Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-31 02:36:05 (7444): Detected: vboxwrapper 26206
2025-05-31 02:36:05 (7444): Detected: BOINC client v7.16.20
2025-05-31 02:36:06 (7444): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-31 02:36:06 (7444): Successfully copied 'init_data.xml' to the shared directory.
2025-05-31 02:36:07 (7444): Create VM. (boinc_6bf719470845b2aa, slot#2)
2025-05-31 02:36:07 (7444): Setting Memory Size for VM. (4800MB)
2025-05-31 02:36:07 (7444): Setting CPU Count for VM. (8)
2025-05-31 02:36:08 (7444): Setting Chipset Options for VM.
2025-05-31 02:36:08 (7444): Setting Graphics Controller Options for VM.
2025-05-31 02:36:08 (7444): Setting Boot Options for VM.
2025-05-31 02:36:08 (7444): Setting Network Configuration for NAT.
2025-05-31 02:36:09 (7444): Enabling VM Network Access.
2025-05-31 02:36:09 (7444): Disabling USB Support for VM.
2025-05-31 02:36:09 (7444): Disabling COM Port Support for VM.
2025-05-31 02:36:09 (7444): Disabling LPT Port Support for VM.
2025-05-31 02:36:10 (7444): Disabling Audio Support for VM.
2025-05-31 02:36:10 (7444): Disabling Clipboard Support for VM.
2025-05-31 02:36:10 (7444): Disabling Drag and Drop Support for VM.
2025-05-31 02:36:10 (7444): Adding storage controller(s) to VM.
2025-05-31 02:36:11 (7444): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-31 02:36:11 (7444): Adding VirtualBox Guest Additions to VM.
2025-05-31 02:36:11 (7444): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-31 02:36:12 (7444): forwarding host port 54831 to guest port 80
2025-05-31 02:36:12 (7444): Enabling remote desktop for VM.
2025-05-31 02:36:12 (7444): Required extension pack not installed, remote desktop not enabled.
2025-05-31 02:36:12 (7444): Enabling shared directory for VM.
2025-05-31 02:36:13 (7444): Starting VM using VBoxManage interface. (boinc_6bf719470845b2aa, slot#2)
2025-05-31 02:36:17 (7444): Successfully started VM. (PID = '8792')
2025-05-31 02:36:17 (7444): Reporting VM Process ID to BOINC.
2025-05-31 02:36:17 (7444): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-31 02:36:17 (7444): Guest Log: CPUID EDX: 0x178bfbff
2025-05-31 02:36:17 (7444): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-31 02:36:17 (7444): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-31 02:36:17 (7444): Detected: Web Application Enabled (http://localhost:54831)
2025-05-31 02:36:17 (7444): Preference change detected
2025-05-31 02:36:17 (7444): Setting CPU throttle for VM. (80%)
2025-05-31 02:36:18 (7444): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-31 02:36:19 (7444): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-31 02:36:19 (7444): Guest Log: BIOS: Booting from Hard Disk...
2025-05-31 02:36:22 (7444): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-31 02:36:22 (7444): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-31 02:36:22 (7444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-31 02:36:27 (7444): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-31 02:36:27 (7444): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-31 02:36:32 (7444): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000107 main     Log opened 2025-05-31T02:36:31.060728000Z
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000196 main     OS Product: Linux
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000227 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000251 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000273 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000273 main     Process ID: 1365
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000274 main     Package type: LINUX_64BITS_GENERIC
2025-05-31 02:36:32 (7444): Guest Log: 00:00:00.000901 main     5.2.32 r132073 started. Verbose level = 0
2025-05-31 02:36:32 (7444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-31 02:36:32 (7444): Guest Log: [INFO] Mounting shared directory
2025-05-31 02:36:32 (7444): Guest Log: [INFO] Checking for init_data.xml
2025-05-31 02:36:38 (7444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-31 02:36:38 (7444): Guest Log: [INFO] Detected branch: prod
2025-05-31 02:36:38 (7444): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-31 02:36:38 (7444): Guest Log: Copying input files
2025-05-31 02:36:39 (7444): Guest Log: Copied input files into RunAtlas.
2025-05-31 02:36:39 (7444): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-31 02:36:39 (7444): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-31 02:36:39 (7444): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-31 02:36:39 (7444): Guest Log: Further information can be found at the LHC@home message board.
2025-05-31 02:36:42 (7444): Guest Log: 00:00:10.003525 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 670 495 000ns (GuestNow=1 748 651 802 392 306 000 ns GuestLast=1 748 658 991 062 801 000 ns fSetTimeLastLoop=true )
2025-05-31 02:36:48 (7444): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-31 02:36:48 (7444): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-31 02:36:48 (7444): Guest Log: 2.6.3.0 1643 0 32104 146617 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-31 02:36:48 (7444): Guest Log: copied the webapp to /var/www
2025-05-31 02:36:48 (7444): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-31 02:36:48 (7444): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-31 02:36:48 (7444): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-31 02:36:49 (7444): Guest Log:  *** Starting ATLAS job. (PandaID=6667923364 taskID=44871837) ***
2025-05-31 04:16:22 (7444): Status Report: Elapsed Time: '6000.000000'
2025-05-31 04:16:22 (7444): Status Report: CPU Time: '37220.390625'
2025-05-31 05:14:45 (7444): Guest Log:  *** Job finished ***
2025-05-31 05:14:45 (7444): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:32,249 | INFO     | [data] queue_monitor thread has finished
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:36,868 | INFO     | job.realtimelogging is not enabled
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:37,883 | INFO     | [payload] run_realtimelog thread has finished
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:38,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125026158400)>', '<ExcThread(monitor, started 140123702290176)>']
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:39,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:39,257 | INFO     | [monitor] control thread has ended
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,766 | INFO     | all workflow threads have been joined
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,767 | INFO     | end of generic workflow (traces error code: 0)
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,767 | INFO     | traces error code: 0
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,886 [wrapper] ==== pilot stdout END ====
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,892 [wrapper] ==== wrapper stdout RESUME ====
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,897 [wrapper] pilotpid: 6013
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:43,902 [wrapper] Pilot exit status: 0
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,841 [wrapper] pandaids: 6667923364
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,871 [wrapper] cleanup supervisor_pilot  6697 6014
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,875 [wrapper] Test setup, not cleaning
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,880 [wrapper] apfmon messages muted
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,885 [wrapper] ==== wrapper stdout END ====
2025-05-31 05:14:45 (7444): Guest Log: 2025-05-31 03:14:44,890 [wrapper] ==== wrapper stderr END ====
2025-05-31 05:14:45 (7444): Guest Log:  *** Error codes and diagnostics ***
2025-05-31 05:14:45 (7444): Guest Log:     "exeErrorCode": 0,
2025-05-31 05:14:45 (7444): Guest Log:     "exeErrorDiag": "",
2025-05-31 05:14:45 (7444): Guest Log:     "pilotErrorCode": 0,
2025-05-31 05:14:45 (7444): Guest Log:     "pilotErrorDiag": "",
2025-05-31 05:14:45 (7444): Guest Log:  *** Listing of results directory ***
2025-05-31 05:14:45 (7444): Guest Log: total 200672
2025-05-31 05:14:45 (7444): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 02:39 pilot3.tar.gz
2025-05-31 05:14:45 (7444): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 03:05 runpilot2-wrapper.sh
2025-05-31 05:14:45 (7444): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 03:05 queuedata.json
2025-05-31 05:14:45 (7444): Guest Log: -rwxr-xr-x. 1 atlas atlas      9079 May 31 00:36 init_data.xml
2025-05-31 05:14:45 (7444): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 May 31 00:36 input.tar.gz
2025-05-31 05:14:45 (7444): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 31 00:36 start_atlas.sh
2025-05-31 05:14:45 (7444): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 31 00:36 EVNT.44871834._003046.pool.root.1 -> /data/./ATLAS.root_0
2025-05-31 05:14:45 (7444): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 31 00:36 pandaJob.out
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas    987388 May 31 00:39 agis_schedconf.cvmfs.json
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas   1603667 May 31 00:39 agis_ddmendpoints.agis.ALL.json
2025-05-31 05:14:45 (7444): Guest Log: drwx------. 4 atlas atlas      4096 May 31 00:39 pilot3
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas 199486275 May 31 03:13 HITS.44871837._077916.pool.root.1
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas      1040 May 31 03:14 memory_monitor_summary.json
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas    325503 May 31 03:14 log.44871837._077916.job.log.tgz.1
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas        95 May 31 03:14 pilot_heartbeat.json
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas      7710 May 31 03:14 heartbeat.json
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas      4608 May 31 03:14 pilotlog.txt
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas    787380 May 31 03:14 log.44871837._077916.job.log.1
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas       357 May 31 03:14 output.list
2025-05-31 05:14:45 (7444): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 31 03:14 runtime_log
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas   1136640 May 31 03:14 result.tar.gz
2025-05-31 05:14:45 (7444): Guest Log: -rw-r--r--. 1 atlas atlas      8631 May 31 03:14 runtime_log.err
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas       666 May 31 03:14 mepKDmeHMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLqSKDm7qDaxn.diag
2025-05-31 05:14:45 (7444): Guest Log: Looking for outputfile HITS.44871837._077916.pool.root.1
2025-05-31 05:14:45 (7444): Guest Log: HITS file was successfully produced
2025-05-31 05:14:45 (7444): Guest Log: -rw-------. 1 atlas atlas 199486275 May 31 03:13 /home/atlas/RunAtlas/HITS.44871837._077916.pool.root.1
2025-05-31 05:14:46 (7444): Guest Log: Successfully finished the ATLAS job!
2025-05-31 05:14:46 (7444): Guest Log: Copying the results back to the shared directory!
2025-05-31 05:14:46 (7444): Guest Log:  *** Contents of shared directory: ***
2025-05-31 05:14:46 (7444): Guest Log: total 415856
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root 224668063 May 31 00:36 ATLAS.root_0
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root 199486275 May 31 03:14 HITS.pool.root.1
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root      9079 May 31 00:36 init_data.xml
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root    508877 May 28 12:11 input.tar.gz
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root   1136640 May 31  2025 result.tar.gz
2025-05-31 05:14:46 (7444): Guest Log: -rwxrwxrwx. 1 root root     15093 May 28 12:11 start_atlas.sh
2025-05-31 05:14:46 (7444): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-31 05:14:46 (7444): VM Completion File Detected.
2025-05-31 05:14:46 (7444): Powering off VM.
2025-05-31 05:14:47 (7444): Successfully stopped VM.
2025-05-31 05:14:47 (7444): Deregistering VM. (boinc_6bf719470845b2aa, slot#2)
2025-05-31 05:14:47 (7444): Removing network bandwidth throttle group from VM.
2025-05-31 05:14:47 (7444): Removing VM from VirtualBox.
05:14:52 (7444): called boinc_finish(0)

</stderr_txt>
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