Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:38:46 (3256180): wrapper (7.7.26015): starting
02:38:46 (3256180): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 02:38:46] Arguments: --nthreads 12
[2025-05-28 02:38:46] Threads: 12
[2025-05-28 02:38:46] Checking for CVMFS
[2025-05-28 02:38:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 02:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 02:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 02:38:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 02:38:48] 2.11.5.0 2876 40644 202884 146513 0 206 38222048 45568000 27075 130560 0 310224866 99.771 224496329 22063 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 02:38:48] CVMFS is ok
[2025-05-28 02:38:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 02:38:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 02:38:48] Further information can be found at the LHC@home message board.
[2025-05-28 02:38:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 02:38:48] Checking for apptainer binary...
[2025-05-28 02:38:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 02:38:48] Running /usr/bin/apptainer --version
[2025-05-28 02:38:48] apptainer version 1.4.0-1.el9
[2025-05-28 02:38:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 02:38:49] wns0154.triumf.lcg
[2025-05-28 02:38:49] apptainer works
[2025-05-28 02:38:49] Set ATHENA_PROC_NUMBER=12
[2025-05-28 02:38:49] Set ATHENA_CORE_NUMBER=12
[2025-05-28 02:38:49] Starting ATLAS job with PandaID=6668191807
[2025-05-28 02:38:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 02:44:20]  *** The last 200 lines of the pilot log: ***
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard info from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | wrong length of table data, x=[1748425248.0], y=[1546.0] (must be same and length>=4)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . Timing measurements:
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . get job = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . initial setup = 3 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload setup = 23 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-in = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload execution = 66 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-out = 1 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . log creation = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668191807/pilotlog.txt
[2025-05-28 02:44:20] 2025-05-28 09:44:03,440 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 02:44:20] - Log from pilotlog.txt -
[2025-05-28 02:44:20] 2025-05-28 09:44:03,335 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 02:44:20] 2025-05-28 09:44:03,336 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6668191807/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard info from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | wrong length of table data, x=[1748425248.0], y=[1546.0] (must be same and length>=4)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . Timing measurements:
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . get job = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . initial setup = 3 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload setup = 23 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-in = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload execution = 66 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-out = 1 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . log creation = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668191807/pilotlog.txt
[2025-05-28 02:44:20] 2025-05-28 09:44:03,441 | WARNING  | 
[2025-05-28 02:44:20] [begin log extracts]
[2025-05-28 02:44:20] - Log from pilotlog.txt -
[2025-05-28 02:44:20] 2025-05-28 09:44:03,335 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 02:44:20] 2025-05-28 09:44:03,336 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6668191807/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard info from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 02:44:20] 2025-05-28 09:44:03,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | WARNING  | wrong length of table data, x=[1748425248.0], y=[1546.0] (must be same and length>=4)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,338 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . Timing measurements:
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . get job = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . initial setup = 3 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload setup = 23 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-in = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . payload execution = 66 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . stage-out = 1 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | . log creation = 0 s
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | ..............................
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 02:44:20] 2025-05-28 09:44:03,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6668191807/pilotlog.txt
[2025-05-28 02:44:20] [end log extracts]
[2025-05-28 02:44:20] 2025-05-28 09:44:03,441 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 02:44:20] 2025-05-28 09:44:03,457 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | 
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | job summary report
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | --------------------------------------------------
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | PanDA job id: 6668191807
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | task id: 44871837
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 02:41:28,292 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 02:44:20] 2025-05-28 09:44:04,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | pilot state: failed 
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | transexitcode: 65
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | exeerrorcode: 65
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | exitcode: 65
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | cpuconsumptiontime: 20 s
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | nevents: 0
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | neventsw: 0
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | pid: 3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | pgrp: 3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | corecount: 12
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | event service: False
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | sizes: {0: 2405004, 1: 2405088, 2: 2405088, 3: 2405287, 14: 2405287, 15: 2405521, 25: 2405677, 93: 2428894, 96: 2433129, 99: 2433157, 236: 2433299}
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | --------------------------------------------------
[2025-05-28 02:44:20] 2025-05-28 09:44:04,440 | INFO     | 
[2025-05-28 02:44:20] 2025-05-28 09:44:04,441 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 02:44:20] 2025-05-28 09:44:04,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | job 6668191807 has completed (purged errors)
[2025-05-28 02:44:20] 2025-05-28 09:44:04,546 | INFO     | overall cleanup function is called
[2025-05-28 02:44:20] 2025-05-28 09:44:05,142 | INFO     | PID=3262896 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-28 02:44:20] 2025-05-28 09:44:05,142 | INFO     | .. there are 35 such processes running
[2025-05-28 02:44:20] 2025-05-28 09:44:05,565 | INFO     | --- collectZombieJob: --- 10, [3271343]
[2025-05-28 02:44:20] 2025-05-28 09:44:05,565 | INFO     | zombie collector waiting for pid 3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:05,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 02:44:20] 2025-05-28 09:44:05,565 | INFO     | collected zombie processes
[2025-05-28 02:44:20] 2025-05-28 09:44:05,565 | INFO     | will attempt to kill all subprocesses of pid=3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:06,369 | INFO     | process IDs to be killed: [3271343] (in reverse order)
[2025-05-28 02:44:20] 2025-05-28 09:44:06,519 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 02:44:20] 2025-05-28 09:44:06,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 02:44:20] 2025-05-28 09:44:06,531 | INFO     | did not find any defunct processes belonging to 3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:06,541 | INFO     | did not find any defunct processes belonging to 3271343
[2025-05-28 02:44:20] 2025-05-28 09:44:06,542 | INFO     | ready for new job
[2025-05-28 02:44:20] 2025-05-28 09:44:06,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 02:44:20] 2025-05-28 09:44:06,543 | INFO     | **************************************
[2025-05-28 02:44:20] 2025-05-28 09:44:06,543 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 02:44:20] 2025-05-28 09:44:06,544 | INFO     | **************************************
[2025-05-28 02:44:20] 2025-05-28 09:44:06,544 | INFO     | 
[2025-05-28 02:44:20] 2025-05-28 09:44:06,546 | INFO     | architecture information:
[2025-05-28 02:44:20] 2025-05-28 09:44:06,546 | INFO     | executing command: cat /etc/os-release
[2025-05-28 02:44:20] 2025-05-28 09:44:06,562 | INFO     | cat /etc/os-release:
[2025-05-28 02:44:20] NAME="CentOS Linux"
[2025-05-28 02:44:20] VERSION="7 (Core)"
[2025-05-28 02:44:20] ID="centos"
[2025-05-28 02:44:20] ID_LIKE="rhel fedora"
[2025-05-28 02:44:20] VERSION_ID="7"
[2025-05-28 02:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 02:44:20] ANSI_COLOR="0;31"
[2025-05-28 02:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 02:44:20] HOME_URL="https://www.centos.org/"
[2025-05-28 02:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 02:44:20] 
[2025-05-28 02:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 02:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 02:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 02:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 02:44:20] 
[2025-05-28 02:44:20] 2025-05-28 09:44:06,562 | INFO     | **************************************
[2025-05-28 02:44:20] 2025-05-28 09:44:07,066 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | INFO     | sufficient remaining disk space (1505048395776 B)
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | INFO     | update_server=False
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 02:44:20] 2025-05-28 09:44:07,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 02:44:20] 2025-05-28 09:44:07,144 | INFO     | aborting loop
[2025-05-28 02:44:20] 2025-05-28 09:44:07,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 02:44:20] 2025-05-28 09:44:07,149 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 02:44:20] 2025-05-28 09:44:07,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 02:44:20] 2025-05-28 09:44:07,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 02:44:20] 2025-05-28 09:44:07,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 02:44:20] 2025-05-28 09:44:07,807 | INFO     | all data control threads have been joined
[2025-05-28 02:44:20] 2025-05-28 09:44:08,151 | INFO     | [job] retrieve thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,151 | INFO     | [job] job monitor thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,213 | INFO     | all payload control threads have been joined
[2025-05-28 02:44:20] 2025-05-28 09:44:08,278 | INFO     | [payload] validate_post thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,526 | INFO     | all job control threads have been joined
[2025-05-28 02:44:20] 2025-05-28 09:44:08,685 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,685 | INFO     | [job] validate thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,707 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,813 | INFO     | [data] control thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:08,943 | INFO     | [payload] failed_post thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:09,155 | INFO     | [data] copytool_out thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:09,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 02:44:20] 2025-05-28 09:44:09,219 | INFO     | [payload] control thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:09,364 | INFO     | [data] copytool_in thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:09,434 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:09,536 | INFO     | [job] control thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:10,205 | INFO     | [job] queue monitor thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:11,769 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 02:44:20] 2025-05-28 09:44:13,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562028910400)>', '<ExcThread(monitor, started 140561193367296)>']
[2025-05-28 02:44:20] 2025-05-28 09:44:14,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 02:44:20] 2025-05-28 09:44:14,193 | INFO     | [monitor] control thread has ended
[2025-05-28 02:44:20] 2025-05-28 09:44:18,784 | INFO     | all workflow threads have been joined
[2025-05-28 02:44:20] 2025-05-28 09:44:18,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 02:44:20] 2025-05-28 09:44:18,784 | INFO     | traces error code: 0
[2025-05-28 02:44:20] 2025-05-28 09:44:18,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 02:44:20] 2025-05-28 09:44:19,283 [wrapper] ==== pilot stdout END ====
[2025-05-28 02:44:20] 2025-05-28 09:44:19,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 02:44:20] 2025-05-28 09:44:19,329 [wrapper] pilotpid: 3262896
[2025-05-28 02:44:20] 2025-05-28 09:44:19,357 [wrapper] Pilot exit status: 0
[2025-05-28 02:44:20] 2025-05-28 09:44:19,470 [wrapper] pandaids: 6668191807
[2025-05-28 02:44:20] 2025-05-28 09:44:19,531 [wrapper] cleanup supervisor_pilot 3262902 3262897
[2025-05-28 02:44:20] 2025-05-28 09:44:19,533 [wrapper] Test setup, not cleaning
[2025-05-28 02:44:20] 2025-05-28 09:44:19,535 [wrapper] apfmon messages muted
[2025-05-28 02:44:20] 2025-05-28 09:44:19,538 [wrapper] ==== wrapper stdout END ====
[2025-05-28 02:44:20] 2025-05-28 09:44:19,540 [wrapper] ==== wrapper stderr END ====
[2025-05-28 02:44:20]  *** Error codes and diagnostics ***
[2025-05-28 02:44:20]     "exeErrorCode": 65,
[2025-05-28 02:44:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 02:44:20]     "pilotErrorCode": 1305,
[2025-05-28 02:44:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 02:44:20]  *** Listing of results directory ***
[2025-05-28 02:44:20] total 222704
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc    495897 May 27 22:33 pilot3.tar.gz
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc      5111 May 27 23:22 queuedata.json
[2025-05-28 02:44:20] -rwx------. 1 boinc boinc     37140 May 27 23:23 runpilot2-wrapper.sh
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc       100 May 28 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 02:44:20] -rwxr-xr-x. 1 boinc boinc      7986 May 28 02:38 run_atlas
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc       105 May 28 02:38 job.xml
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc 223999319 May 28 02:38 EVNT.44871834._003125.pool.root.1
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc      6598 May 28 02:38 init_data.xml
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc     15093 May 28 02:38 start_atlas.sh
[2025-05-28 02:44:20] drwxrwx--x. 2 boinc boinc      4096 May 28 02:38 shared
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc    508886 May 28 02:38 input.tar.gz
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc         0 May 28 02:38 boinc_lockfile
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc      2559 May 28 02:38 pandaJob.out
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc    991351 May 28 02:39 agis_schedconf.cvmfs.json
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc   1603667 May 28 02:39 agis_ddmendpoints.agis.ALL.json
[2025-05-28 02:44:20] drwx------. 4 boinc boinc      4096 May 28 02:39 pilot3
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc       524 May 28 02:41 boinc_task_state.xml
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc       953 May 28 02:41 memory_monitor_summary.json
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc     21830 May 28 02:41 log.44871837._080033.job.log.tgz.1
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc        95 May 28 02:43 pilot_heartbeat.json
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc      8334 May 28 02:44 heartbeat.json
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc      8192 May 28 02:44 boinc_mmap_file
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc      4352 May 28 02:44 pilotlog.txt
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc        23 May 28 02:44 wrapper_checkpoint.txt
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc     81073 May 28 02:44 log.44871837._080033.job.log.1
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc       188 May 28 02:44 output.list
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc       620 May 28 02:44 runtime_log
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc    122880 May 28 02:44 result.tar.gz
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc       645 May 28 02:44 vllNDmCNPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmc3SKDmiPyUOn.diag
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc      8484 May 28 02:44 runtime_log.err
[2025-05-28 02:44:20] -rw-r--r--. 1 boinc boinc     21742 May 28 02:44 stderr.txt
[2025-05-28 02:44:20] No HITS result produced
[2025-05-28 02:44:20]  *** Contents of shared directory: ***
[2025-05-28 02:44:20] total 219392
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc 223999319 May 28 02:38 ATLAS.root_0
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc     15093 May 28 02:38 start_atlas.sh
[2025-05-28 02:44:20] -rw-r--r--. 2 boinc boinc    508886 May 28 02:38 input.tar.gz
[2025-05-28 02:44:20] -rw-------. 1 boinc boinc    122880 May 28 02:44 result.tar.gz
02:44:21 (3256180): run_atlas exited; CPU time 32.457283
02:44:21 (3256180): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN