2025-05-29 09:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 09:45:58] cg-vwn289.simple-grid.lan
[2025-05-29 09:45:58] apptainer works
[2025-05-29 09:45:58] Set ATHENA_PROC_NUMBER=8
[2025-05-29 09:45:58] Set ATHENA_CORE_NUMBER=8
[2025-05-29 09:45:58] Starting ATLAS job with PandaID=6668229909
[2025-05-29 09:45:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:56:29]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:56:29] 2025-05-29 12:55:21,053 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 14:56:29] 2025-05-29 12:55:21,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 14:56:29] 2025-05-29 12:55:21,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 14:56:29] 2025-05-29 12:55:21,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 14:56:29] 2025-05-29 12:55:21,060 | INFO     | fitting pss+swap vs Time
[2025-05-29 14:56:29] 2025-05-29 12:55:21,060 | INFO     | sum of square deviations: 8540720135.5
[2025-05-29 14:56:29] 2025-05-29 12:55:21,063 | INFO     | sum of deviations: 5872652054.500034
[2025-05-29 14:56:29] 2025-05-29 12:55:21,064 | INFO     | mean x: 1748514012.5
[2025-05-29 14:56:29] 2025-05-29 12:55:21,064 | INFO     | mean y: 2487533.413907285
[2025-05-29 14:56:29] 2025-05-29 12:55:21,064 | INFO     | -- intersect: -1199801529.4426267
[2025-05-29 14:56:29] 2025-05-29 12:55:21,064 | INFO     | intersect: -1199801529.4426267
[2025-05-29 14:56:29] 2025-05-29 12:55:21,064 | INFO     | chi2: 2.4259950574438043
[2025-05-29 14:56:29] 2025-05-29 12:55:21,065 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,068 | INFO     | sum of deviations: 25254644647.999992
[2025-05-29 14:56:29] 2025-05-29 12:55:21,068 | INFO     | mean x: 1748513860.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,068 | INFO     | mean y: 2494519.067340067
[2025-05-29 14:56:29] 2025-05-29 12:55:21,068 | INFO     | -- intersect: -5433355840.8481245
[2025-05-29 14:56:29] 2025-05-29 12:55:21,068 | INFO     | intersect: -5433355840.8481245
[2025-05-29 14:56:29] 2025-05-29 12:55:21,069 | INFO     | chi2: 1.6548100703328603
[2025-05-29 14:56:29] 2025-05-29 12:55:21,069 | INFO     | current chi2=1.6548100703328603 (change=31.788398939423963 %)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,070 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,072 | INFO     | sum of deviations: 24266123025.500008
[2025-05-29 14:56:29] 2025-05-29 12:55:21,073 | INFO     | mean x: 1748513707.5
[2025-05-29 14:56:29] 2025-05-29 12:55:21,073 | INFO     | mean y: 2494145.544520548
[2025-05-29 14:56:29] 2025-05-29 12:55:21,073 | INFO     | -- intersect: -5493516327.458933
[2025-05-29 14:56:29] 2025-05-29 12:55:21,073 | INFO     | intersect: -5493516327.458933
[2025-05-29 14:56:29] 2025-05-29 12:55:21,074 | INFO     | chi2: 1.655042508039973
[2025-05-29 14:56:29] 2025-05-29 12:55:21,074 | INFO     | current chi2=1.655042508039973 (change=-0.014046186404100913 %)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,074 | INFO     | right removable region: 291
[2025-05-29 14:56:29] 2025-05-29 12:55:21,074 | INFO     | sum of square deviations: 8123493708.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,077 | INFO     | sum of deviations: -42610117598.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,077 | INFO     | mean x: 1748514165.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,077 | INFO     | mean y: 2505132.077441077
[2025-05-29 14:56:29] 2025-05-29 12:55:21,078 | INFO     | -- intersect: 9173977022.188833
[2025-05-29 14:56:29] 2025-05-29 12:55:21,078 | INFO     | intersect: 9173977022.188833
[2025-05-29 14:56:29] 2025-05-29 12:55:21,078 | INFO     | chi2: 0.9448353418485533
[2025-05-29 14:56:29] 2025-05-29 12:55:21,078 | INFO     | current chi2=0.9448353418485533 (change=61.05369881321617 %)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,079 | INFO     | sum of square deviations: 7720081493.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,082 | INFO     | sum of deviations: -44352137907.999985
[2025-05-29 14:56:29] 2025-05-29 12:55:21,082 | INFO     | mean x: 1748514317.5
[2025-05-29 14:56:29] 2025-05-29 12:55:21,082 | INFO     | mean y: 2505778.493150685
[2025-05-29 14:56:29] 2025-05-29 12:55:21,082 | INFO     | -- intersect: 10047781623.597818
[2025-05-29 14:56:29] 2025-05-29 12:55:21,082 | INFO     | intersect: 10047781623.597818
[2025-05-29 14:56:29] 2025-05-29 12:55:21,083 | INFO     | chi2: 0.9320755807105118
[2025-05-29 14:56:29] 2025-05-29 12:55:21,083 | INFO     | current chi2=0.9320755807105118 (change=1.3504745824894016 %)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,083 | INFO     | left removable region: 20
[2025-05-29 14:56:29] 2025-05-29 12:55:21,083 | INFO     | sum of square deviations: 6171352920.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,086 | INFO     | sum of deviations: -7406973311.999993
[2025-05-29 14:56:29] 2025-05-29 12:55:21,086 | INFO     | mean x: 1748514287.0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,086 | INFO     | mean y: 2505707.988929889
[2025-05-29 14:56:29] 2025-05-29 12:55:21,086 | INFO     | -- intersect: 2101105290.179037
[2025-05-29 14:56:29] 2025-05-29 12:55:21,086 | INFO     | intersect: 2101105290.179037
[2025-05-29 14:56:29] 2025-05-29 12:55:21,087 | INFO     | chi2: 0.09005735822376226
[2025-05-29 14:56:29] 2025-05-29 12:55:21,087 | INFO     | -- intersect: 2101105290.179037
[2025-05-29 14:56:29] 2025-05-29 12:55:21,087 | INFO     | current memory leak: -1.20 B/s (using 271 data points, chi2=0.09)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | ..............................
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . Timing measurements:
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . get job = 0 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . initial setup = 2 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . payload setup = 13 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . stage-in = 0 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,088 | INFO     | . payload execution = 18410 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,089 | INFO     | . stage-out = 3 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,089 | INFO     | . log creation = 1 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,089 | INFO     | ..............................
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | 
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | job summary report
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | --------------------------------------------------
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | PanDA job id: 6668229909
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | task id: 44871837
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | errors: (none)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | pilot state: finished 
[2025-05-29 14:56:29] 2025-05-29 12:55:21,214 | INFO     | transexitcode: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | exeerrorcode: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | exeerrordiag: 
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | exitcode: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | exitmsg: OK
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | cpuconsumptiontime: 70070 s
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | nevents: 400
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | neventsw: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | pid: 15765
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | pgrp: 15765
[2025-05-29 14:56:29] 2025-05-29 12:55:21,215 | INFO     | corecount: 8
[2025-05-29 14:56:29] 2025-05-29 12:55:21,216 | INFO     | event service: False
[2025-05-29 14:56:29] 2025-05-29 12:55:21,216 | INFO     | sizes: {0: 2405012, 1: 2405211, 9: 2405417, 12: 2405445, 18427: 2437068, 18431: 2446009, 18432: 2446193, 18522: 2446363}
[2025-05-29 14:56:29] 2025-05-29 12:55:21,216 | INFO     | --------------------------------------------------
[2025-05-29 14:56:29] 2025-05-29 12:55:21,216 | INFO     | 
[2025-05-29 14:56:29] 2025-05-29 12:55:21,216 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:56:29] 2025-05-29 12:55:21,671 | INFO     | job 6668229909 has completed (purged errors)
[2025-05-29 14:56:29] 2025-05-29 12:55:21,671 | INFO     | overall cleanup function is called
[2025-05-29 14:56:29] 2025-05-29 12:55:22,683 | INFO     | --- collectZombieJob: --- 10, [15765]
[2025-05-29 14:56:29] 2025-05-29 12:55:22,683 | INFO     | zombie collector waiting for pid 15765
[2025-05-29 14:56:29] 2025-05-29 12:55:22,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:56:29] 2025-05-29 12:55:22,683 | INFO     | collected zombie processes
[2025-05-29 14:56:29] 2025-05-29 12:55:22,683 | INFO     | will attempt to kill all subprocesses of pid=15765
[2025-05-29 14:56:29] 2025-05-29 12:55:22,803 | INFO     | process IDs to be killed: [15765] (in reverse order)
[2025-05-29 14:56:29] 2025-05-29 12:55:23,549 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:56:29] 2025-05-29 12:55:23,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:56:29] 2025-05-29 12:55:23,553 | INFO     | did not find any defunct processes belonging to 15765
[2025-05-29 14:56:29] 2025-05-29 12:55:23,556 | INFO     | did not find any defunct processes belonging to 15765
[2025-05-29 14:56:29] 2025-05-29 12:55:23,556 | INFO     | ready for new job
[2025-05-29 14:56:29] 2025-05-29 12:55:23,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:56:29] 2025-05-29 12:55:23,558 | INFO     | **************************************
[2025-05-29 14:56:29] 2025-05-29 12:55:23,558 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:56:29] 2025-05-29 12:55:23,559 | INFO     | **************************************
[2025-05-29 14:56:29] 2025-05-29 12:55:23,559 | INFO     | 
[2025-05-29 14:56:29] 2025-05-29 12:55:23,559 | INFO     | pilot is running in a VM
[2025-05-29 14:56:29] 2025-05-29 12:55:23,559 | INFO     | architecture information:
[2025-05-29 14:56:29] 2025-05-29 12:55:23,564 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:56:29] 2025-05-29 12:55:23,800 | INFO     | cat /etc/os-release:
[2025-05-29 14:56:29] NAME="CentOS Linux"
[2025-05-29 14:56:29] VERSION="7 (Core)"
[2025-05-29 14:56:29] ID="centos"
[2025-05-29 14:56:29] ID_LIKE="rhel fedora"
[2025-05-29 14:56:29] VERSION_ID="7"
[2025-05-29 14:56:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:56:29] ANSI_COLOR="0;31"
[2025-05-29 14:56:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:56:29] HOME_URL="https://www.centos.org/"
[2025-05-29 14:56:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:56:29] 
[2025-05-29 14:56:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:56:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:56:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:56:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:56:29] 
[2025-05-29 14:56:29] 2025-05-29 12:55:23,800 | INFO     | **************************************
[2025-05-29 14:56:29] 2025-05-29 12:55:24,304 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-05-29 14:56:29] 2025-05-29 12:55:24,424 | INFO     | sufficient remaining disk space (496278437888 B)
[2025-05-29 14:56:29] 2025-05-29 12:55:24,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:56:29] 2025-05-29 12:55:24,425 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:56:29] 2025-05-29 12:55:24,425 | INFO     | update_server=False
[2025-05-29 14:56:29] 2025-05-29 12:55:24,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:56:29] 2025-05-29 12:55:24,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:56:29] 2025-05-29 12:55:24,429 | INFO     | aborting loop
[2025-05-29 14:56:29] 2025-05-29 12:55:24,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:56:29] 2025-05-29 12:55:24,741 | INFO     | all payload control threads have been joined
[2025-05-29 14:56:29] 2025-05-29 12:55:25,319 | INFO     | PID=7257 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-29 14:56:29] 2025-05-29 12:55:25,320 | INFO     | .. there are 9 such processes running
[2025-05-29 14:56:29] 2025-05-29 12:55:25,320 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:56:29] 2025-05-29 12:55:25,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:56:29] 2025-05-29 12:55:25,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:56:29] 2025-05-29 12:55:25,375 | INFO     | all data control threads have been joined
[2025-05-29 14:56:29] 2025-05-29 12:55:25,434 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:25,435 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:25,633 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:25,658 | INFO     | all job control threads have been joined
[2025-05-29 14:56:29] 2025-05-29 12:55:25,667 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:25,689 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:25,747 | INFO     | [payload] control thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,156 | INFO     | [job] validate thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:56:29] 2025-05-29 12:55:26,381 | INFO     | [data] control thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,437 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,664 | INFO     | [job] control thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,679 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,713 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,743 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:26,805 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:27,238 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:27,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:56:29] 2025-05-29 12:55:31,666 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:56:29] 2025-05-29 12:55:33,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123410368320)>', '<ExcThread(monitor, started 140122829874944)>']
[2025-05-29 14:56:29] 2025-05-29 12:55:33,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:56:29] 2025-05-29 12:55:33,368 | INFO     | [monitor] control thread has ended
[2025-05-29 14:56:29] 2025-05-29 12:55:38,059 | INFO     | all workflow threads have been joined
[2025-05-29 14:56:29] 2025-05-29 12:55:38,059 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:56:29] 2025-05-29 12:55:38,059 | INFO     | traces error code: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:38,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:56:29] 2025-05-29 12:55:38,409 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:56:29] 2025-05-29 12:55:38,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:56:29] 2025-05-29 12:55:38,480 [wrapper] pilotpid: 7257
[2025-05-29 14:56:29] 2025-05-29 12:55:38,512 [wrapper] Pilot exit status: 0
[2025-05-29 14:56:29] 2025-05-29 12:55:38,836 [wrapper] pandaids: 6668229909
[2025-05-29 14:56:29] 2025-05-29 12:55:39,318 [wrapper] cleanup supervisor_pilot 32505 7258
[2025-05-29 14:56:29] 2025-05-29 12:55:39,350 [wrapper] Test setup, not cleaning
[2025-05-29 14:56:29] 2025-05-29 12:55:39,356 [wrapper] apfmon messages muted
[2025-05-29 14:56:29] 2025-05-29 12:55:39,367 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:56:29] 2025-05-29 12:55:39,381 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:56:29]  *** Error codes and diagnostics ***
[2025-05-29 14:56:29]     "exeErrorCode": 0,
[2025-05-29 14:56:29]     "exeErrorDiag": "",
[2025-05-29 14:56:29]     "pilotErrorCode": 0,
[2025-05-29 14:56:29]     "pilotErrorDiag": "",
[2025-05-29 14:56:29]  *** Listing of results directory ***
[2025-05-29 14:56:29] total 412736
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc    495897 May 28 09:31 pilot3.tar.gz
[2025-05-29 14:56:29] -rwx------. 1 boinc boinc     37140 May 28 09:34 runpilot2-wrapper.sh
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc      5111 May 28 09:34 queuedata.json
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc       100 May 29 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:56:29] -rwxr-xr-x. 1 boinc boinc      7986 May 29 09:45 run_atlas
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc       105 May 29 09:45 job.xml
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc      6371 May 29 09:45 init_data.xml
[2025-05-29 14:56:29] -rw-r--r--. 2 boinc boinc 224211663 May 29 09:45 EVNT.44871834._003149.pool.root.1
[2025-05-29 14:56:29] -rw-r--r--. 2 boinc boinc     15093 May 29 09:45 start_atlas.sh
[2025-05-29 14:56:29] drwxrwx--x. 2 boinc boinc        68 May 29 09:45 shared
[2025-05-29 14:56:29] -rw-r--r--. 2 boinc boinc    508878 May 29 09:45 input.tar.gz
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc         0 May 29 09:45 boinc_lockfile
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc      2558 May 29 09:45 pandaJob.out
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc    993147 May 29 09:46 agis_schedconf.cvmfs.json
[2025-05-29 14:56:29] drwx------. 4 boinc boinc      4096 May 29 09:46 pilot3
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc 190582131 May 29 14:52 HITS.44871837._080667.pool.root.1
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc       531 May 29 14:52 boinc_task_state.xml
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc      1022 May 29 14:53 memory_monitor_summary.json
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc   1603667 May 29 14:53 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc    426345 May 29 14:53 log.44871837._080667.job.log.tgz.1
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc        95 May 29 14:54 pilot_heartbeat.json
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc      7690 May 29 14:55 heartbeat.json
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc      4807 May 29 14:55 pilotlog.txt
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc   1581549 May 29 14:55 log.44871837._080667.job.log.1
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc       357 May 29 14:55 output.list
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc       620 May 29 14:55 runtime_log
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc   2027520 May 29 14:55 result.tar.gz
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc      8659 May 29 14:55 runtime_log.err
[2025-05-29 14:56:29] -rw-------. 1 boinc boinc       657 May 29 14:55 OFlKDmxTQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm19SKDmDnrcQn.diag
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc      8192 May 29 14:56 boinc_mmap_file
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc        28 May 29 14:56 wrapper_checkpoint.txt
[2025-05-29 14:56:29] -rw-r--r--. 1 boinc boinc     20549 May 29 14:56 stderr.txt
[2025-05-29 14:56:30] HITS file was successfully produced:
[2025-05-29 14:56:30] -rw-------. 1 boinc boinc 190582131 May 29 14:52 shared/HITS.pool.root.1
[2025-05-29 14:56:30]  *** Contents of shared directory: ***
[2025-05-29 14:56:30] total 407572
[2025-05-29 14:56:30] -rw-r--r--. 2 boinc boinc 224211663 May 29 09:45 ATLAS.root_0
[2025-05-29 14:56:30] -rw-r--r--. 2 boinc boinc     15093 May 29 09:45 start_atlas.sh
[2025-05-29 14:56:30] -rw-r--r--. 2 boinc boinc    508878 May 29 09:45 input.tar.gz
[2025-05-29 14:56:30] -rw-------. 1 boinc boinc 190582131 May 29 14:52 HITS.pool.root.1
[2025-05-29 14:56:30] -rw-------. 1 boinc boinc   2027520 May 29 14:55 result.tar.gz
14:56:31 (3540): run_atlas exited; CPU time 70317.569819
14:56:31 (3540): called boinc_finish(0)

</stderr_txt>
]]>

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