Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:07:15 (23143): wrapper (7.7.26015): starting
04:07:15 (23143): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 04:07:15] Arguments: --nthreads 8
[2025-05-29 04:07:15] Threads: 8
[2025-05-29 04:07:15] Checking for CVMFS
[2025-05-29 04:07:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 04:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 04:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 04:07:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 04:07:16] 2.11.2.0 13816 23969 87964 146538 2 114 14901918 25165825 3707 130560 0 12685699 99.791 14416062 2085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 04:07:16] CVMFS is ok
[2025-05-29 04:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 04:07:16] Checking for apptainer binary...
[2025-05-29 04:07:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 04:07:16] Running /usr/bin/apptainer --version
[2025-05-29 04:07:16] apptainer version 1.3.2-1.el7
[2025-05-29 04:07:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 04:07:18] cg-vwn369.simple-grid.lan
[2025-05-29 04:07:18] apptainer works
[2025-05-29 04:07:18] Set ATHENA_PROC_NUMBER=8
[2025-05-29 04:07:18] Set ATHENA_CORE_NUMBER=8
[2025-05-29 04:07:18] Starting ATLAS job with PandaID=6668051382
[2025-05-29 04:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 11:44:53]  *** The last 200 lines of the pilot log: ***
[2025-05-29 11:44:53] 2025-05-29 07:19:26,250 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6668051382/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,251 | INFO     | extracted standard info from prmon json
[2025-05-29 11:44:53] 2025-05-29 07:19:26,251 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 11:44:53] 2025-05-29 07:19:26,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 11:44:53] 2025-05-29 07:19:26,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 11:44:53] 2025-05-29 07:19:26,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 11:44:53] 2025-05-29 07:19:26,259 | INFO     | fitting pss+swap vs Time
[2025-05-29 11:44:53] 2025-05-29 07:19:26,260 | INFO     | sum of square deviations: 8797783560.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,263 | INFO     | sum of deviations: 35134165730.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,263 | INFO     | mean x: 1748493799.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,263 | INFO     | mean y: 2478622.6262295083
[2025-05-29 11:44:53] 2025-05-29 07:19:26,264 | INFO     | -- intersect: -6980174507.33362
[2025-05-29 11:44:53] 2025-05-29 07:19:26,264 | INFO     | intersect: -6980174507.33362
[2025-05-29 11:44:53] 2025-05-29 07:19:26,264 | INFO     | chi2: 2.3628984776355217
[2025-05-29 11:44:53] 2025-05-29 07:19:26,265 | INFO     | sum of square deviations: 8372156975.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,268 | INFO     | sum of deviations: 54605427279.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,268 | INFO     | mean x: 1748493646.5
[2025-05-29 11:44:53] 2025-05-29 07:19:26,268 | INFO     | mean y: 2485502.7466666666
[2025-05-29 11:44:53] 2025-05-29 07:19:26,269 | INFO     | -- intersect: -11401653591.497835
[2025-05-29 11:44:53] 2025-05-29 07:19:26,269 | INFO     | intersect: -11401653591.497835
[2025-05-29 11:44:53] 2025-05-29 07:19:26,269 | INFO     | chi2: 1.5870249636531168
[2025-05-29 11:44:53] 2025-05-29 07:19:26,269 | INFO     | current chi2=1.5870249636531168 (change=32.835668621649674 %)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,270 | INFO     | sum of square deviations: 7960484140.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,273 | INFO     | sum of deviations: 53556373374.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,273 | INFO     | mean x: 1748493494.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,273 | INFO     | mean y: 2485114.1016949154
[2025-05-29 11:44:53] 2025-05-29 07:19:26,273 | INFO     | -- intersect: -11760991674.468836
[2025-05-29 11:44:53] 2025-05-29 07:19:26,274 | INFO     | intersect: -11760991674.468836
[2025-05-29 11:44:53] 2025-05-29 07:19:26,274 | INFO     | chi2: 1.5874316140060132
[2025-05-29 11:44:53] 2025-05-29 07:19:26,274 | INFO     | current chi2=1.5874316140060132 (change=-0.025623437703227902 %)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,274 | INFO     | right removable region: 294
[2025-05-29 11:44:53] 2025-05-29 07:19:26,275 | INFO     | sum of square deviations: 8372156975.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,278 | INFO     | sum of deviations: -15051225613.499998
[2025-05-29 11:44:53] 2025-05-29 07:19:26,278 | INFO     | mean x: 1748493951.5
[2025-05-29 11:44:53] 2025-05-29 07:19:26,278 | INFO     | mean y: 2496482.93
[2025-05-29 11:44:53] 2025-05-29 07:19:26,278 | INFO     | -- intersect: 3145889162.5526395
[2025-05-29 11:44:53] 2025-05-29 07:19:26,279 | INFO     | intersect: 3145889162.5526395
[2025-05-29 11:44:53] 2025-05-29 07:19:26,279 | INFO     | chi2: 0.8435852716315431
[2025-05-29 11:44:53] 2025-05-29 07:19:26,279 | INFO     | current chi2=0.8435852716315431 (change=64.2987085727148 %)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,280 | INFO     | sum of square deviations: 7960484140.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,283 | INFO     | sum of deviations: -13548607580.999998
[2025-05-29 11:44:53] 2025-05-29 07:19:26,283 | INFO     | mean x: 1748494104.0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,283 | INFO     | mean y: 2495907.305084746
[2025-05-29 11:44:53] 2025-05-29 07:19:26,283 | INFO     | -- intersect: 2978402906.949983
[2025-05-29 11:44:53] 2025-05-29 07:19:26,283 | INFO     | intersect: 2978402906.949983
[2025-05-29 11:44:53] 2025-05-29 07:19:26,284 | INFO     | chi2: 0.8286055094621267
[2025-05-29 11:44:53] 2025-05-29 07:19:26,284 | INFO     | current chi2=0.8286055094621267 (change=1.7757259014781743 %)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,284 | INFO     | left removable region: 20
[2025-05-29 11:44:53] 2025-05-29 07:19:26,285 | INFO     | sum of square deviations: 6378584712.5
[2025-05-29 11:44:53] 2025-05-29 07:19:26,288 | INFO     | sum of deviations: 10334165793.999998
[2025-05-29 11:44:53] 2025-05-29 07:19:26,288 | INFO     | mean x: 1748494073.5
[2025-05-29 11:44:53] 2025-05-29 07:19:26,288 | INFO     | mean y: 2501387.0364963505
[2025-05-29 11:44:53] 2025-05-29 07:19:26,288 | INFO     | -- intersect: -2830294359.951934
[2025-05-29 11:44:53] 2025-05-29 07:19:26,288 | INFO     | intersect: -2830294359.951934
[2025-05-29 11:44:53] 2025-05-29 07:19:26,289 | INFO     | chi2: 0.0017361433590096598
[2025-05-29 11:44:53] 2025-05-29 07:19:26,289 | INFO     | -- intersect: -2830294359.951934
[2025-05-29 11:44:53] 2025-05-29 07:19:26,289 | INFO     | current memory leak: 1.62 B/s (using 274 data points, chi2=0.00)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,290 | INFO     | ..............................
[2025-05-29 11:44:53] 2025-05-29 07:19:26,290 | INFO     | . Timing measurements:
[2025-05-29 11:44:53] 2025-05-29 07:19:26,290 | INFO     | . get job = 0 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,290 | INFO     | . initial setup = 2 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,290 | INFO     | . payload setup = 14 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,291 | INFO     | . stage-in = 0 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,291 | INFO     | . payload execution = 18592 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,291 | INFO     | . stage-out = 4 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,291 | INFO     | . log creation = 1 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,291 | INFO     | ..............................
[2025-05-29 11:44:53] 2025-05-29 07:19:26,519 | INFO     | 
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | job summary report
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | --------------------------------------------------
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | PanDA job id: 6668051382
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | task id: 44871837
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | errors: (none)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | pilot state: finished 
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | transexitcode: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | exeerrorcode: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,520 | INFO     | exeerrordiag: 
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | exitcode: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | exitmsg: OK
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | cpuconsumptiontime: 69815 s
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | nevents: 400
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | neventsw: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | pid: 1268
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | pgrp: 1268
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | corecount: 8
[2025-05-29 11:44:53] 2025-05-29 07:19:26,521 | INFO     | event service: False
[2025-05-29 11:44:53] 2025-05-29 07:19:26,522 | INFO     | sizes: {0: 2405232, 1: 2405260, 9: 2405466, 12: 2405494, 18611: 2437235, 18616: 2446176, 18618: 2446360, 18689: 2446530}
[2025-05-29 11:44:53] 2025-05-29 07:19:26,522 | INFO     | --------------------------------------------------
[2025-05-29 11:44:53] 2025-05-29 07:19:26,522 | INFO     | 
[2025-05-29 11:44:53] 2025-05-29 07:19:26,522 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-29 11:44:53] 2025-05-29 07:19:26,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | job 6668051382 has completed (purged errors)
[2025-05-29 11:44:53] 2025-05-29 07:19:26,644 | INFO     | overall cleanup function is called
[2025-05-29 11:44:53] 2025-05-29 07:19:27,653 | INFO     | --- collectZombieJob: --- 10, [1268]
[2025-05-29 11:44:53] 2025-05-29 07:19:27,653 | INFO     | zombie collector waiting for pid 1268
[2025-05-29 11:44:53] 2025-05-29 07:19:27,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 11:44:53] 2025-05-29 07:19:27,653 | INFO     | collected zombie processes
[2025-05-29 11:44:53] 2025-05-29 07:19:27,653 | INFO     | will attempt to kill all subprocesses of pid=1268
[2025-05-29 11:44:53] 2025-05-29 07:19:27,772 | INFO     | process IDs to be killed: [1268] (in reverse order)
[2025-05-29 11:44:53] 2025-05-29 07:19:28,574 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 11:44:53] 2025-05-29 07:19:28,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 11:44:53] 2025-05-29 07:19:28,578 | INFO     | did not find any defunct processes belonging to 1268
[2025-05-29 11:44:53] 2025-05-29 07:19:28,580 | INFO     | did not find any defunct processes belonging to 1268
[2025-05-29 11:44:53] 2025-05-29 07:19:28,581 | INFO     | ready for new job
[2025-05-29 11:44:53] 2025-05-29 07:19:28,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 11:44:53] 2025-05-29 07:19:28,583 | INFO     | **************************************
[2025-05-29 11:44:53] 2025-05-29 07:19:28,583 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 11:44:53] 2025-05-29 07:19:28,583 | INFO     | **************************************
[2025-05-29 11:44:53] 2025-05-29 07:19:28,583 | INFO     | 
[2025-05-29 11:44:53] 2025-05-29 07:19:28,584 | INFO     | pilot is running in a VM
[2025-05-29 11:44:53] 2025-05-29 07:19:28,584 | INFO     | architecture information:
[2025-05-29 11:44:53] 2025-05-29 07:19:28,590 | INFO     | executing command: cat /etc/os-release
[2025-05-29 11:44:53] 2025-05-29 07:19:28,708 | INFO     | cat /etc/os-release:
[2025-05-29 11:44:53] NAME="CentOS Linux"
[2025-05-29 11:44:53] VERSION="7 (Core)"
[2025-05-29 11:44:53] ID="centos"
[2025-05-29 11:44:53] ID_LIKE="rhel fedora"
[2025-05-29 11:44:53] VERSION_ID="7"
[2025-05-29 11:44:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 11:44:53] ANSI_COLOR="0;31"
[2025-05-29 11:44:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 11:44:53] HOME_URL="https://www.centos.org/"
[2025-05-29 11:44:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 11:44:53] 
[2025-05-29 11:44:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 11:44:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 11:44:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 11:44:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 11:44:53] 
[2025-05-29 11:44:53] 2025-05-29 07:19:28,709 | INFO     | **************************************
[2025-05-29 11:44:53] 2025-05-29 07:19:29,213 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-29 11:44:53] 2025-05-29 07:19:29,278 | INFO     | sufficient remaining disk space (496220766208 B)
[2025-05-29 11:44:53] 2025-05-29 07:19:29,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 11:44:53] 2025-05-29 07:19:29,278 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 11:44:53] 2025-05-29 07:19:29,278 | INFO     | update_server=False
[2025-05-29 11:44:53] 2025-05-29 07:19:29,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 11:44:53] 2025-05-29 07:19:29,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 11:44:53] 2025-05-29 07:19:29,279 | INFO     | aborting loop
[2025-05-29 11:44:53] 2025-05-29 07:19:29,391 | INFO     | all payload control threads have been joined
[2025-05-29 11:44:53] 2025-05-29 07:19:29,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 11:44:53] 2025-05-29 07:19:29,683 | INFO     | all data control threads have been joined
[2025-05-29 11:44:53] 2025-05-29 07:19:29,941 | INFO     | all job control threads have been joined
[2025-05-29 11:44:53] 2025-05-29 07:19:29,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 11:44:53] 2025-05-29 07:19:30,068 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 11:44:53] 2025-05-29 07:19:30,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 11:44:53] 2025-05-29 07:19:30,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 11:44:53] 2025-05-29 07:19:30,285 | INFO     | [job] job monitor thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,289 | INFO     | [job] retrieve thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,390 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,397 | INFO     | [payload] control thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,425 | INFO     | [payload] validate_post thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,672 | INFO     | [job] validate thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,688 | INFO     | [data] control thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:30,948 | INFO     | [job] control thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,104 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 11:44:53] 2025-05-29 07:19:31,547 | INFO     | [payload] failed_post thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,587 | INFO     | [data] copytool_out thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,685 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:31,770 | INFO     | [data] copytool_in thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:32,544 | INFO     | [job] queue monitor thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:33,959 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 11:44:53] 2025-05-29 07:19:34,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507706410816)>', '<ExcThread(monitor, started 140506835187456)>']
[2025-05-29 11:44:53] 2025-05-29 07:19:34,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 11:44:53] 2025-05-29 07:19:34,092 | INFO     | [monitor] control thread has ended
[2025-05-29 11:44:53] 2025-05-29 07:19:39,108 | INFO     | all workflow threads have been joined
[2025-05-29 11:44:53] 2025-05-29 07:19:39,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 11:44:53] 2025-05-29 07:19:39,108 | INFO     | traces error code: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:39,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 11:44:53] 2025-05-29 07:19:39,288 [wrapper] ==== pilot stdout END ====
[2025-05-29 11:44:53] 2025-05-29 07:19:39,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 11:44:53] 2025-05-29 07:19:39,310 [wrapper] pilotpid: 27135
[2025-05-29 11:44:53] 2025-05-29 07:19:39,436 [wrapper] Pilot exit status: 0
[2025-05-29 11:44:53] 2025-05-29 07:19:39,969 [wrapper] pandaids: 6668051382
[2025-05-29 11:44:53] 2025-05-29 07:19:40,404 [wrapper] cleanup supervisor_pilot 11369 27136
[2025-05-29 11:44:53] 2025-05-29 07:19:40,468 [wrapper] Test setup, not cleaning
[2025-05-29 11:44:53] 2025-05-29 07:19:40,578 [wrapper] apfmon messages muted
[2025-05-29 11:44:53] 2025-05-29 07:19:40,679 [wrapper] ==== wrapper stdout END ====
[2025-05-29 11:44:53] 2025-05-29 07:19:40,743 [wrapper] ==== wrapper stderr END ====
[2025-05-29 11:44:53]  *** Error codes and diagnostics ***
[2025-05-29 11:44:53]     "exeErrorCode": 0,
[2025-05-29 11:44:53]     "exeErrorDiag": "",
[2025-05-29 11:44:53]     "pilotErrorCode": 0,
[2025-05-29 11:44:53]     "pilotErrorDiag": "",
[2025-05-29 11:44:53]  *** Listing of results directory ***
[2025-05-29 11:44:53] total 421596
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc    495897 May 28 07:33 pilot3.tar.gz
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc      5111 May 28 07:35 queuedata.json
[2025-05-29 11:44:53] -rwx------. 1 boinc boinc     37140 May 28 07:38 runpilot2-wrapper.sh
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc       100 May 29 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 11:44:53] -rwxr-xr-x. 1 boinc boinc      7986 May 29 04:07 run_atlas
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc       105 May 29 04:07 job.xml
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc      6371 May 29 04:07 init_data.xml
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc 224716627 May 29 04:07 EVNT.44871834._003104.pool.root.1
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc     15093 May 29 04:07 start_atlas.sh
[2025-05-29 11:44:53] drwxrwx--x. 2 boinc boinc        68 May 29 04:07 shared
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc    508877 May 29 04:07 input.tar.gz
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc         0 May 29 04:07 boinc_lockfile
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc      2558 May 29 04:07 pandaJob.out
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc    993415 May 29 04:07 agis_schedconf.cvmfs.json
[2025-05-29 11:44:53] drwx------. 4 boinc boinc      4096 May 29 04:07 pilot3
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc 199117554 May 29 09:17 HITS.44871837._079404.pool.root.1
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc       531 May 29 09:17 boinc_task_state.xml
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc      1020 May 29 09:18 memory_monitor_summary.json
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc   1603667 May 29 09:18 agis_ddmendpoints.agis.ALL.json
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc    417209 May 29 09:18 log.44871837._079404.job.log.tgz.1
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc        95 May 29 09:19 pilot_heartbeat.json
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc      7688 May 29 09:19 heartbeat.json
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc      4416 May 29 09:19 pilotlog.txt
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc   1613090 May 29 09:19 log.44871837._079404.job.log.1
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc       357 May 29 09:19 output.list
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc       620 May 29 09:19 runtime_log
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc   2048000 May 29 09:19 result.tar.gz
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc       657 May 29 09:19 zNtMDmefOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYNbKDm6xTMLn.diag
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc      8659 May 29 09:19 runtime_log.err
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc      8192 May 29 11:44 boinc_mmap_file
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc        28 May 29 11:44 wrapper_checkpoint.txt
[2025-05-29 11:44:53] -rw-r--r--. 1 boinc boinc     20479 May 29 11:44 stderr.txt
[2025-05-29 11:44:53] HITS file was successfully produced:
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc 199117554 May 29 09:17 shared/HITS.pool.root.1
[2025-05-29 11:44:53]  *** Contents of shared directory: ***
[2025-05-29 11:44:53] total 416420
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc 224716627 May 29 04:07 ATLAS.root_0
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc     15093 May 29 04:07 start_atlas.sh
[2025-05-29 11:44:53] -rw-r--r--. 2 boinc boinc    508877 May 29 04:07 input.tar.gz
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc 199117554 May 29 09:17 HITS.pool.root.1
[2025-05-29 11:44:53] -rw-------. 1 boinc boinc   2048000 May 29 09:19 result.tar.gz
11:44:55 (23143): run_atlas exited; CPU time 70049.979161
11:44:55 (23143): called boinc_finish(0)

</stderr_txt>
]]>

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