Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:57 (2476519): wrapper (7.7.26015): starting
11:23:57 (2476519): wrapper: running run_atlas (--nthreads 4)
[2025-05-30 11:23:57] Arguments: --nthreads 4
[2025-05-30 11:23:57] Threads: 4
[2025-05-30 11:23:57] Checking for CVMFS
[2025-05-30 11:23:57] No cvmfs_config command found, will try listing directly
[2025-05-30 11:23:57] CVMFS is ok
[2025-05-30 11:23:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 11:23:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 11:23:57] Further information can be found at the LHC@home message board.
[2025-05-30 11:23:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 11:23:57] Checking for apptainer binary...
[2025-05-30 11:23:57] which: no apptainer in ((null))
[2025-05-30 11:23:57] apptainer is not installed, using version from CVMFS
[2025-05-30 11:23:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 11:23:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-05-30 11:23:57] apptainer works
[2025-05-30 11:23:57] Set ATHENA_PROC_NUMBER=4
[2025-05-30 11:23:57] Set ATHENA_CORE_NUMBER=4
[2025-05-30 11:23:57] Starting ATLAS job with PandaID=6667928421
[2025-05-30 11:23:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 13:44:46]  *** The last 200 lines of the pilot log: ***
[2025-05-30 13:44:46] 2025-05-30 11:44:27,645 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 13:44:46] 2025-05-30 11:44:30,182 | WARNING  | process 2487821 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 13:44:46] 2025-05-30 11:44:30,183 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6667928421/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:44:46] 2025-05-30 11:44:30,613 | INFO     | number of running child processes to parent process 2487821: 1
[2025-05-30 13:44:46] 2025-05-30 11:44:30,613 | INFO     | maximum number of monitored processes: 6
[2025-05-30 13:44:46] 2025-05-30 11:44:32,474 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 13:44:46] 2025-05-30 11:44:32,474 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6667928421/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,475 | INFO     | extracted standard info from prmon json
[2025-05-30 13:44:46] 2025-05-30 11:44:32,475 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 13:44:46] 2025-05-30 11:44:32,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 13:44:46] 2025-05-30 11:44:32,475 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 13:44:46] 2025-05-30 11:44:32,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 13:44:46] 2025-05-30 11:44:32,479 | INFO     | fitting pss+swap vs Time
[2025-05-30 13:44:46] 2025-05-30 11:44:32,479 | INFO     | sum of square deviations: 814878534.5
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | sum of deviations: 14647201660.000004
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | mean x: 1748601250.5
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | mean y: 2311501.6666666665
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | -- intersect: -31428280978.864162
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | intersect: -31428280978.864162
[2025-05-30 13:44:46] 2025-05-30 11:44:32,480 | INFO     | chi2: 1.4902013806454009
[2025-05-30 13:44:46] 2025-05-30 11:44:32,481 | INFO     | sum of square deviations: 729472282.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,481 | INFO     | sum of deviations: 14144362190.000002
[2025-05-30 13:44:46] 2025-05-30 11:44:32,481 | INFO     | mean x: 1748601098.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | mean y: 2310603.4962406014
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | -- intersect: -33902812135.55211
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | intersect: -33902812135.55211
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | chi2: 1.4922231102553207
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | current chi2=1.4922231102553207 (change=-0.13566821479149754 %)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | right removable region: 132
[2025-05-30 13:44:46] 2025-05-30 11:44:32,482 | INFO     | sum of square deviations: 729472282.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,483 | INFO     | sum of deviations: -4398791252.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,483 | INFO     | mean x: 1748601403.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,483 | INFO     | mean y: 2344905.827067669
[2025-05-30 13:44:46] 2025-05-30 11:44:32,483 | INFO     | -- intersect: 10546587291.10707
[2025-05-30 13:44:46] 2025-05-30 11:44:32,484 | INFO     | intersect: 10546587291.10707
[2025-05-30 13:44:46] 2025-05-30 11:44:32,484 | INFO     | chi2: 0.0047270032921336875
[2025-05-30 13:44:46] 2025-05-30 11:44:32,484 | INFO     | current chi2=0.0047270032921336875 (change=99.68279432877142 %)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,484 | INFO     | sum of square deviations: 650252192.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | sum of deviations: -3795643992.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | mean x: 1748601555.5
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | mean y: 2343736.46875
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | -- intersect: 10209258945.96862
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | intersect: 10209258945.96862
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | chi2: 0.004585631400147918
[2025-05-30 13:44:46] 2025-05-30 11:44:32,485 | INFO     | current chi2=0.004585631400147918 (change=2.990729712861204 %)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,486 | INFO     | left removable region: 20
[2025-05-30 13:44:46] 2025-05-30 11:44:32,486 | INFO     | sum of square deviations: 435610028.0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,486 | INFO     | sum of deviations: -2381233423.500001
[2025-05-30 13:44:46] 2025-05-30 11:44:32,486 | INFO     | mean x: 1748601677.5
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | mean y: 2341240.223214286
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | -- intersect: 9560956724.739035
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | intersect: 9560956724.739035
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | chi2: 0.0040512360066997
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | -- intersect: 9560956724.739035
[2025-05-30 13:44:46] 2025-05-30 11:44:32,487 | INFO     | current memory leak: -5.47 B/s (using 112 data points, chi2=0.00)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | ..............................
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . Timing measurements:
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . get job = 0 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . initial setup = 1 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . payload setup = 6 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . stage-in = 0 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . payload execution = 8392 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . stage-out = 0 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | . log creation = 0 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,488 | INFO     | ..............................
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | 
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | job summary report
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | --------------------------------------------------
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | PanDA job id: 6667928421
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | task id: 44871837
[2025-05-30 13:44:46] 2025-05-30 11:44:32,957 | INFO     | errors: (none)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | pilot state: finished 
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | transexitcode: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | exeerrorcode: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | exeerrordiag: 
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | exitcode: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | exitmsg: OK
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | cpuconsumptiontime: 32093 s
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | nevents: 400
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | neventsw: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | pid: 2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | pgrp: 2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:32,958 | INFO     | corecount: 4
[2025-05-30 13:44:46] 2025-05-30 11:44:32,959 | INFO     | event service: False
[2025-05-30 13:44:46] 2025-05-30 11:44:32,959 | INFO     | sizes: {0: 2405245, 4: 2405451, 11: 2405479, 8403: 2433205, 8405: 2442224, 8412: 2442338}
[2025-05-30 13:44:46] 2025-05-30 11:44:32,959 | INFO     | --------------------------------------------------
[2025-05-30 13:44:46] 2025-05-30 11:44:32,959 | INFO     | 
[2025-05-30 13:44:46] 2025-05-30 11:44:32,959 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2025-05-30 13:44:46] 2025-05-30 11:44:32,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 13:44:46] 2025-05-30 11:44:32,983 | INFO     | job 6667928421 has completed (purged errors)
[2025-05-30 13:44:46] 2025-05-30 11:44:32,983 | INFO     | overall cleanup function is called
[2025-05-30 13:44:46] 2025-05-30 11:44:33,989 | INFO     | --- collectZombieJob: --- 10, [2487821]
[2025-05-30 13:44:46] 2025-05-30 11:44:33,989 | INFO     | zombie collector waiting for pid 2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:33,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 13:44:46] 2025-05-30 11:44:33,989 | INFO     | collected zombie processes
[2025-05-30 13:44:46] 2025-05-30 11:44:33,989 | INFO     | will attempt to kill all subprocesses of pid=2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:34,528 | INFO     | process IDs to be killed: [2487821] (in reverse order)
[2025-05-30 13:44:46] 2025-05-30 11:44:34,689 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 13:44:46] 2025-05-30 11:44:34,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 13:44:46] 2025-05-30 11:44:34,708 | INFO     | did not find any defunct processes belonging to 2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:34,723 | INFO     | did not find any defunct processes belonging to 2487821
[2025-05-30 13:44:46] 2025-05-30 11:44:34,723 | INFO     | ready for new job
[2025-05-30 13:44:46] 2025-05-30 11:44:34,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 13:44:46] 2025-05-30 11:44:34,725 | INFO     | **************************************
[2025-05-30 13:44:46] 2025-05-30 11:44:34,725 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 13:44:46] 2025-05-30 11:44:34,725 | INFO     | **************************************
[2025-05-30 13:44:46] 2025-05-30 11:44:34,725 | INFO     | 
[2025-05-30 13:44:46] 2025-05-30 11:44:34,733 | INFO     | architecture information:
[2025-05-30 13:44:46] 2025-05-30 11:44:34,733 | INFO     | executing command: cat /etc/os-release
[2025-05-30 13:44:46] 2025-05-30 11:44:34,748 | INFO     | cat /etc/os-release:
[2025-05-30 13:44:46] NAME="CentOS Linux"
[2025-05-30 13:44:46] VERSION="7 (Core)"
[2025-05-30 13:44:46] ID="centos"
[2025-05-30 13:44:46] ID_LIKE="rhel fedora"
[2025-05-30 13:44:46] VERSION_ID="7"
[2025-05-30 13:44:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 13:44:46] ANSI_COLOR="0;31"
[2025-05-30 13:44:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 13:44:46] HOME_URL="https://www.centos.org/"
[2025-05-30 13:44:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 13:44:46] 
[2025-05-30 13:44:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 13:44:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 13:44:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 13:44:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 13:44:46] 
[2025-05-30 13:44:46] 2025-05-30 11:44:34,748 | INFO     | **************************************
[2025-05-30 13:44:46] 2025-05-30 11:44:35,252 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2025-05-30 13:44:46] 2025-05-30 11:44:35,266 | INFO     | sufficient remaining disk space (3319547297792 B)
[2025-05-30 13:44:46] 2025-05-30 11:44:35,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 13:44:46] 2025-05-30 11:44:35,267 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 13:44:46] 2025-05-30 11:44:35,267 | INFO     | update_server=False
[2025-05-30 13:44:46] 2025-05-30 11:44:35,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 13:44:46] 2025-05-30 11:44:35,267 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 13:44:46] 2025-05-30 11:44:35,268 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 13:44:46] 2025-05-30 11:44:35,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 13:44:46] 2025-05-30 11:44:35,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 13:44:46] 2025-05-30 11:44:35,300 | INFO     | all data control threads have been joined
[2025-05-30 13:44:46] 2025-05-30 11:44:35,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 13:44:46] 2025-05-30 11:44:35,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 13:44:46] 2025-05-30 11:44:35,624 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 13:44:46] 2025-05-30 11:44:35,625 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 13:44:46] 2025-05-30 11:44:35,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:44:46] 2025-05-30 11:44:35,625 | INFO     | will abort loop
[2025-05-30 13:44:46] 2025-05-30 11:44:35,970 | INFO     | all job control threads have been joined
[2025-05-30 13:44:46] 2025-05-30 11:44:36,272 | INFO     | [job] retrieve thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,305 | INFO     | [data] control thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,513 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,630 | INFO     | [job] job monitor thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,681 | INFO     | all payload control threads have been joined
[2025-05-30 13:44:46] 2025-05-30 11:44:36,916 | INFO     | [job] validate thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,934 | INFO     | [data] copytool_in thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:36,975 | INFO     | [job] control thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,239 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,404 | INFO     | [payload] validate_post thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,426 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,475 | INFO     | [data] copytool_out thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:44:46] 2025-05-30 11:44:37,686 | INFO     | [payload] control thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:37,777 | INFO     | [payload] failed_post thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:38,604 | INFO     | [job] queue monitor thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:39,554 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 13:44:46] 2025-05-30 11:44:41,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23016175646528)>', '<ExcThread(monitor, started 23015939081984)>']
[2025-05-30 13:44:46] 2025-05-30 11:44:41,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 13:44:46] 2025-05-30 11:44:41,298 | INFO     | [monitor] control thread has ended
[2025-05-30 13:44:46] 2025-05-30 11:44:46,210 | INFO     | all workflow threads have been joined
[2025-05-30 13:44:46] 2025-05-30 11:44:46,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 13:44:46] 2025-05-30 11:44:46,211 | INFO     | traces error code: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:46,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 13:44:46] 2025-05-30 11:44:46,392 [wrapper] ==== pilot stdout END ====
[2025-05-30 13:44:46] 2025-05-30 11:44:46,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 13:44:46] 2025-05-30 11:44:46,396 [wrapper] pilotpid: 2480474
[2025-05-30 13:44:46] 2025-05-30 11:44:46,398 [wrapper] Pilot exit status: 0
[2025-05-30 13:44:46] 2025-05-30 11:44:46,410 [wrapper] pandaids: 6667928421
[2025-05-30 13:44:46] 2025-05-30 11:44:46,496 [wrapper] cleanup supervisor_pilot 3022640 2480475
[2025-05-30 13:44:46] 2025-05-30 11:44:46,499 [wrapper] Test setup, not cleaning
[2025-05-30 13:44:46] 2025-05-30 11:44:46,503 [wrapper] apfmon messages muted
[2025-05-30 13:44:46] 2025-05-30 11:44:46,506 [wrapper] ==== wrapper stdout END ====
[2025-05-30 13:44:46] 2025-05-30 11:44:46,509 [wrapper] ==== wrapper stderr END ====
[2025-05-30 13:44:46]  *** Error codes and diagnostics ***
[2025-05-30 13:44:46]     "exeErrorCode": 0,
[2025-05-30 13:44:46]     "exeErrorDiag": "",
[2025-05-30 13:44:46]     "pilotErrorCode": 0,
[2025-05-30 13:44:46]     "pilotErrorDiag": "",
[2025-05-30 13:44:46]  *** Listing of results directory ***
[2025-05-30 13:44:46] total 420948
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc    495897 May 28 05:41 pilot3.tar.gz
[2025-05-30 13:44:46] -rwx------ 1 boinc boinc     37140 May 28 06:18 runpilot2-wrapper.sh
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc      5111 May 28 06:18 queuedata.json
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc       100 May 30 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 13:44:46] -rwxr-xr-x 1 boinc boinc      7986 May 30 11:23 run_atlas
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc       105 May 30 11:23 job.xml
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc 224531720 May 30 11:23 EVNT.44871834._003072.pool.root.1
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc      6677 May 30 11:23 init_data.xml
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc     15093 May 30 11:23 start_atlas.sh
[2025-05-30 13:44:46] drwxrwx--x 2 boinc boinc      4096 May 30 11:23 shared
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc    508879 May 30 11:23 input.tar.gz
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc         0 May 30 11:23 boinc_lockfile
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc      2559 May 30 11:23 pandaJob.out
[2025-05-30 13:44:46] -rw------- 1 boinc boinc    992145 May 30 11:24 agis_schedconf.cvmfs.json
[2025-05-30 13:44:46] -rw------- 1 boinc boinc   1603667 May 30 11:24 agis_ddmendpoints.agis.ALL.json
[2025-05-30 13:44:46] drwx------ 4 boinc boinc      4096 May 30 11:24 pilot3
[2025-05-30 13:44:46] -rw------- 1 boinc boinc        95 May 30 13:43 pilot_heartbeat.json
[2025-05-30 13:44:46] -rw------- 1 boinc boinc 200541616 May 30 13:43 HITS.44871837._078580.pool.root.1
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc       529 May 30 13:43 boinc_task_state.xml
[2025-05-30 13:44:46] -rw------- 1 boinc boinc      1024 May 30 13:44 memory_monitor_summary.json
[2025-05-30 13:44:46] -rw------- 1 boinc boinc    279870 May 30 13:44 log.44871837._078580.job.log.tgz.1
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc      8192 May 30 13:44 boinc_mmap_file
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc        27 May 30 13:44 wrapper_checkpoint.txt
[2025-05-30 13:44:46] -rw------- 1 boinc boinc      7690 May 30 13:44 heartbeat.json
[2025-05-30 13:44:46] -rw------- 1 boinc boinc      4673 May 30 13:44 pilotlog.txt
[2025-05-30 13:44:46] -rw------- 1 boinc boinc    784862 May 30 13:44 log.44871837._078580.job.log.1
[2025-05-30 13:44:46] -rw------- 1 boinc boinc       357 May 30 13:44 output.list
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc       620 May 30 13:44 runtime_log
[2025-05-30 13:44:46] -rw------- 1 boinc boinc   1085440 May 30 13:44 result.tar.gz
[2025-05-30 13:44:46] -rw------- 1 boinc boinc       662 May 30 13:44 wBQLDmNQNe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDFbKDm1FetNo.diag
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc      9025 May 30 13:44 runtime_log.err
[2025-05-30 13:44:46] -rw-r--r-- 1 boinc boinc     20958 May 30 13:44 stderr.txt
[2025-05-30 13:44:46] HITS file was successfully produced:
[2025-05-30 13:44:46] -rw------- 1 boinc boinc 200541616 May 30 13:43 shared/HITS.pool.root.1
[2025-05-30 13:44:46]  *** Contents of shared directory: ***
[2025-05-30 13:44:46] total 416700
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc 224531720 May 30 11:23 ATLAS.root_0
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc     15093 May 30 11:23 start_atlas.sh
[2025-05-30 13:44:46] -rw-r--r-- 2 boinc boinc    508879 May 30 11:23 input.tar.gz
[2025-05-30 13:44:46] -rw------- 1 boinc boinc 200541616 May 30 13:43 HITS.pool.root.1
[2025-05-30 13:44:46] -rw------- 1 boinc boinc   1085440 May 30 13:44 result.tar.gz
13:44:48 (2476519): run_atlas exited; CPU time 32464.086709
13:44:48 (2476519): called boinc_finish(0)

</stderr_txt>
]]>

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