Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:46 (3995284): wrapper (7.7.26015): starting
09:48:46 (3995284): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 09:48:46] Arguments: --nthreads 9
[2025-05-28 09:48:46] Threads: 9
[2025-05-28 09:48:46] Checking for CVMFS
[2025-05-28 09:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 09:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 09:48:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 09:48:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 09:48:48] 2.12.6.0 8433 21501 432512 146520 0 545 24589470 40960000 13377 16776704 1 63150452 99.607 64909879 23271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 09:48:48] CVMFS is ok
[2025-05-28 09:48:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 09:48:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 09:48:48] Further information can be found at the LHC@home message board.
[2025-05-28 09:48:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 09:48:48] Checking for apptainer binary...
[2025-05-28 09:48:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 09:48:48] Running /usr/bin/apptainer --version
[2025-05-28 09:48:48] apptainer version 1.4.1-1.el9
[2025-05-28 09:48:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 09:48:49] c6-5-7-1.aglt2.org
[2025-05-28 09:48:49] apptainer works
[2025-05-28 09:48:49] Set ATHENA_PROC_NUMBER=9
[2025-05-28 09:48:49] Set ATHENA_CORE_NUMBER=9
[2025-05-28 09:49:09] Starting ATLAS job with PandaID=6668210329
[2025-05-28 09:49:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 12:33:04]  *** The last 200 lines of the pilot log: ***
[2025-05-28 12:33:04] 2025-05-28 16:32:46,947 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 12:33:04] 2025-05-28 16:32:46,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 12:33:04] 2025-05-28 16:32:46,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 12:33:04] 2025-05-28 16:32:46,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 12:33:04] 2025-05-28 16:32:46,952 | INFO     | fitting pss+swap vs Time
[2025-05-28 12:33:04] 2025-05-28 16:32:46,953 | INFO     | sum of square deviations: 1223035903.5443068
[2025-05-28 12:33:04] 2025-05-28 16:32:46,954 | INFO     | sum of deviations: -408302576.2405071
[2025-05-28 12:33:04] 2025-05-28 16:32:46,954 | INFO     | mean x: 1748445154.658228
[2025-05-28 12:33:04] 2025-05-28 16:32:46,954 | INFO     | mean y: 2140819.569620253
[2025-05-28 12:33:04] 2025-05-28 16:32:46,954 | INFO     | -- intersect: 585847854.6561207
[2025-05-28 12:33:04] 2025-05-28 16:32:46,954 | INFO     | intersect: 585847854.6561207
[2025-05-28 12:33:04] 2025-05-28 16:32:46,955 | INFO     | chi2: 2.5583684554332757
[2025-05-28 12:33:04] 2025-05-28 16:32:46,955 | INFO     | sum of square deviations: 1110567000.9150355
[2025-05-28 12:33:04] 2025-05-28 16:32:46,956 | INFO     | sum of deviations: 8753033938.66668
[2025-05-28 12:33:04] 2025-05-28 16:32:46,956 | INFO     | mean x: 1748445002.1633987
[2025-05-28 12:33:04] 2025-05-28 16:32:46,956 | INFO     | mean y: 2152957.3333333335
[2025-05-28 12:33:04] 2025-05-28 16:32:46,956 | INFO     | -- intersect: -13778373954.792358
[2025-05-28 12:33:04] 2025-05-28 16:32:46,956 | INFO     | intersect: -13778373954.792358
[2025-05-28 12:33:04] 2025-05-28 16:32:46,957 | INFO     | chi2: 1.9092632400215335
[2025-05-28 12:33:04] 2025-05-28 16:32:46,957 | INFO     | current chi2=1.9092632400215335 (change=25.371842512880427 %)
[2025-05-28 12:33:04] 2025-05-28 16:32:46,957 | INFO     | sum of square deviations: 1005214510.7770271
[2025-05-28 12:33:04] 2025-05-28 16:32:46,958 | INFO     | sum of deviations: 8635400729.547295
[2025-05-28 12:33:04] 2025-05-28 16:32:46,958 | INFO     | mean x: 1748444849.6689188
[2025-05-28 12:33:04] 2025-05-28 16:32:46,958 | INFO     | mean y: 2152810.358108108
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | -- intersect: -15018046130.794352
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | intersect: -15018046130.794352
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | chi2: 1.9095103577755592
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | current chi2=1.9095103577755592 (change=-0.01294309495127359 %)
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | right removable region: 147
[2025-05-28 12:33:04] 2025-05-28 16:32:46,959 | INFO     | sum of square deviations: 1110551750.9150355
[2025-05-28 12:33:04] 2025-05-28 16:32:46,960 | INFO     | sum of deviations: -24293964410.267975
[2025-05-28 12:33:04] 2025-05-28 16:32:46,960 | INFO     | mean x: 1748445307.1633987
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | mean y: 2172861.1307189544
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | -- intersect: 38250429217.06295
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | intersect: 38250429217.06295
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | chi2: 0.9292083628443871
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | current chi2=0.9292083628443871 (change=63.67965056514818 %)
[2025-05-28 12:33:04] 2025-05-28 16:32:46,961 | INFO     | sum of square deviations: 1005193221.108108
[2025-05-28 12:33:04] 2025-05-28 16:32:46,962 | INFO     | sum of deviations: -22058597461.378376
[2025-05-28 12:33:04] 2025-05-28 16:32:46,962 | INFO     | mean x: 1748445459.662162
[2025-05-28 12:33:04] 2025-05-28 16:32:46,962 | INFO     | mean y: 2169502.9324324327
[2025-05-28 12:33:04] 2025-05-28 16:32:46,962 | INFO     | -- intersect: 38371165401.39793
[2025-05-28 12:33:04] 2025-05-28 16:32:46,963 | INFO     | intersect: 38371165401.39793
[2025-05-28 12:33:04] 2025-05-28 16:32:46,963 | INFO     | chi2: 0.8804405221698708
[2025-05-28 12:33:04] 2025-05-28 16:32:46,963 | INFO     | current chi2=0.8804405221698708 (change=5.248321326471252 %)
[2025-05-28 12:33:04] 2025-05-28 16:32:46,963 | INFO     | left removable region: 20
[2025-05-28 12:33:04] 2025-05-28 16:32:46,963 | INFO     | sum of square deviations: 635152762.8346472
[2025-05-28 12:33:04] 2025-05-28 16:32:46,964 | INFO     | sum of deviations: -3051279698.8267717
[2025-05-28 12:33:04] 2025-05-28 16:32:46,964 | INFO     | mean x: 1748445429.1811023
[2025-05-28 12:33:04] 2025-05-28 16:32:46,964 | INFO     | mean y: 2168471.905511811
[2025-05-28 12:33:04] 2025-05-28 16:32:46,964 | INFO     | -- intersect: 8401716351.941496
[2025-05-28 12:33:04] 2025-05-28 16:32:46,964 | INFO     | intersect: 8401716351.941496
[2025-05-28 12:33:04] 2025-05-28 16:32:46,965 | INFO     | chi2: 0.057226275525366896
[2025-05-28 12:33:04] 2025-05-28 16:32:46,965 | INFO     | -- intersect: 8401716351.941496
[2025-05-28 12:33:04] 2025-05-28 16:32:46,965 | INFO     | current memory leak: -4.80 B/s (using 127 data points, chi2=0.06)
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | ..............................
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . Timing measurements:
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . get job = 0 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . initial setup = 6 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . payload setup = 58 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . stage-in = 0 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . payload execution = 9611 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . stage-out = 2 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | . log creation = 0 s
[2025-05-28 12:33:04] 2025-05-28 16:32:46,966 | INFO     | ..............................
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | 
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | job summary report
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | --------------------------------------------------
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | PanDA job id: 6668210329
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | task id: 44871837
[2025-05-28 12:33:04] 2025-05-28 16:32:47,072 | INFO     | errors: (none)
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | pilot state: finished 
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | transexitcode: 0
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | exeerrorcode: 0
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | exeerrordiag: 
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | exitcode: 0
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | exitmsg: OK
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | cpuconsumptiontime: 48736 s
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | nevents: 400
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | neventsw: 0
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | pid: 4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | pgrp: 4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:47,073 | INFO     | corecount: 9
[2025-05-28 12:33:04] 2025-05-28 16:32:47,074 | INFO     | event service: False
[2025-05-28 12:33:04] 2025-05-28 16:32:47,074 | INFO     | sizes: {0: 2405063, 1: 2405262, 2: 2405290, 13: 2405290, 24: 2405346, 33: 2405580, 35: 2405764, 9674: 2433989, 9677: 2442930, 9679: 2442986, 9688: 2443156}
[2025-05-28 12:33:04] 2025-05-28 16:32:47,074 | INFO     | --------------------------------------------------
[2025-05-28 12:33:04] 2025-05-28 16:32:47,074 | INFO     | 
[2025-05-28 12:33:04] 2025-05-28 16:32:47,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-28 12:33:04] 2025-05-28 16:32:47,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | job 6668210329 has completed (purged errors)
[2025-05-28 12:33:04] 2025-05-28 16:32:47,099 | INFO     | overall cleanup function is called
[2025-05-28 12:33:04] 2025-05-28 16:32:48,108 | INFO     | --- collectZombieJob: --- 10, [4016089]
[2025-05-28 12:33:04] 2025-05-28 16:32:48,109 | INFO     | zombie collector waiting for pid 4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:48,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 12:33:04] 2025-05-28 16:32:48,109 | INFO     | collected zombie processes
[2025-05-28 12:33:04] 2025-05-28 16:32:48,109 | INFO     | will attempt to kill all subprocesses of pid=4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:49,598 | INFO     | process IDs to be killed: [4016089] (in reverse order)
[2025-05-28 12:33:04] 2025-05-28 16:32:49,855 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 12:33:04] 2025-05-28 16:32:49,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 12:33:04] 2025-05-28 16:32:49,883 | INFO     | did not find any defunct processes belonging to 4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:49,923 | INFO     | did not find any defunct processes belonging to 4016089
[2025-05-28 12:33:04] 2025-05-28 16:32:49,923 | INFO     | ready for new job
[2025-05-28 12:33:04] 2025-05-28 16:32:49,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 12:33:04] 2025-05-28 16:32:49,929 | INFO     | **************************************
[2025-05-28 12:33:04] 2025-05-28 16:32:49,930 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 12:33:04] 2025-05-28 16:32:49,930 | INFO     | **************************************
[2025-05-28 12:33:04] 2025-05-28 16:32:49,930 | INFO     | 
[2025-05-28 12:33:04] 2025-05-28 16:32:49,948 | INFO     | architecture information:
[2025-05-28 12:33:04] 2025-05-28 16:32:49,956 | INFO     | executing command: cat /etc/os-release
[2025-05-28 12:33:04] 2025-05-28 16:32:50,016 | INFO     | cat /etc/os-release:
[2025-05-28 12:33:04] NAME="CentOS Linux"
[2025-05-28 12:33:04] VERSION="7 (Core)"
[2025-05-28 12:33:04] ID="centos"
[2025-05-28 12:33:04] ID_LIKE="rhel fedora"
[2025-05-28 12:33:04] VERSION_ID="7"
[2025-05-28 12:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 12:33:04] ANSI_COLOR="0;31"
[2025-05-28 12:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 12:33:04] HOME_URL="https://www.centos.org/"
[2025-05-28 12:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 12:33:04] 
[2025-05-28 12:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 12:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 12:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 12:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 12:33:04] 
[2025-05-28 12:33:04] 2025-05-28 16:32:50,017 | INFO     | **************************************
[2025-05-28 12:33:04] 2025-05-28 16:32:50,233 | INFO     | PID=3999470 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-28 12:33:04] 2025-05-28 16:32:50,233 | INFO     | .. there are 17 such processes running
[2025-05-28 12:33:04] 2025-05-28 16:32:50,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-28 12:33:04] 2025-05-28 16:32:50,559 | INFO     | sufficient remaining disk space (74203529216 B)
[2025-05-28 12:33:04] 2025-05-28 16:32:50,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 12:33:04] 2025-05-28 16:32:50,560 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 12:33:04] 2025-05-28 16:32:50,560 | INFO     | update_server=False
[2025-05-28 12:33:04] 2025-05-28 16:32:50,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 12:33:04] 2025-05-28 16:32:50,560 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 12:33:04] 2025-05-28 16:32:50,561 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 12:33:04] 2025-05-28 16:32:50,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 12:33:04] 2025-05-28 16:32:50,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 12:33:04] 2025-05-28 16:32:50,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 12:33:04] 2025-05-28 16:32:50,889 | INFO     | aborting loop
[2025-05-28 12:33:04] 2025-05-28 16:32:51,566 | INFO     | [job] retrieve thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:51,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 12:33:04] 2025-05-28 16:32:51,597 | INFO     | all data control threads have been joined
[2025-05-28 12:33:04] 2025-05-28 16:32:51,767 | INFO     | all job control threads have been joined
[2025-05-28 12:33:04] 2025-05-28 16:32:51,832 | INFO     | [job] validate thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:51,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:51,895 | INFO     | [job] job monitor thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,080 | INFO     | all payload control threads have been joined
[2025-05-28 12:33:04] 2025-05-28 16:32:52,108 | INFO     | [payload] validate_post thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 12:33:04] 2025-05-28 16:32:52,181 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,228 | INFO     | [data] copytool_in thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,602 | INFO     | [data] control thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,617 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,773 | INFO     | [job] control thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,864 | INFO     | [payload] failed_post thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:52,881 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:53,087 | INFO     | [payload] control thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:53,163 | INFO     | [job] queue monitor thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:53,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 12:33:04] 2025-05-28 16:32:53,603 | INFO     | [data] copytool_out thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:57,368 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 12:33:04] 2025-05-28 16:32:58,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278473414464)>', '<ExcThread(monitor, started 140277960390400)>']
[2025-05-28 12:33:04] 2025-05-28 16:32:58,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 12:33:04] 2025-05-28 16:32:58,614 | INFO     | [monitor] control thread has ended
[2025-05-28 12:33:04] 2025-05-28 16:33:03,256 | INFO     | all workflow threads have been joined
[2025-05-28 12:33:04] 2025-05-28 16:33:03,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 12:33:04] 2025-05-28 16:33:03,257 | INFO     | traces error code: 0
[2025-05-28 12:33:04] 2025-05-28 16:33:03,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 12:33:04] 2025-05-28 16:33:04,137 [wrapper] ==== pilot stdout END ====
[2025-05-28 12:33:04] 2025-05-28 16:33:04,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 12:33:04] 2025-05-28 16:33:04,142 [wrapper] pilotpid: 3999470
[2025-05-28 12:33:04] 2025-05-28 16:33:04,145 [wrapper] Pilot exit status: 0
[2025-05-28 12:33:04] 2025-05-28 16:33:04,157 [wrapper] pandaids: 6668210329
[2025-05-28 12:33:04] 2025-05-28 16:33:04,217 [wrapper] cleanup supervisor_pilot  340164 3999471
[2025-05-28 12:33:04] 2025-05-28 16:33:04,220 [wrapper] Test setup, not cleaning
[2025-05-28 12:33:04] 2025-05-28 16:33:04,222 [wrapper] apfmon messages muted
[2025-05-28 12:33:04] 2025-05-28 16:33:04,225 [wrapper] ==== wrapper stdout END ====
[2025-05-28 12:33:04] 2025-05-28 16:33:04,228 [wrapper] ==== wrapper stderr END ====
[2025-05-28 12:33:04]  *** Error codes and diagnostics ***
[2025-05-28 12:33:04]     "exeErrorCode": 0,
[2025-05-28 12:33:04]     "exeErrorDiag": "",
[2025-05-28 12:33:04]     "pilotErrorCode": 0,
[2025-05-28 12:33:04]     "pilotErrorDiag": "",
[2025-05-28 12:33:04]  *** Listing of results directory ***
[2025-05-28 12:33:04] total 415160
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas    495897 May 28 02:52 pilot3.tar.gz
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas      5111 May 28 02:58 queuedata.json
[2025-05-28 12:33:04] -rwx------. 1 boincer umatlas     37140 May 28 02:58 runpilot2-wrapper.sh
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas       100 May 28 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 12:33:04] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 09:48 run_atlas
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas       105 May 28 09:48 job.xml
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas 225219474 May 28 09:48 EVNT.44871834._003137.pool.root.1
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas    508873 May 28 09:48 input.tar.gz
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas     15093 May 28 09:48 start_atlas.sh
[2025-05-28 12:33:04] drwxrwx--x. 2 boincer umatlas      4096 May 28 09:48 shared
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas         0 May 28 09:48 boinc_lockfile
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas      2559 May 28 09:48 pandaJob.out
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas    991925 May 28 09:50 agis_schedconf.cvmfs.json
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas   1603667 May 28 09:50 agis_ddmendpoints.agis.ALL.json
[2025-05-28 12:33:04] drwx------. 4 boincer umatlas      4096 May 28 09:50 pilot3
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas      6838 May 28 12:28 init_data.xml
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas        95 May 28 12:31 pilot_heartbeat.json
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas 193646378 May 28 12:31 HITS.44871837._080360.pool.root.1
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas       530 May 28 12:32 boinc_task_state.xml
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas      1052 May 28 12:32 memory_monitor_summary.json
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas    381336 May 28 12:32 log.44871837._080360.job.log.tgz.1
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas      7718 May 28 12:32 heartbeat.json
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas        27 May 28 12:33 wrapper_checkpoint.txt
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas      8192 May 28 12:33 boinc_mmap_file
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas      4872 May 28 12:33 pilotlog.txt
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas    823841 May 28 12:33 log.44871837._080360.job.log.1
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas       357 May 28 12:33 output.list
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas       620 May 28 12:33 runtime_log
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas   1228800 May 28 12:33 result.tar.gz
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas      8659 May 28 12:33 runtime_log.err
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas       653 May 28 12:33 KejLDmZvPe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeUbKDm5i7T4n.diag
[2025-05-28 12:33:04] -rw-r--r--. 1 boincer umatlas     21047 May 28 12:33 stderr.txt
[2025-05-28 12:33:04] HITS file was successfully produced:
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas 193646378 May 28 12:31 shared/HITS.pool.root.1
[2025-05-28 12:33:04]  *** Contents of shared directory: ***
[2025-05-28 12:33:04] total 410772
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas 225219474 May 28 09:48 ATLAS.root_0
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas    508873 May 28 09:48 input.tar.gz
[2025-05-28 12:33:04] -rw-r--r--. 2 boincer umatlas     15093 May 28 09:48 start_atlas.sh
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas 193646378 May 28 12:31 HITS.pool.root.1
[2025-05-28 12:33:04] -rw-------. 1 boincer umatlas   1228800 May 28 12:33 result.tar.gz
12:33:05 (3995284): run_atlas exited; CPU time 48897.669716
12:33:05 (3995284): called boinc_finish(0)

</stderr_txt>
]]>

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