Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:40:36 (2162378): wrapper (7.7.26015): starting
16:40:36 (2162378): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 16:40:36] Arguments: --nthreads 4
[2025-06-03 16:40:36] Threads: 4
[2025-06-03 16:40:36] Checking for CVMFS
[2025-06-03 16:40:36] No cvmfs_config command found, will try listing directly
[2025-06-03 16:40:36] CVMFS is ok
[2025-06-03 16:40:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:40:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:40:36] Further information can be found at the LHC@home message board.
[2025-06-03 16:40:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:40:36] Checking for apptainer binary...
[2025-06-03 16:40:36] which: no apptainer in ((null))
[2025-06-03 16:40:36] apptainer is not installed, using version from CVMFS
[2025-06-03 16:40:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:40:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-03 16:40:36] apptainer works
[2025-06-03 16:40:36] Set ATHENA_PROC_NUMBER=4
[2025-06-03 16:40:36] Set ATHENA_CORE_NUMBER=4
[2025-06-03 16:40:36] Starting ATLAS job with PandaID=6668051184
[2025-06-03 16:40:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:02:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:02:04] 2025-06-03 19:00:00,450 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4541/.job.ad'
[2025-06-03 21:02:04] 2025-06-03 19:00:00,450 | INFO     | total number of processed events: 400 (read)
[2025-06-03 21:02:04] 2025-06-03 19:00:00,453 | INFO     | executing command: lscpu
[2025-06-03 21:02:04] 2025-06-03 19:00:00,495 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 21:02:04] 2025-06-03 19:00:03,361 | WARNING  | process 2172783 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 21:02:04] 2025-06-03 19:00:03,361 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6668051184/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:02:04] 2025-06-03 19:00:03,664 | INFO     | number of running child processes to parent process 2172783: 1
[2025-06-03 21:02:04] 2025-06-03 19:00:03,664 | INFO     | maximum number of monitored processes: 6
[2025-06-03 21:02:04] 2025-06-03 19:00:04,619 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:02:04] 2025-06-03 19:00:04,620 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6668051184/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,621 | INFO     | extracted standard info from prmon json
[2025-06-03 21:02:04] 2025-06-03 19:00:04,621 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:02:04] 2025-06-03 19:00:04,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:02:04] 2025-06-03 19:00:04,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:02:04] 2025-06-03 19:00:04,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:02:04] 2025-06-03 19:00:04,627 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:02:04] 2025-06-03 19:00:04,627 | INFO     | sum of square deviations: 5141528960.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,629 | INFO     | sum of deviations: 14059741526.000021
[2025-06-03 21:02:04] 2025-06-03 19:00:04,629 | INFO     | mean x: 1748969418.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,629 | INFO     | mean y: 2351040.682352941
[2025-06-03 21:02:04] 2025-06-03 19:00:04,629 | INFO     | -- intersect: -4780284269.799043
[2025-06-03 21:02:04] 2025-06-03 19:00:04,630 | INFO     | intersect: -4780284269.799043
[2025-06-03 21:02:04] 2025-06-03 19:00:04,630 | INFO     | chi2: 1.764166659979618
[2025-06-03 21:02:04] 2025-06-03 19:00:04,631 | INFO     | sum of square deviations: 4844974562.5
[2025-06-03 21:02:04] 2025-06-03 19:00:04,632 | INFO     | sum of deviations: 13741333146.500006
[2025-06-03 21:02:04] 2025-06-03 19:00:04,633 | INFO     | mean x: 1748969265.5
[2025-06-03 21:02:04] 2025-06-03 19:00:04,633 | INFO     | mean y: 2350876.924
[2025-06-03 21:02:04] 2025-06-03 19:00:04,633 | INFO     | -- intersect: -4958081635.1971445
[2025-06-03 21:02:04] 2025-06-03 19:00:04,633 | INFO     | intersect: -4958081635.1971445
[2025-06-03 21:02:04] 2025-06-03 19:00:04,633 | INFO     | chi2: 1.7647552068112895
[2025-06-03 21:02:04] 2025-06-03 19:00:04,634 | INFO     | current chi2=1.7647552068112895 (change=-0.03336118094864871 %)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,634 | INFO     | right removable region: 249
[2025-06-03 21:02:04] 2025-06-03 19:00:04,634 | INFO     | sum of square deviations: 4844974562.5
[2025-06-03 21:02:04] 2025-06-03 19:00:04,636 | INFO     | sum of deviations: -28637636724.499996
[2025-06-03 21:02:04] 2025-06-03 19:00:04,636 | INFO     | mean x: 1748969570.5
[2025-06-03 21:02:04] 2025-06-03 19:00:04,636 | INFO     | mean y: 2372839.644
[2025-06-03 21:02:04] 2025-06-03 19:00:04,636 | INFO     | -- intersect: 10340168127.53903
[2025-06-03 21:02:04] 2025-06-03 19:00:04,636 | INFO     | intersect: 10340168127.53903
[2025-06-03 21:02:04] 2025-06-03 19:00:04,637 | INFO     | chi2: 0.10585859731510391
[2025-06-03 21:02:04] 2025-06-03 19:00:04,637 | INFO     | current chi2=0.10585859731510391 (change=93.9995126471596 %)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,638 | INFO     | sum of square deviations: 4560048290.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,639 | INFO     | sum of deviations: -29303756572.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,640 | INFO     | mean x: 1748969723.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,640 | INFO     | mean y: 2373194.942857143
[2025-06-03 21:02:04] 2025-06-03 19:00:04,640 | INFO     | -- intersect: 11241592552.988356
[2025-06-03 21:02:04] 2025-06-03 19:00:04,640 | INFO     | intersect: 11241592552.988356
[2025-06-03 21:02:04] 2025-06-03 19:00:04,640 | INFO     | chi2: 0.10209127782893107
[2025-06-03 21:02:04] 2025-06-03 19:00:04,641 | INFO     | current chi2=0.10209127782893107 (change=3.558822411899956 %)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,641 | INFO     | left removable region: 20
[2025-06-03 21:02:04] 2025-06-03 19:00:04,641 | INFO     | sum of square deviations: 3723716330.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,643 | INFO     | sum of deviations: -18937056550.000004
[2025-06-03 21:02:04] 2025-06-03 19:00:04,643 | INFO     | mean x: 1748969845.0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,643 | INFO     | mean y: 2367696.0480349343
[2025-06-03 21:02:04] 2025-06-03 19:00:04,643 | INFO     | -- intersect: 8896799474.37035
[2025-06-03 21:02:04] 2025-06-03 19:00:04,643 | INFO     | intersect: 8896799474.37035
[2025-06-03 21:02:04] 2025-06-03 19:00:04,644 | INFO     | chi2: 0.0857610501220488
[2025-06-03 21:02:04] 2025-06-03 19:00:04,644 | INFO     | -- intersect: 8896799474.37035
[2025-06-03 21:02:04] 2025-06-03 19:00:04,644 | INFO     | current memory leak: -5.09 B/s (using 229 data points, chi2=0.09)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | ..............................
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . Timing measurements:
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . get job = 0 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . initial setup = 1 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . payload setup = 6 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . stage-in = 0 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . payload execution = 15528 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,645 | INFO     | . stage-out = 1 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,646 | INFO     | . log creation = 0 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,646 | INFO     | ..............................
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | 
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | job summary report
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | --------------------------------------------------
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | PanDA job id: 6668051184
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | task id: 44871837
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | errors: (none)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | pilot state: finished 
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | transexitcode: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | exeerrorcode: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | exeerrordiag: 
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | exitcode: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | exitmsg: OK
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | cpuconsumptiontime: 59668 s
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | nevents: 400
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | neventsw: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,757 | INFO     | pid: 2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | pgrp: 2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | corecount: 4
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | event service: False
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | sizes: {0: 2405245, 4: 2405451, 11: 2405479, 15538: 2436402, 15539: 2445421, 15544: 2445535}
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | --------------------------------------------------
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | 
[2025-06-03 21:02:04] 2025-06-03 19:00:04,758 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:02:04] 2025-06-03 19:00:04,779 | INFO     | job 6668051184 has completed (purged errors)
[2025-06-03 21:02:04] 2025-06-03 19:00:04,780 | INFO     | overall cleanup function is called
[2025-06-03 21:02:04] 2025-06-03 19:00:05,788 | INFO     | --- collectZombieJob: --- 10, [2172783]
[2025-06-03 21:02:04] 2025-06-03 19:00:05,788 | INFO     | zombie collector waiting for pid 2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:05,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:02:04] 2025-06-03 19:00:05,788 | INFO     | collected zombie processes
[2025-06-03 21:02:04] 2025-06-03 19:00:05,788 | INFO     | will attempt to kill all subprocesses of pid=2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:06,068 | INFO     | process IDs to be killed: [2172783] (in reverse order)
[2025-06-03 21:02:04] 2025-06-03 19:00:06,141 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:02:04] 2025-06-03 19:00:06,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:02:04] 2025-06-03 19:00:06,150 | INFO     | did not find any defunct processes belonging to 2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:06,157 | INFO     | did not find any defunct processes belonging to 2172783
[2025-06-03 21:02:04] 2025-06-03 19:00:06,158 | INFO     | ready for new job
[2025-06-03 21:02:04] 2025-06-03 19:00:06,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:02:04] 2025-06-03 19:00:06,160 | INFO     | **************************************
[2025-06-03 21:02:04] 2025-06-03 19:00:06,160 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:02:04] 2025-06-03 19:00:06,160 | INFO     | **************************************
[2025-06-03 21:02:04] 2025-06-03 19:00:06,161 | INFO     | 
[2025-06-03 21:02:04] 2025-06-03 19:00:06,163 | INFO     | architecture information:
[2025-06-03 21:02:04] 2025-06-03 19:00:06,163 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:02:04] 2025-06-03 19:00:06,176 | INFO     | cat /etc/os-release:
[2025-06-03 21:02:04] NAME="CentOS Linux"
[2025-06-03 21:02:04] VERSION="7 (Core)"
[2025-06-03 21:02:04] ID="centos"
[2025-06-03 21:02:04] ID_LIKE="rhel fedora"
[2025-06-03 21:02:04] VERSION_ID="7"
[2025-06-03 21:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:02:04] ANSI_COLOR="0;31"
[2025-06-03 21:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:02:04] HOME_URL="https://www.centos.org/"
[2025-06-03 21:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:02:04] 
[2025-06-03 21:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:02:04] 
[2025-06-03 21:02:04] 2025-06-03 19:00:06,176 | INFO     | **************************************
[2025-06-03 21:02:04] 2025-06-03 19:00:06,679 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-03 21:02:04] 2025-06-03 19:00:06,693 | INFO     | sufficient remaining disk space (1650038145024 B)
[2025-06-03 21:02:04] 2025-06-03 19:00:06,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:02:04] 2025-06-03 19:00:06,694 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:02:04] 2025-06-03 19:00:06,694 | INFO     | update_server=False
[2025-06-03 21:02:04] 2025-06-03 19:00:06,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:02:04] 2025-06-03 19:00:06,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:02:04] 2025-06-03 19:00:06,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:02:04] 2025-06-03 19:00:06,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:02:04] 2025-06-03 19:00:06,727 | INFO     | all data control threads have been joined
[2025-06-03 21:02:04] 2025-06-03 19:00:06,988 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:02:04] 2025-06-03 19:00:06,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:02:04] 2025-06-03 19:00:06,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:02:04] 2025-06-03 19:00:07,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:02:04] 2025-06-03 19:00:07,177 | INFO     | aborting loop
[2025-06-03 21:02:04] 2025-06-03 19:00:07,700 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:07,700 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:07,732 | INFO     | [data] control thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:07,745 | INFO     | all payload control threads have been joined
[2025-06-03 21:02:04] 2025-06-03 19:00:07,906 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:07,920 | INFO     | [job] validate thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,148 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,183 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,264 | INFO     | all job control threads have been joined
[2025-06-03 21:02:04] 2025-06-03 19:00:08,358 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,506 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,573 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,701 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:08,750 | INFO     | [payload] control thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:09,020 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:09,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:09,269 | INFO     | [job] control thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:10,699 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:02:04] 2025-06-03 19:00:12,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22541365692224)>', '<ExcThread(monitor, started 22540785268480)>']
[2025-06-03 21:02:04] 2025-06-03 19:00:13,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:02:04] 2025-06-03 19:00:13,018 | INFO     | [monitor] control thread has ended
[2025-06-03 21:02:04] 2025-06-03 19:00:17,612 | INFO     | all workflow threads have been joined
[2025-06-03 21:02:04] 2025-06-03 19:00:17,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:02:04] 2025-06-03 19:00:17,612 | INFO     | traces error code: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:17,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:02:04] 2025-06-03 19:00:17,748 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:02:04] 2025-06-03 19:00:17,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:02:04] 2025-06-03 19:00:17,753 [wrapper] pilotpid: 2165980
[2025-06-03 21:02:04] 2025-06-03 19:00:17,755 [wrapper] Pilot exit status: 0
[2025-06-03 21:02:04] 2025-06-03 19:00:17,763 [wrapper] pandaids: 6668051184
[2025-06-03 21:02:04] 2025-06-03 19:00:17,811 [wrapper] cleanup supervisor_pilot 2411697 2165981
[2025-06-03 21:02:04] 2025-06-03 19:00:17,813 [wrapper] Test setup, not cleaning
[2025-06-03 21:02:04] 2025-06-03 19:00:17,815 [wrapper] apfmon messages muted
[2025-06-03 21:02:04] 2025-06-03 19:00:17,818 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:02:04] 2025-06-03 19:00:17,820 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:02:04]  *** Error codes and diagnostics ***
[2025-06-03 21:02:04]     "exeErrorCode": 0,
[2025-06-03 21:02:04]     "exeErrorDiag": "",
[2025-06-03 21:02:04]     "pilotErrorCode": 0,
[2025-06-03 21:02:04]     "pilotErrorDiag": "",
[2025-06-03 21:02:04]  *** Listing of results directory ***
[2025-06-03 21:02:04] total 418480
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc      5111 May 28 07:30 queuedata.json
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc    495897 May 28 07:33 pilot3.tar.gz
[2025-06-03 21:02:04] -rwx------ 1 boinc boinc     37140 May 28 07:33 runpilot2-wrapper.sh
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc       100 Jun  3 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:02:04] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 16:40 run_atlas
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc       105 Jun  3 16:40 job.xml
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc      6419 Jun  3 16:40 init_data.xml
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc 222148082 Jun  3 16:40 EVNT.44871834._003100.pool.root.1
[2025-06-03 21:02:04] drwxrwx--x 2 boinc boinc      4096 Jun  3 16:40 shared
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc    508877 Jun  3 16:40 input.tar.gz
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:40 start_atlas.sh
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc         0 Jun  3 16:40 boinc_lockfile
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc      2559 Jun  3 16:40 pandaJob.out
[2025-06-03 21:02:04] -rw------- 1 boinc boinc    982724 Jun  3 16:40 agis_schedconf.cvmfs.json
[2025-06-03 21:02:04] drwx------ 4 boinc boinc      4096 Jun  3 16:40 pilot3
[2025-06-03 21:02:04] -rw------- 1 boinc boinc 198950815 Jun  3 20:59 HITS.44871837._079315.pool.root.1
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc       528 Jun  3 20:59 boinc_task_state.xml
[2025-06-03 21:02:04] -rw------- 1 boinc boinc      1037 Jun  3 20:59 memory_monitor_summary.json
[2025-06-03 21:02:04] -rw------- 1 boinc boinc   1603667 Jun  3 20:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:02:04] -rw------- 1 boinc boinc    350433 Jun  3 21:00 log.44871837._079315.job.log.tgz.1
[2025-06-03 21:02:04] -rw------- 1 boinc boinc      7727 Jun  3 21:00 heartbeat.json
[2025-06-03 21:02:04] -rw------- 1 boinc boinc        95 Jun  3 21:00 pilot_heartbeat.json
[2025-06-03 21:02:04] -rw------- 1 boinc boinc      4364 Jun  3 21:00 pilotlog.txt
[2025-06-03 21:02:04] -rw------- 1 boinc boinc   1446413 Jun  3 21:00 log.44871837._079315.job.log.1
[2025-06-03 21:02:04] -rw------- 1 boinc boinc       357 Jun  3 21:00 output.list
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc       620 Jun  3 21:00 runtime_log
[2025-06-03 21:02:04] -rw------- 1 boinc boinc   1812480 Jun  3 21:00 result.tar.gz
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc      9026 Jun  3 21:00 runtime_log.err
[2025-06-03 21:02:04] -rw------- 1 boinc boinc       664 Jun  3 21:00 3jgKDm4aOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMzSKDmlqmaen.diag
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc        27 Jun  3 21:02 wrapper_checkpoint.txt
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc      8192 Jun  3 21:02 boinc_mmap_file
[2025-06-03 21:02:04] -rw-r--r-- 1 boinc boinc     20946 Jun  3 21:02 stderr.txt
[2025-06-03 21:02:04] HITS file was successfully produced:
[2025-06-03 21:02:04] -rw------- 1 boinc boinc 198950815 Jun  3 20:59 shared/HITS.pool.root.1
[2025-06-03 21:02:04]  *** Contents of shared directory: ***
[2025-06-03 21:02:04] total 413528
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc 222148082 Jun  3 16:40 ATLAS.root_0
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc    508877 Jun  3 16:40 input.tar.gz
[2025-06-03 21:02:04] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:40 start_atlas.sh
[2025-06-03 21:02:04] -rw------- 1 boinc boinc 198950815 Jun  3 20:59 HITS.pool.root.1
[2025-06-03 21:02:04] -rw------- 1 boinc boinc   1812480 Jun  3 21:00 result.tar.gz
21:02:06 (2162378): run_atlas exited; CPU time 60282.481533
21:02:06 (2162378): called boinc_finish(0)

</stderr_txt>
]]>

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