Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:24 (3814384): wrapper (7.7.26015): starting
08:58:24 (3814384): wrapper: running run_atlas (--nthreads 9)
[2025-05-28 08:58:24] Arguments: --nthreads 9
[2025-05-28 08:58:24] Threads: 9
[2025-05-28 08:58:24] Checking for CVMFS
[2025-05-28 08:58:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 08:58:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 08:58:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 08:58:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 08:58:25] 2.12.6.0 8433 21451 432508 146518 2 543 24532232 40960000 13531 16776704 1 62987243 99.606 64888667 23268 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-28 08:58:25] CVMFS is ok
[2025-05-28 08:58:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 08:58:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 08:58:25] Further information can be found at the LHC@home message board.
[2025-05-28 08:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 08:58:25] Checking for apptainer binary...
[2025-05-28 08:58:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 08:58:25] Running /usr/bin/apptainer --version
[2025-05-28 08:58:26] apptainer version 1.4.1-1.el9
[2025-05-28 08:58:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 08:58:26] c6-5-7-1.aglt2.org
[2025-05-28 08:58:26] apptainer works
[2025-05-28 08:58:26] Set ATHENA_PROC_NUMBER=9
[2025-05-28 08:58:26] Set ATHENA_CORE_NUMBER=9
[2025-05-28 08:58:26] Starting ATLAS job with PandaID=6668051191
[2025-05-28 08:58:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 13:21:30]  *** The last 200 lines of the pilot log: ***
[2025-05-28 13:21:30] 2025-05-28 17:21:18,164 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 13:21:30] 2025-05-28 17:21:18,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 13:21:30] 2025-05-28 17:21:18,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 13:21:30] 2025-05-28 17:21:18,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 13:21:30] 2025-05-28 17:21:18,170 | INFO     | fitting pss+swap vs Time
[2025-05-28 13:21:30] 2025-05-28 17:21:18,171 | INFO     | sum of square deviations: 5202313538.9375
[2025-05-28 13:21:30] 2025-05-28 17:21:18,172 | INFO     | sum of deviations: 90846445920.54688
[2025-05-28 13:21:30] 2025-05-28 17:21:18,173 | INFO     | mean x: 1748445056.640625
[2025-05-28 13:21:30] 2025-05-28 17:21:18,173 | INFO     | mean y: 2139621.33203125
[2025-05-28 13:21:30] 2025-05-28 17:21:18,173 | INFO     | -- intersect: -30530433645.21332
[2025-05-28 13:21:30] 2025-05-28 17:21:18,173 | INFO     | intersect: -30530433645.21332
[2025-05-28 13:21:30] 2025-05-28 17:21:18,173 | INFO     | chi2: 3.7639827346525894
[2025-05-28 13:21:30] 2025-05-28 17:21:18,174 | INFO     | sum of square deviations: 4903401216.119503
[2025-05-28 13:21:30] 2025-05-28 17:21:18,175 | INFO     | sum of deviations: 107017286852.00005
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | mean x: 1748444904.1394422
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | mean y: 2147744.0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | -- intersect: -38157860300.23021
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | intersect: -38157860300.23021
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | chi2: 2.926311289943209
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | current chi2=2.926311289943209 (change=22.254922611559117 %)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,176 | INFO     | right removable region: 250
[2025-05-28 13:21:30] 2025-05-28 17:21:18,177 | INFO     | sum of square deviations: 4903394628.8366785
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | sum of deviations: 39390298246.19119
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | mean x: 1748445209.1434262
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | mean y: 2165810.661354582
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | -- intersect: -14043568515.972559
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | intersect: -14043568515.972559
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | chi2: 1.6543883783737665
[2025-05-28 13:21:30] 2025-05-28 17:21:18,179 | INFO     | current chi2=1.6543883783737665 (change=56.04686591298979 %)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,180 | INFO     | sum of square deviations: 4616150356.231727
[2025-05-28 13:21:30] 2025-05-28 17:21:18,181 | INFO     | sum of deviations: 8491784423.573189
[2025-05-28 13:21:30] 2025-05-28 17:21:18,182 | INFO     | mean x: 1748445361.6463416
[2025-05-28 13:21:30] 2025-05-28 17:21:18,182 | INFO     | mean y: 2182195.9146341463
[2025-05-28 13:21:30] 2025-05-28 17:21:18,182 | INFO     | -- intersect: -3214225403.862401
[2025-05-28 13:21:30] 2025-05-28 17:21:18,182 | INFO     | intersect: -3214225403.862401
[2025-05-28 13:21:30] 2025-05-28 17:21:18,182 | INFO     | chi2: 0.9844101543777559
[2025-05-28 13:21:30] 2025-05-28 17:21:18,183 | INFO     | current chi2=0.9844101543777559 (change=40.49703399479794 %)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,183 | INFO     | sum of square deviations: 4340348158.622393
[2025-05-28 13:21:30] 2025-05-28 17:21:18,185 | INFO     | sum of deviations: 2085248530.9626446
[2025-05-28 13:21:30] 2025-05-28 17:21:18,185 | INFO     | mean x: 1748445514.1493776
[2025-05-28 13:21:30] 2025-05-28 17:21:18,185 | INFO     | mean y: 2185696.7510373443
[2025-05-28 13:21:30] 2025-05-28 17:21:18,185 | INFO     | -- intersect: -837826050.3723596
[2025-05-28 13:21:30] 2025-05-28 17:21:18,185 | INFO     | intersect: -837826050.3723596
[2025-05-28 13:21:30] 2025-05-28 17:21:18,186 | INFO     | chi2: 0.9205375816564343
[2025-05-28 13:21:30] 2025-05-28 17:21:18,186 | INFO     | current chi2=0.9205375816564343 (change=6.4884105915887655 %)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,186 | INFO     | left removable region: 30
[2025-05-28 13:21:30] 2025-05-28 17:21:18,186 | INFO     | sum of square deviations: 3301719700.0500016
[2025-05-28 13:21:30] 2025-05-28 17:21:18,187 | INFO     | sum of deviations: 10370519480.350004
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | mean x: 1748445788.65
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | mean y: 2200757.1863636365
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | -- intersect: -5489571034.118681
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | intersect: -5489571034.118681
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | chi2: 0.05220764787557646
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | -- intersect: -5489571034.118681
[2025-05-28 13:21:30] 2025-05-28 17:21:18,188 | INFO     | current memory leak: 3.14 B/s (using 220 data points, chi2=0.05)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,189 | INFO     | ..............................
[2025-05-28 13:21:30] 2025-05-28 17:21:18,189 | INFO     | . Timing measurements:
[2025-05-28 13:21:30] 2025-05-28 17:21:18,189 | INFO     | . get job = 0 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . initial setup = 5 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . payload setup = 43 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . stage-in = 0 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . payload execution = 15610 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . stage-out = 3 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | . log creation = 0 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,190 | INFO     | ..............................
[2025-05-28 13:21:30] 2025-05-28 17:21:18,302 | INFO     | 
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | job summary report
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | --------------------------------------------------
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | PanDA job id: 6668051191
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | task id: 44871837
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | errors: (none)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | pilot state: finished 
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | transexitcode: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | exeerrorcode: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | exeerrordiag: 
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | exitcode: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | exitmsg: OK
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | cpuconsumptiontime: 49363 s
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | nevents: 400
[2025-05-28 13:21:30] 2025-05-28 17:21:18,304 | INFO     | neventsw: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | pid: 3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | pgrp: 3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | corecount: 9
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | event service: False
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405262, 13: 2405290, 22: 2405552, 24: 2405580, 15657: 2437118, 15658: 2437117, 15661: 2446114, 15662: 2446170, 15670: 2446340}
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | --------------------------------------------------
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | 
[2025-05-28 13:21:30] 2025-05-28 17:21:18,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-28 13:21:30] 2025-05-28 17:21:18,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 13:21:30] 2025-05-28 17:21:18,379 | INFO     | job 6668051191 has completed (purged errors)
[2025-05-28 13:21:30] 2025-05-28 17:21:18,379 | INFO     | overall cleanup function is called
[2025-05-28 13:21:30] 2025-05-28 17:21:19,395 | INFO     | --- collectZombieJob: --- 10, [3829405]
[2025-05-28 13:21:30] 2025-05-28 17:21:19,396 | INFO     | zombie collector waiting for pid 3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:19,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 13:21:30] 2025-05-28 17:21:19,396 | INFO     | collected zombie processes
[2025-05-28 13:21:30] 2025-05-28 17:21:19,396 | INFO     | will attempt to kill all subprocesses of pid=3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:19,916 | INFO     | process IDs to be killed: [3829405] (in reverse order)
[2025-05-28 13:21:30] 2025-05-28 17:21:20,018 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 13:21:30] 2025-05-28 17:21:20,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 13:21:30] 2025-05-28 17:21:20,038 | INFO     | did not find any defunct processes belonging to 3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:20,049 | INFO     | did not find any defunct processes belonging to 3829405
[2025-05-28 13:21:30] 2025-05-28 17:21:20,050 | INFO     | ready for new job
[2025-05-28 13:21:30] 2025-05-28 17:21:20,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 13:21:30] 2025-05-28 17:21:20,052 | INFO     | **************************************
[2025-05-28 13:21:30] 2025-05-28 17:21:20,053 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 13:21:30] 2025-05-28 17:21:20,053 | INFO     | **************************************
[2025-05-28 13:21:30] 2025-05-28 17:21:20,053 | INFO     | 
[2025-05-28 13:21:30] 2025-05-28 17:21:20,068 | INFO     | architecture information:
[2025-05-28 13:21:30] 2025-05-28 17:21:20,070 | INFO     | executing command: cat /etc/os-release
[2025-05-28 13:21:30] 2025-05-28 17:21:20,096 | INFO     | cat /etc/os-release:
[2025-05-28 13:21:30] NAME="CentOS Linux"
[2025-05-28 13:21:30] VERSION="7 (Core)"
[2025-05-28 13:21:30] ID="centos"
[2025-05-28 13:21:30] ID_LIKE="rhel fedora"
[2025-05-28 13:21:30] VERSION_ID="7"
[2025-05-28 13:21:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 13:21:30] ANSI_COLOR="0;31"
[2025-05-28 13:21:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 13:21:30] HOME_URL="https://www.centos.org/"
[2025-05-28 13:21:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 13:21:30] 
[2025-05-28 13:21:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 13:21:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 13:21:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 13:21:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 13:21:30] 
[2025-05-28 13:21:30] 2025-05-28 17:21:20,096 | INFO     | **************************************
[2025-05-28 13:21:30] 2025-05-28 17:21:20,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-28 13:21:30] 2025-05-28 17:21:20,642 | INFO     | sufficient remaining disk space (74248617984 B)
[2025-05-28 13:21:30] 2025-05-28 17:21:20,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 13:21:30] 2025-05-28 17:21:20,642 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 13:21:30] 2025-05-28 17:21:20,643 | INFO     | update_server=False
[2025-05-28 13:21:30] 2025-05-28 17:21:20,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 13:21:30] 2025-05-28 17:21:20,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 13:21:30] 2025-05-28 17:21:20,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 13:21:30] 2025-05-28 17:21:20,645 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 13:21:30] 2025-05-28 17:21:20,645 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 13:21:30] 2025-05-28 17:21:20,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 13:21:30] 2025-05-28 17:21:20,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 13:21:30] 2025-05-28 17:21:20,875 | INFO     | all payload control threads have been joined
[2025-05-28 13:21:30] 2025-05-28 17:21:21,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 13:21:30] 2025-05-28 17:21:21,015 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 13:21:30] 2025-05-28 17:21:21,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 13:21:30] 2025-05-28 17:21:21,015 | INFO     | will abort loop
[2025-05-28 13:21:30] 2025-05-28 17:21:21,603 | INFO     | all job control threads have been joined
[2025-05-28 13:21:30] 2025-05-28 17:21:21,650 | INFO     | [job] retrieve thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:21,684 | INFO     | [payload] failed_post thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:21,697 | INFO     | all data control threads have been joined
[2025-05-28 13:21:30] 2025-05-28 17:21:21,845 | INFO     | [data] copytool_in thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:21,882 | INFO     | [payload] control thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:21,907 | INFO     | [job] validate thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,037 | INFO     | [job] job monitor thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,213 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,238 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,609 | INFO     | [job] control thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,652 | INFO     | [data] copytool_out thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:22,703 | INFO     | [data] control thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:23,038 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:23,275 | INFO     | [payload] validate_post thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:23,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 13:21:30] 2025-05-28 17:21:24,324 | INFO     | [job] queue monitor thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:24,655 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 13:21:30] 2025-05-28 17:21:25,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629744736064)>', '<ExcThread(monitor, started 139629118355200)>']
[2025-05-28 13:21:30] 2025-05-28 17:21:25,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 13:21:30] 2025-05-28 17:21:25,674 | INFO     | [monitor] control thread has ended
[2025-05-28 13:21:30] 2025-05-28 17:21:30,298 | INFO     | all workflow threads have been joined
[2025-05-28 13:21:30] 2025-05-28 17:21:30,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 13:21:30] 2025-05-28 17:21:30,299 | INFO     | traces error code: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:30,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 13:21:30] 2025-05-28 17:21:30,696 [wrapper] ==== pilot stdout END ====
[2025-05-28 13:21:30] 2025-05-28 17:21:30,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 13:21:30] 2025-05-28 17:21:30,700 [wrapper] pilotpid: 3820393
[2025-05-28 13:21:30] 2025-05-28 17:21:30,703 [wrapper] Pilot exit status: 0
[2025-05-28 13:21:30] 2025-05-28 17:21:30,715 [wrapper] pandaids: 6668051191
[2025-05-28 13:21:30] 2025-05-28 17:21:30,772 [wrapper] cleanup supervisor_pilot  598116 3820394
[2025-05-28 13:21:30] 2025-05-28 17:21:30,777 [wrapper] Test setup, not cleaning
[2025-05-28 13:21:30] 2025-05-28 17:21:30,782 [wrapper] apfmon messages muted
[2025-05-28 13:21:30] 2025-05-28 17:21:30,785 [wrapper] ==== wrapper stdout END ====
[2025-05-28 13:21:30] 2025-05-28 17:21:30,788 [wrapper] ==== wrapper stderr END ====
[2025-05-28 13:21:30]  *** Error codes and diagnostics ***
[2025-05-28 13:21:30]     "exeErrorCode": 0,
[2025-05-28 13:21:30]     "exeErrorDiag": "",
[2025-05-28 13:21:30]     "pilotErrorCode": 0,
[2025-05-28 13:21:30]     "pilotErrorDiag": "",
[2025-05-28 13:21:30]  *** Listing of results directory ***
[2025-05-28 13:21:30] total 413952
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:30 queuedata.json
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas    495897 May 28 01:33 pilot3.tar.gz
[2025-05-28 13:21:30] -rwx------. 1 boincer umatlas     37140 May 28 01:33 runpilot2-wrapper.sh
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas       100 May 28 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 13:21:30] -rwxr-xr-x. 1 boincer umatlas      7986 May 28 08:58 run_atlas
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas       105 May 28 08:58 job.xml
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas 222148082 May 28 08:58 EVNT.44871834._003100.pool.root.1
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas     15093 May 28 08:58 start_atlas.sh
[2025-05-28 13:21:30] drwxrwx--x. 2 boincer umatlas      4096 May 28 08:58 shared
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas    508878 May 28 08:58 input.tar.gz
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas         0 May 28 08:58 boinc_lockfile
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas      2559 May 28 08:58 pandaJob.out
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas    991853 May 28 08:59 agis_schedconf.cvmfs.json
[2025-05-28 13:21:30] drwx------. 4 boincer umatlas      4096 May 28 08:59 pilot3
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas      6839 May 28 13:09 init_data.xml
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas 194247959 May 28 13:20 HITS.44871837._079322.pool.root.1
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas       530 May 28 13:20 boinc_task_state.xml
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas        95 May 28 13:20 pilot_heartbeat.json
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas      1043 May 28 13:21 memory_monitor_summary.json
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas   1603667 May 28 13:21 agis_ddmendpoints.agis.ALL.json
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas    438555 May 28 13:21 log.44871837._079322.job.log.tgz.1
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas      7720 May 28 13:21 heartbeat.json
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas        28 May 28 13:21 wrapper_checkpoint.txt
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas      8192 May 28 13:21 boinc_mmap_file
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas      4662 May 28 13:21 pilotlog.txt
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas   1383436 May 28 13:21 log.44871837._079322.job.log.1
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas       357 May 28 13:21 output.list
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas       620 May 28 13:21 runtime_log
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas   1843200 May 28 13:21 result.tar.gz
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas       656 May 28 13:21 x5qKDm4aOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTzSKDmA2ScXn.diag
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas      8660 May 28 13:21 runtime_log.err
[2025-05-28 13:21:30] -rw-r--r--. 1 boincer umatlas     20945 May 28 13:21 stderr.txt
[2025-05-28 13:21:30] HITS file was successfully produced:
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas 194247959 May 28 13:20 shared/HITS.pool.root.1
[2025-05-28 13:21:30]  *** Contents of shared directory: ***
[2025-05-28 13:21:30] total 408964
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas 222148082 May 28 08:58 ATLAS.root_0
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas     15093 May 28 08:58 start_atlas.sh
[2025-05-28 13:21:30] -rw-r--r--. 2 boincer umatlas    508878 May 28 08:58 input.tar.gz
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas 194247959 May 28 13:20 HITS.pool.root.1
[2025-05-28 13:21:30] -rw-------. 1 boincer umatlas   1843200 May 28 13:21 result.tar.gz
13:21:32 (3814384): run_atlas exited; CPU time 49786.085924
13:21:32 (3814384): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN